RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 THRAP3Q9Y2W1 955 aaKnown RBP7.05□□□□□ -1.28
PTPN4-206ENST00000441089 NUP155O75694 1391 aa7.05□□□□□ -1.28
PTPN4-206ENST00000441089 GPRASP1Q5JY77 1395 aa7.05□□□□□ -1.28
PTPN4-206ENST00000441089 PPLO60437 1756 aa7.05□□□□□ -1.28
PTPN4-206ENST00000441089 RPGRIP1LQ68CZ1 1315 aa7.04□□□□□ -1.28
PTPN4-206ENST00000441089 TOPAZ1Q8N9V7 1692 aa7.04□□□□□ -1.28
PTPN4-206ENST00000441089 MAGEB6P1A0A0J9YX57 407 aa7.04□□□□□ -1.28
PTPN4-206ENST00000441089 ITGA6P23229 1130 aa7.04□□□□□ -1.28
PTPN4-206ENST00000441089 PPP1R26Q5T8A7 1209 aaPredicted RBP7.04□□□□□ -1.28
PTPN4-206ENST00000441089 WAPLQ7Z5K2 1190 aa7.04□□□□□ -1.28
PTPN4-206ENST00000441089 PARP9Q8IXQ6 854 aa7.04□□□□□ -1.28
PTPN4-206ENST00000441089 JMYQ8N9B5 988 aa7.04□□□□□ -1.28
PTPN4-206ENST00000441089 WWC3Q9ULE0 1092 aa7.04□□□□□ -1.28
PTPN4-206ENST00000441089 AKAP12Q02952 1782 aa7.04□□□□□ -1.28
PTPN4-206ENST00000441089 ADCY9O60503 1353 aa7.04□□□□□ -1.28
PTPN4-206ENST00000441089 COL24A1Q17RW2 1714 aa7.04□□□□□ -1.28
PTPN4-206ENST00000441089 SSH2Q76I76 1423 aa7.03□□□□□ -1.28
PTPN4-206ENST00000441089 CDC14CA4D256 554 aa7.03□□□□□ -1.28
PTPN4-206ENST00000441089 TXNRD1Q16881 649 aa7.03□□□□□ -1.28
PTPN4-206ENST00000441089 ERFEQ4G0M1 354 aa7.03□□□□□ -1.28
PTPN4-206ENST00000441089 RIC3Q7Z5B4 369 aa7.03□□□□□ -1.28
PTPN4-206ENST00000441089 ZNF526Q8TF50 670 aaPredicted RBP7.03□□□□□ -1.28
PTPN4-206ENST00000441089 KLRG1Q96E93 195 aa7.03□□□□□ -1.28
PTPN4-206ENST00000441089 AK7Q96M32 723 aa7.03□□□□□ -1.28
PTPN4-206ENST00000441089 CARD14Q9BXL6 1004 aa7.03□□□□□ -1.28
PTPN4-206ENST00000441089 CUEDC1Q9NWM3 386 aaPredicted RBP7.03□□□□□ -1.28
PTPN4-206ENST00000441089 EMILIN1Q9Y6C2 1016 aa7.03□□□□□ -1.28
PTPN4-206ENST00000441089 KIAA0232Q92628 1395 aa7.03□□□□□ -1.28
PTPN4-206ENST00000441089 ABCC11Q96J66 1382 aa7.03□□□□□ -1.28
PTPN4-206ENST00000441089 QSER1Q2KHR3 1735 aa7.02□□□□□ -1.29
PTPN4-206ENST00000441089 ARHGEF28Q8N1W1 1705 aaKnown RBP7.02□□□□□ -1.29
PTPN4-206ENST00000441089 SLC24A1O60721 1099 aa7.02□□□□□ -1.29
PTPN4-206ENST00000441089 TOMM70O94826 608 aa7.02□□□□□ -1.29
PTPN4-206ENST00000441089 GAS6Q14393 721 aa7.02□□□□□ -1.29
PTPN4-206ENST00000441089 TSC1Q92574 1164 aa7.02□□□□□ -1.29
PTPN4-206ENST00000441089 STK26Q9P289 416 aa7.02□□□□□ -1.29
PTPN4-206ENST00000441089 ATP7BP35670 1465 aa7.02□□□□□ -1.29
PTPN4-206ENST00000441089 ANKARQ7Z5J8 1434 aa7.01□□□□□ -1.29
PTPN4-206ENST00000441089 PHRF1Q9P1Y6 1649 aaKnown RBP7.01□□□□□ -1.29
PTPN4-206ENST00000441089 TRIM66O15016 1216 aa7.01□□□□□ -1.29
PTPN4-206ENST00000441089 YBX3P16989 372 aaKnown RBP eCLIP7.01□□□□□ -1.29
PTPN4-206ENST00000441089 CHRNA2Q15822 529 aa7.01□□□□□ -1.29
PTPN4-206ENST00000441089 INSM2Q96T92 566 aaPredicted RBP7.01□□□□□ -1.29
PTPN4-206ENST00000441089 BCL9O00512 1426 aa7.01□□□□□ -1.29
PTPN4-206ENST00000441089 DDB1Q16531 1140 aa7□□□□□ -1.29
PTPN4-206ENST00000441089 RTL5Q5HYW3 569 aaPredicted RBP7□□□□□ -1.29
PTPN4-206ENST00000441089 PRPF38BQ5VTL8 546 aaKnown RBP7□□□□□ -1.29
PTPN4-206ENST00000441089 NLGN2Q8NFZ4 835 aa7□□□□□ -1.29
PTPN4-206ENST00000441089 PMFBP1Q8TBY8 1022 aa7□□□□□ -1.29
PTPN4-206ENST00000441089 SIRT1Q96EB6 747 aa7□□□□□ -1.29
PTPN4-206ENST00000441089 ROCK1Q13464 1354 aa6.99□□□□□ -1.29
PTPN4-206ENST00000441089 ANKRD30BQ9BXX2 1392 aa6.99□□□□□ -1.29
PTPN4-206ENST00000441089 RAB3GAP2Q9H2M9 1393 aa6.99□□□□□ -1.29
PTPN4-206ENST00000441089 PLEKHH1Q9ULM0 1364 aa6.99□□□□□ -1.29
PTPN4-206ENST00000441089 LRRC37A3O60309 1634 aa6.99□□□□□ -1.29
PTPN4-206ENST00000441089 LARP1Q6PKG0 1096 aaKnown RBP6.99□□□□□ -1.29
PTPN4-206ENST00000441089 RNF217Q8TC41 542 aa6.99□□□□□ -1.29
PTPN4-206ENST00000441089 OCSTAMPQ9BR26 566 aa6.99□□□□□ -1.29
PTPN4-206ENST00000441089 ACIN1Q9UKV3 1341 aaKnown RBP6.99□□□□□ -1.29
PTPN4-206ENST00000441089 PAPPAQ13219 1627 aa6.98□□□□□ -1.29
PTPN4-206ENST00000441089 EIF3AQ14152 1382 aaKnown RBP6.98□□□□□ -1.29
PTPN4-206ENST00000441089 TULP4Q9NRJ4 1543 aa6.98□□□□□ -1.29
PTPN4-206ENST00000441089 LILRB3O75022 631 aa6.98□□□□□ -1.29
PTPN4-206ENST00000441089 IGHA1P01876 353 aa6.98□□□□□ -1.29
PTPN4-206ENST00000441089 CELA2BP08218 269 aaPredicted RBP6.98□□□□□ -1.29
PTPN4-206ENST00000441089 ZC3H6P61129 1189 aaKnown RBP6.98□□□□□ -1.29
PTPN4-206ENST00000441089 RELBQ01201 579 aa6.98□□□□□ -1.29
PTPN4-206ENST00000441089 PLA2G4EQ3MJ16 856 aa6.98□□□□□ -1.29
PTPN4-206ENST00000441089 FOXD4L5Q5VV16 416 aaPredicted RBP6.98□□□□□ -1.29
PTPN4-206ENST00000441089 MYSM1Q5VVJ2 828 aa6.98□□□□□ -1.29
PTPN4-206ENST00000441089 SV2AQ7L0J3 742 aa6.98□□□□□ -1.29
PTPN4-206ENST00000441089 KDF1Q8NAX2 398 aaPredicted RBP6.98□□□□□ -1.29
PTPN4-206ENST00000441089 LMO7Q8WWI1 1683 aa6.97□□□□□ -1.29
PTPN4-206ENST00000441089 WNK3Q9BYP7 1800 aa6.97□□□□□ -1.29
PTPN4-206ENST00000441089 ADAM23O75077 832 aa6.97□□□□□ -1.29
PTPN4-206ENST00000441089 MARSP56192 900 aaKnown RBP6.97□□□□□ -1.29
PTPN4-206ENST00000441089 CRB1P82279 1406 aa6.97□□□□□ -1.29
PTPN4-206ENST00000441089 DIXDC1Q155Q3 683 aa6.97□□□□□ -1.29
PTPN4-206ENST00000441089 KANK3Q6NY19 840 aa6.97□□□□□ -1.29
PTPN4-206ENST00000441089 PTF1AQ7RTS3 328 aa6.97□□□□□ -1.29
PTPN4-206ENST00000441089 CDCA7Q9BWT1 371 aaPredicted RBP6.97□□□□□ -1.29
PTPN4-206ENST00000441089 KRTAP4-8Q9BYQ9 185 aa6.97□□□□□ -1.29
PTPN4-206ENST00000441089 YTHDC2Q9H6S0 1430 aaKnown RBP6.97□□□□□ -1.29
PTPN4-206ENST00000441089 ZNF395Q9H8N7 513 aaPredicted RBP6.97□□□□□ -1.29
PTPN4-206ENST00000441089 CNTNAP5Q8WYK1 1306 aa6.97□□□□□ -1.29
PTPN4-206ENST00000441089 PROCP04070 461 aa6.96□□□□□ -1.3
PTPN4-206ENST00000441089 INTS6LQ5JSJ4 861 aaKnown RBP6.96□□□□□ -1.3
PTPN4-206ENST00000441089 NGDNQ8NEJ9 315 aaKnown RBP6.96□□□□□ -1.3
PTPN4-206ENST00000441089 ITSN1Q15811 1721 aa6.96□□□□□ -1.3
PTPN4-206ENST00000441089 BRD4O60885 1362 aaPredicted RBP6.95□□□□□ -1.3
PTPN4-206ENST00000441089 CPDO75976 1380 aa6.95□□□□□ -1.3
PTPN4-206ENST00000441089 PDE4DQ08499 809 aa6.95□□□□□ -1.3
PTPN4-206ENST00000441089 FSTL1Q12841 308 aa6.95□□□□□ -1.3
PTPN4-206ENST00000441089 C16orf71Q8IYS4 520 aaPredicted RBP6.95□□□□□ -1.3
PTPN4-206ENST00000441089 DCAF5Q96JK2 942 aa6.95□□□□□ -1.3
PTPN4-206ENST00000441089 KCTD15Q96SI1 283 aaPredicted RBP6.95□□□□□ -1.3
PTPN4-206ENST00000441089 SPOCK3Q9BQ16 436 aa6.95□□□□□ -1.3
PTPN4-206ENST00000441089 SLC24A3Q9HC58 644 aa6.95□□□□□ -1.3
PTPN4-206ENST00000441089 TMPRSS4Q9NRS4 437 aa6.95□□□□□ -1.3
PTPN4-206ENST00000441089 NHSQ6T4R5 1651 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms