RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 COL18A1P39060 1754 aa14.08□□□□□ -0.16
LTBR-203ENST00000441074 FAM193AP78312 1265 aa14.08□□□□□ -0.16
LTBR-203ENST00000441074 PLA2G4DQ86XP0 818 aa14.08□□□□□ -0.16
LTBR-203ENST00000441074 SLIT2O94813 1529 aa14.08□□□□□ -0.16
LTBR-203ENST00000441074 BCL9LQ86UU0 1499 aa14.07□□□□□ -0.16
LTBR-203ENST00000441074 PNMA6EA0A0J9YXQ4 647 aa14.07□□□□□ -0.16
LTBR-203ENST00000441074 ZNF75DP51815 510 aa14.07□□□□□ -0.16
LTBR-203ENST00000441074 NAA30Q147X3 362 aaPredicted RBP14.07□□□□□ -0.16
LTBR-203ENST00000441074 DRC7Q8IY82 874 aa14.07□□□□□ -0.16
LTBR-203ENST00000441074 IFNL2Q8IZJ0 200 aa14.07□□□□□ -0.16
LTBR-203ENST00000441074 ZNF397Q8NF99 534 aaPredicted RBP14.07□□□□□ -0.16
LTBR-203ENST00000441074 NUP62CLQ9H1M0 184 aa14.07□□□□□ -0.16
LTBR-203ENST00000441074 FAM53CQ9NYF3 392 aa14.07□□□□□ -0.16
LTBR-203ENST00000441074 SGSM2O43147 1006 aa14.07□□□□□ -0.16
LTBR-203ENST00000441074 GIGYF1O75420 1035 aaPredicted RBP14.07□□□□□ -0.16
LTBR-203ENST00000441074 GJB2P29033 226 aa14.07□□□□□ -0.16
LTBR-203ENST00000441074 PDE4CQ08493 712 aa14.07□□□□□ -0.16
LTBR-203ENST00000441074 LUZP1Q86V48 1076 aa14.07□□□□□ -0.16
LTBR-203ENST00000441074 SLC52A2Q9HAB3 445 aa14.07□□□□□ -0.16
LTBR-203ENST00000441074 CCDC9Q9Y3X0 531 aaKnown RBP14.07□□□□□ -0.16
LTBR-203ENST00000441074 LMO7Q8WWI1 1683 aa14.06□□□□□ -0.16
LTBR-203ENST00000441074 TPD52L1Q16890 204 aaPredicted RBP14.06□□□□□ -0.16
LTBR-203ENST00000441074 ZNF790Q6PG37 636 aa14.06□□□□□ -0.16
LTBR-203ENST00000441074 LSG1Q9H089 658 aaKnown RBP14.06□□□□□ -0.16
LTBR-203ENST00000441074 CBX8Q9HC52 389 aa14.06□□□□□ -0.16
LTBR-203ENST00000441074 NRBP1Q9UHY1 535 aa14.06□□□□□ -0.16
LTBR-203ENST00000441074 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
LTBR-203ENST00000441074 PLCH1Q4KWH8 1693 aa14.06□□□□□ -0.16
LTBR-203ENST00000441074 UBTFL1P0CB47 393 aaPredicted RBP14.06□□□□□ -0.16
LTBR-203ENST00000441074 CEP135Q66GS9 1140 aa14.06□□□□□ -0.16
LTBR-203ENST00000441074 RASEFQ8IZ41 740 aa14.06□□□□□ -0.16
LTBR-203ENST00000441074 TDRD7Q8NHU6 1098 aaKnown RBP14.06□□□□□ -0.16
LTBR-203ENST00000441074 SSH3Q8TE77 659 aa14.06□□□□□ -0.16
LTBR-203ENST00000441074 ZNF496Q96IT1 587 aaPredicted RBP14.06□□□□□ -0.16
LTBR-203ENST00000441074 ZSCAN31Q96LW9 406 aaPredicted RBP14.06□□□□□ -0.16
LTBR-203ENST00000441074 LRRFIP2Q9Y608 721 aaKnown RBP14.06□□□□□ -0.16
LTBR-203ENST00000441074 ELP1O95163 1332 aa14.05□□□□□ -0.16
LTBR-203ENST00000441074 PDIA4P13667 645 aaKnown RBP14.05□□□□□ -0.16
LTBR-203ENST00000441074 TRIM5Q9C035 493 aa14.05□□□□□ -0.16
LTBR-203ENST00000441074 HYPKQ9NX55 129 aa14.05□□□□□ -0.16
LTBR-203ENST00000441074 RGS17Q9UGC6 210 aaPredicted RBP14.05□□□□□ -0.16
LTBR-203ENST00000441074 AIMP1Q12904 312 aaKnown RBP14.04□□□□□ -0.16
LTBR-203ENST00000441074 CREBRFQ8IUR6 639 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 ZCRB1Q8TBF4 217 aaKnown RBP14.04□□□□□ -0.16
LTBR-203ENST00000441074 LARP6Q9BRS8 491 aaKnown RBP14.04□□□□□ -0.16
LTBR-203ENST00000441074 CHMP4AQ9BY43 222 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 QTRT2Q9H974 415 aaKnown RBP14.04□□□□□ -0.16
LTBR-203ENST00000441074 SH2B1Q9NRF2 756 aaPredicted RBP14.04□□□□□ -0.16
LTBR-203ENST00000441074 PI4KAP2A4QPH2 592 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 MYL6BP14649 208 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 CDC25BP30305 580 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 KCNJ4P48050 445 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 KRT85P78386 507 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 KMT5BQ4FZB7 885 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 ANO6Q4KMQ2 910 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 TTC6Q86TZ1 520 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 CCDC83Q8IWF9 413 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 PI4KAP1Q8N8J0 262 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 TIGD1Q96MW7 591 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 CCDC171Q6TFL3 1326 aa14.04□□□□□ -0.16
LTBR-203ENST00000441074 LARGE1O95461 756 aa14.03□□□□□ -0.16
LTBR-203ENST00000441074 LIG1P18858 919 aa14.03□□□□□ -0.16
LTBR-203ENST00000441074 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
LTBR-203ENST00000441074 ZNF772Q68DY9 489 aaPredicted RBP14.03□□□□□ -0.16
LTBR-203ENST00000441074 RBM43Q6ZSC3 357 aaKnown RBP14.03□□□□□ -0.16
LTBR-203ENST00000441074 CACTINQ8WUQ7 758 aaKnown RBP14.03□□□□□ -0.16
LTBR-203ENST00000441074 TNMDQ9H2S6 317 aa14.03□□□□□ -0.16
LTBR-203ENST00000441074 USP16Q9Y5T5 823 aa14.03□□□□□ -0.16
LTBR-203ENST00000441074 IL2RBP14784 551 aa14.03□□□□□ -0.16
LTBR-203ENST00000441074 CABP4P57796 275 aa14.03□□□□□ -0.16
LTBR-203ENST00000441074 POLA2Q14181 598 aa14.03□□□□□ -0.16
LTBR-203ENST00000441074 CAMK4Q16566 473 aa14.03□□□□□ -0.16
LTBR-203ENST00000441074 SLFNL1Q499Z3 407 aa14.03□□□□□ -0.16
LTBR-203ENST00000441074 VPS53Q5VIR6 699 aa14.03□□□□□ -0.16
LTBR-203ENST00000441074 DCAF5Q96JK2 942 aa14.03□□□□□ -0.16
LTBR-203ENST00000441074 USP44Q9H0E7 712 aa14.03□□□□□ -0.16
LTBR-203ENST00000441074 NWD2Q9ULI1 1742 aa14.02□□□□□ -0.16
LTBR-203ENST00000441074 VPS37CA5D8V6 355 aaPredicted RBP14.02□□□□□ -0.16
LTBR-203ENST00000441074 NEMFO60524 1076 aa14.02□□□□□ -0.16
LTBR-203ENST00000441074 CASTP20810 708 aaKnown RBP14.02□□□□□ -0.16
LTBR-203ENST00000441074 CARD10Q9BWT7 1032 aa14.02□□□□□ -0.16
LTBR-203ENST00000441074 DDX19AQ9NUU7 478 aaKnown RBP14.02□□□□□ -0.16
LTBR-203ENST00000441074 CALCOCO1Q9P1Z2 691 aa14.02□□□□□ -0.16
LTBR-203ENST00000441074 CLIP2Q9UDT6 1046 aa14.02□□□□□ -0.16
LTBR-203ENST00000441074 TRPC5Q9UL62 973 aaPredicted RBP14.02□□□□□ -0.16
LTBR-203ENST00000441074 ABCC6O95255 1503 aa14.02□□□□□ -0.16
LTBR-203ENST00000441074 ZBTB22O15209 634 aa14.02□□□□□ -0.17
LTBR-203ENST00000441074 PTCD1O75127 700 aaKnown RBP14.02□□□□□ -0.17
LTBR-203ENST00000441074 CDK11BP21127 795 aaKnown RBP14.02□□□□□ -0.17
LTBR-203ENST00000441074 RBM6P78332 1123 aaKnown RBP14.02□□□□□ -0.17
LTBR-203ENST00000441074 SLC20A2Q08357 652 aa14.02□□□□□ -0.17
LTBR-203ENST00000441074 VPS72Q15906 364 aa14.02□□□□□ -0.17
LTBR-203ENST00000441074 CNTROBQ8N137 903 aa14.02□□□□□ -0.17
LTBR-203ENST00000441074 KIF1BPQ96EK5 621 aa14.02□□□□□ -0.17
LTBR-203ENST00000441074 ERO1AQ96HE7 468 aa14.02□□□□□ -0.17
LTBR-203ENST00000441074 PDRG1Q9NUG6 133 aa14.02□□□□□ -0.17
LTBR-203ENST00000441074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.02□□□□□ -0.17
LTBR-203ENST00000441074 NAP1L2Q9ULW6 460 aaPredicted RBP14.02□□□□□ -0.17
LTBR-203ENST00000441074 HSP90AB4PQ58FF6 505 aa14.01□□□□□ -0.17
LTBR-203ENST00000441074 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms