RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 XKR5Q6UX68 686 aa8.59□□□□□ -1.03
PFDN4-202ENST00000441080 ELP3Q9H9T3 547 aa8.59□□□□□ -1.03
PFDN4-202ENST00000441080 IGHA2P01877 340 aa8.58□□□□□ -1.04
PFDN4-202ENST00000441080 ZNF468Q5VIY5 522 aaPredicted RBP8.58□□□□□ -1.04
PFDN4-202ENST00000441080 CNTNAP3BQ96NU0 1288 aa8.58□□□□□ -1.04
PFDN4-202ENST00000441080 CNTNAP3Q9BZ76 1288 aa8.58□□□□□ -1.04
PFDN4-202ENST00000441080 ABI2Q9NYB9 513 aaPredicted RBP8.58□□□□□ -1.04
PFDN4-202ENST00000441080 TMEM63CQ9P1W3 806 aa8.58□□□□□ -1.04
PFDN4-202ENST00000441080 ZFATQ9P243 1243 aa8.58□□□□□ -1.04
PFDN4-202ENST00000441080 IGF1RP08069 1367 aa8.58□□□□□ -1.04
PFDN4-202ENST00000441080 TREHO43280 583 aa8.57□□□□□ -1.04
PFDN4-202ENST00000441080 ERCC3P19447 782 aa8.57□□□□□ -1.04
PFDN4-202ENST00000441080 PCBP4P57723 403 aaKnown RBP8.57□□□□□ -1.04
PFDN4-202ENST00000441080 KRT76Q01546 638 aa8.57□□□□□ -1.04
PFDN4-202ENST00000441080 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
PFDN4-202ENST00000441080 TTC39BQ5VTQ0 682 aaPredicted RBP8.57□□□□□ -1.04
PFDN4-202ENST00000441080 SYT9Q86SS6 491 aa8.57□□□□□ -1.04
PFDN4-202ENST00000441080 NIF3L1Q9GZT8 377 aa8.57□□□□□ -1.04
PFDN4-202ENST00000441080 AVENQ9NQS1 362 aaPredicted RBP8.57□□□□□ -1.04
PFDN4-202ENST00000441080 TNFRSF21O75509 655 aa8.56□□□□□ -1.04
PFDN4-202ENST00000441080 NEFLP07196 543 aa8.56□□□□□ -1.04
PFDN4-202ENST00000441080 ARAFP10398 606 aa8.56□□□□□ -1.04
PFDN4-202ENST00000441080 GMPRP36959 345 aa8.56□□□□□ -1.04
PFDN4-202ENST00000441080 SRSF11Q05519 484 aaKnown RBP8.56□□□□□ -1.04
PFDN4-202ENST00000441080 SNX29Q8TEQ0 813 aa8.56□□□□□ -1.04
PFDN4-202ENST00000441080 ALKBH8Q96BT7 664 aaKnown RBP8.56□□□□□ -1.04
PFDN4-202ENST00000441080 MMP20O60882 483 aa8.55□□□□□ -1.04
PFDN4-202ENST00000441080 PHACTR2O75167 634 aa8.55□□□□□ -1.04
PFDN4-202ENST00000441080 SIN3BO75182 1162 aa8.55□□□□□ -1.04
PFDN4-202ENST00000441080 MAP3K6O95382 1288 aa8.55□□□□□ -1.04
PFDN4-202ENST00000441080 ADH6P28332 368 aa8.55□□□□□ -1.04
PFDN4-202ENST00000441080 PLCB3Q01970 1234 aa8.55□□□□□ -1.04
PFDN4-202ENST00000441080 TREML4Q6UXN2 200 aa8.55□□□□□ -1.04
PFDN4-202ENST00000441080 FOXD3Q9UJU5 478 aaPredicted RBP8.55□□□□□ -1.04
PFDN4-202ENST00000441080 PSAPP07602 524 aa8.54□□□□□ -1.04
PFDN4-202ENST00000441080 DSC3Q14574 896 aa8.54□□□□□ -1.04
PFDN4-202ENST00000441080 DHX32Q7L7V1 743 aaKnown RBP8.54□□□□□ -1.04
PFDN4-202ENST00000441080 NPAS4Q8IUM7 802 aa8.54□□□□□ -1.04
PFDN4-202ENST00000441080 TLR7Q9NYK1 1049 aaKnown RBP8.54□□□□□ -1.04
PFDN4-202ENST00000441080 ADAMTS2O95450 1211 aa8.53□□□□□ -1.04
PFDN4-202ENST00000441080 FMR1Q06787 632 aaKnown RBP eCLIP8.53□□□□□ -1.04
PFDN4-202ENST00000441080 TBC1D8BQ0IIM8 1120 aa8.53□□□□□ -1.04
PFDN4-202ENST00000441080 ORC1Q13415 861 aa8.53□□□□□ -1.04
PFDN4-202ENST00000441080 OXCT2Q9BYC2 517 aaPredicted RBP8.53□□□□□ -1.04
PFDN4-202ENST00000441080 UBE2OQ9C0C9 1292 aaKnown RBP8.53□□□□□ -1.04
PFDN4-202ENST00000441080 IGFLR1Q9H665 355 aa8.53□□□□□ -1.04
PFDN4-202ENST00000441080 CNTN3Q9P232 1028 aa8.53□□□□□ -1.04
PFDN4-202ENST00000441080 KLF15Q9UIH9 416 aa8.53□□□□□ -1.04
PFDN4-202ENST00000441080 GGA1Q9UJY5 639 aa8.53□□□□□ -1.04
PFDN4-202ENST00000441080 NEURL1BA8MQ27 555 aa8.52□□□□□ -1.05
PFDN4-202ENST00000441080 PHF20L1A8MW92 1017 aa8.52□□□□□ -1.05
PFDN4-202ENST00000441080 P4HBP07237 508 aaKnown RBP8.52□□□□□ -1.05
PFDN4-202ENST00000441080 CES1P23141 567 aa8.52□□□□□ -1.05
PFDN4-202ENST00000441080 SOX18P35713 384 aa8.52□□□□□ -1.05
PFDN4-202ENST00000441080 MAPK8P45983 427 aa8.52□□□□□ -1.05
PFDN4-202ENST00000441080 GOLGA6L1Q8N7Z2 621 aa8.52□□□□□ -1.05
PFDN4-202ENST00000441080 C1orf127Q8N9H9 656 aa8.52□□□□□ -1.05
PFDN4-202ENST00000441080 OR13H1Q8NG92 308 aa8.52□□□□□ -1.05
PFDN4-202ENST00000441080 CHRDQ9H2X0 955 aa8.52□□□□□ -1.05
PFDN4-202ENST00000441080 EIF1AYO14602 144 aaKnown RBP8.51□□□□□ -1.05
PFDN4-202ENST00000441080 CPNE3O75131 537 aaKnown RBP8.51□□□□□ -1.05
PFDN4-202ENST00000441080 CYP2E1P05181 493 aaPredicted RBP8.51□□□□□ -1.05
PFDN4-202ENST00000441080 PLAURQ03405 335 aa8.51□□□□□ -1.05
PFDN4-202ENST00000441080 COL19A1Q14993 1142 aa8.51□□□□□ -1.05
PFDN4-202ENST00000441080 TNFRSF25Q93038 417 aa8.51□□□□□ -1.05
PFDN4-202ENST00000441080 PMEPA1Q969W9 287 aa8.51□□□□□ -1.05
PFDN4-202ENST00000441080 CSRNP1Q96S65 589 aa8.51□□□□□ -1.05
PFDN4-202ENST00000441080 DNAJB12Q9NXW2 375 aaKnown RBP8.51□□□□□ -1.05
PFDN4-202ENST00000441080 KANSL3Q9P2N6 904 aa8.51□□□□□ -1.05
PFDN4-202ENST00000441080 GDF2Q9UK05 429 aaPredicted RBP8.51□□□□□ -1.05
PFDN4-202ENST00000441080 PNMA6FA0A0J9YX94 578 aa8.5□□□□□ -1.05
PFDN4-202ENST00000441080 EREGO14944 169 aa8.5□□□□□ -1.05
PFDN4-202ENST00000441080 NRLP54845 237 aa8.5□□□□□ -1.05
PFDN4-202ENST00000441080 GPLD1P80108 840 aa8.5□□□□□ -1.05
PFDN4-202ENST00000441080 EAPPQ56P03 285 aaPredicted RBP8.5□□□□□ -1.05
PFDN4-202ENST00000441080 SLCO4C1Q6ZQN7 724 aa8.5□□□□□ -1.05
PFDN4-202ENST00000441080 FCHSD1Q86WN1 690 aa8.5□□□□□ -1.05
PFDN4-202ENST00000441080 RGS22Q8NE09 1264 aa8.5□□□□□ -1.05
PFDN4-202ENST00000441080 ACDQ96AP0 544 aa8.5□□□□□ -1.05
PFDN4-202ENST00000441080 DNAJC25Q9H1X3 360 aa8.5□□□□□ -1.05
PFDN4-202ENST00000441080 ZFYVE28Q9HCC9 887 aa8.5□□□□□ -1.05
PFDN4-202ENST00000441080 AMOTL2Q9Y2J4 779 aa8.5□□□□□ -1.05
PFDN4-202ENST00000441080 SLURP2P0DP57 97 aa8.49□□□□□ -1.05
PFDN4-202ENST00000441080 HOXD8P13378 290 aaPredicted RBP8.49□□□□□ -1.05
PFDN4-202ENST00000441080 ADH7P40394 386 aa8.49□□□□□ -1.05
PFDN4-202ENST00000441080 MLLT1Q03111 559 aaPredicted RBP8.49□□□□□ -1.05
PFDN4-202ENST00000441080 HYAL2Q12891 473 aa8.49□□□□□ -1.05
PFDN4-202ENST00000441080 ENOX2Q16206 610 aaKnown RBP8.49□□□□□ -1.05
PFDN4-202ENST00000441080 PCSK7Q16549 785 aa8.49□□□□□ -1.05
PFDN4-202ENST00000441080 LCE2AQ5TA79 106 aaPredicted RBP8.49□□□□□ -1.05
PFDN4-202ENST00000441080 TRPM4Q8TD43 1214 aa8.49□□□□□ -1.05
PFDN4-202ENST00000441080 NSUN5Q96P11 429 aaKnown RBP8.49□□□□□ -1.05
PFDN4-202ENST00000441080 ADARB2-AS1A8MUL3 147 aa8.48□□□□□ -1.05
PFDN4-202ENST00000441080 ATP2B2Q01814 1243 aa8.48□□□□□ -1.05
PFDN4-202ENST00000441080 USPL1Q5W0Q7 1092 aa8.48□□□□□ -1.05
PFDN4-202ENST00000441080 ELOA3CA0A087WX78 387 aaPredicted RBP8.47□□□□□ -1.05
PFDN4-202ENST00000441080 ELOA3DA6NLF2 546 aaPredicted RBP8.47□□□□□ -1.05
PFDN4-202ENST00000441080 ZBTB42B2RXF5 422 aa8.47□□□□□ -1.05
PFDN4-202ENST00000441080 LDHBP07195 334 aaKnown RBP8.47□□□□□ -1.05
PFDN4-202ENST00000441080 ELOA3BQ3SY89 546 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms