RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 PARP3Q9Y6F1 533 aa11.43□□□□□ -0.58
ATL1-202ENST00000441560 TUBB4AP04350 444 aa11.43□□□□□ -0.58
ATL1-202ENST00000441560 PRKAR2BP31323 418 aa11.43□□□□□ -0.58
ATL1-202ENST00000441560 INHBEP58166 350 aa11.43□□□□□ -0.58
ATL1-202ENST00000441560 STX1AQ16623 288 aa11.43□□□□□ -0.58
ATL1-202ENST00000441560 C11orf91Q3C1V1 193 aa11.43□□□□□ -0.58
ATL1-202ENST00000441560 LEO1Q8WVC0 666 aaPredicted RBP11.43□□□□□ -0.58
ATL1-202ENST00000441560 KAT2BQ92831 832 aa11.43□□□□□ -0.58
ATL1-202ENST00000441560 IL17RAQ96F46 866 aa11.43□□□□□ -0.58
ATL1-202ENST00000441560 OSBPL5Q9H0X9 879 aaPredicted RBP11.43□□□□□ -0.58
ATL1-202ENST00000441560 A0A087WUV0 522 aaPredicted RBP11.42□□□□□ -0.58
ATL1-202ENST00000441560 DIAPH1O60610 1272 aaKnown RBP11.42□□□□□ -0.58
ATL1-202ENST00000441560 LIG3P49916 1009 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 GNAI1P63096 354 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 ISM2Q6H9L7 571 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 AOPEPQ8N6M6 819 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 BICC1Q9H694 974 aaKnown RBP11.42□□□□□ -0.58
ATL1-202ENST00000441560 HYPKQ9NX55 129 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 TTC41PQ6P2S7 1318 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 ADGRF5Q8IZF2 1346 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 TTC21AQ8NDW8 1320 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 MSH6P52701 1360 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 KLHL33A6NCF5 533 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 ERLIN2O94905 339 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 CLSTN1O94985 981 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 DHX40Q8IX18 779 aaKnown RBP11.42□□□□□ -0.58
ATL1-202ENST00000441560 PRPF38AQ8NAV1 312 aaKnown RBP11.42□□□□□ -0.58
ATL1-202ENST00000441560 CCDC150Q8NCX0 1101 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 DDX54Q8TDD1 881 aaKnown RBP11.42□□□□□ -0.58
ATL1-202ENST00000441560 SPHKAPQ2M3C7 1700 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 KIF3CO14782 793 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 MAP4K4O95819 1239 aaPredicted RBP11.42□□□□□ -0.58
ATL1-202ENST00000441560 TRIM65Q6PJ69 517 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 PGBD1Q96JS3 809 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 ZSWIM4Q9H7M6 989 aa11.42□□□□□ -0.58
ATL1-202ENST00000441560 KIF24Q5T7B8 1368 aa11.41□□□□□ -0.58
ATL1-202ENST00000441560 EVC2Q86UK5 1308 aa11.41□□□□□ -0.58
ATL1-202ENST00000441560 PPP2R3AQ06190 1150 aa11.41□□□□□ -0.58
ATL1-202ENST00000441560 FBXW10Q5XX13 1052 aa11.41□□□□□ -0.58
ATL1-202ENST00000441560 CNNM3Q8NE01 707 aa11.41□□□□□ -0.58
ATL1-202ENST00000441560 GIMAP7Q8NHV1 300 aa11.41□□□□□ -0.58
ATL1-202ENST00000441560 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
ATL1-202ENST00000441560 MAP2K7O14733 419 aa11.41□□□□□ -0.58
ATL1-202ENST00000441560 HNRNPH1P31943 449 aaKnown RBP11.41□□□□□ -0.58
ATL1-202ENST00000441560 WWC2Q6AWC2 1192 aa11.41□□□□□ -0.58
ATL1-202ENST00000441560 TBC1D22AQ8WUA7 517 aa11.41□□□□□ -0.58
ATL1-202ENST00000441560 ERCC4Q92889 916 aaPredicted RBP11.41□□□□□ -0.58
ATL1-202ENST00000441560 CCDC102AQ96A19 550 aa11.41□□□□□ -0.58
ATL1-202ENST00000441560 FAXDC2Q96IV6 333 aa11.41□□□□□ -0.58
ATL1-202ENST00000441560 IMPACTQ9P2X3 320 aa11.41□□□□□ -0.58
ATL1-202ENST00000441560 CCDC151A5D8V7 595 aa11.4□□□□□ -0.58
ATL1-202ENST00000441560 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
ATL1-202ENST00000441560 PAX7P23759 505 aa11.4□□□□□ -0.58
ATL1-202ENST00000441560 NBPF5PQ86XG9 351 aaPredicted RBP11.4□□□□□ -0.58
ATL1-202ENST00000441560 MIEF2Q96C03 454 aa11.4□□□□□ -0.58
ATL1-202ENST00000441560 PHACTR3Q96KR7 559 aa11.4□□□□□ -0.58
ATL1-202ENST00000441560 TERF2IPQ9NYB0 399 aa11.4□□□□□ -0.58
ATL1-202ENST00000441560 TTC36A6NLP5 189 aa11.4□□□□□ -0.58
ATL1-202ENST00000441560 PPFIA4O75335 1185 aa11.4□□□□□ -0.58
ATL1-202ENST00000441560 ARID4AP29374 1257 aaPredicted RBP11.4□□□□□ -0.58
ATL1-202ENST00000441560 HSP90B2PQ58FF3 399 aa11.4□□□□□ -0.58
ATL1-202ENST00000441560 RABGGTAQ92696 567 aa11.4□□□□□ -0.58
ATL1-202ENST00000441560 JPH2Q9BR39 696 aaPredicted RBP11.4□□□□□ -0.58
ATL1-202ENST00000441560 LRRCC1Q9C099 1032 aa11.4□□□□□ -0.58
ATL1-202ENST00000441560 XPO4Q9C0E2 1151 aaKnown RBP11.4□□□□□ -0.58
ATL1-202ENST00000441560 IFNKQ9P0W0 207 aa11.4□□□□□ -0.58
ATL1-202ENST00000441560 HMOX1P09601 288 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 EIF5P55010 431 aaKnown RBP11.39□□□□□ -0.59
ATL1-202ENST00000441560 CEBPZQ03701 1054 aaKnown RBP11.39□□□□□ -0.59
ATL1-202ENST00000441560 ST3GAL1Q11201 340 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 ZKSCAN8Q15776 578 aaPredicted RBP11.39□□□□□ -0.59
ATL1-202ENST00000441560 ME3Q16798 604 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 VPS53Q5VIR6 699 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 SUGCTQ9HAC7 445 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 YTHDC2Q9H6S0 1430 aaKnown RBP11.39□□□□□ -0.59
ATL1-202ENST00000441560 MAST1Q9Y2H9 1570 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 CCP110O43303 1012 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 EIF3JO75822 258 aaKnown RBP11.39□□□□□ -0.59
ATL1-202ENST00000441560 USP8P40818 1118 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 GBP6Q6ZN66 633 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 RSRC2Q7L4I2 434 aaKnown RBP11.39□□□□□ -0.59
ATL1-202ENST00000441560 HDXQ7Z353 690 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 CEP57L1Q8IYX8 460 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 ZNF513Q8N8E2 541 aaPredicted RBP11.39□□□□□ -0.59
ATL1-202ENST00000441560 JAKMIP1Q96N16 626 aaKnown RBP11.39□□□□□ -0.59
ATL1-202ENST00000441560 SPG7Q9UQ90 795 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 SBNO2Q9Y2G9 1366 aa11.39□□□□□ -0.59
ATL1-202ENST00000441560 TXLNAP40222 546 aa11.38□□□□□ -0.59
ATL1-202ENST00000441560 RBM5P52756 815 aaKnown RBP eCLIP11.38□□□□□ -0.59
ATL1-202ENST00000441560 KCNV1Q6PIU1 500 aa11.38□□□□□ -0.59
ATL1-202ENST00000441560 GOLGA1Q92805 767 aa11.38□□□□□ -0.59
ATL1-202ENST00000441560 FMNL2Q96PY5 1086 aa11.38□□□□□ -0.59
ATL1-202ENST00000441560 SH2B1Q9NRF2 756 aaPredicted RBP11.38□□□□□ -0.59
ATL1-202ENST00000441560 SALL3Q9BXA9 1300 aa11.38□□□□□ -0.59
ATL1-202ENST00000441560 FCHSD2O94868 740 aa11.38□□□□□ -0.59
ATL1-202ENST00000441560 KCNJ6P48051 423 aa11.38□□□□□ -0.59
ATL1-202ENST00000441560 GNG11P61952 73 aa11.38□□□□□ -0.59
ATL1-202ENST00000441560 JAKMIP3Q5VZ66 844 aa11.38□□□□□ -0.59
ATL1-202ENST00000441560 CPLX2Q6PUV4 134 aaKnown RBP11.38□□□□□ -0.59
ATL1-202ENST00000441560 UTP14AQ9BVJ6 771 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms