RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 KIF5BP33176 963 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 RBM5P52756 815 aaKnown RBP eCLIP7.43□□□□□ -1.22
CNOT1-202ENST00000441024 CCDC152Q4G0S7 254 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 CEP85Q6P2H3 762 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 ZNF444Q8N0Y2 327 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-202ENST00000441024 VSIG10Q8N0Z9 540 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 TMTC2Q8N394 836 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 ZNF397Q8NF99 534 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-202ENST00000441024 XAGE3Q8WTP9 111 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 MINDY4BA8MYZ0 360 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 KIF20AO95235 890 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 ZSCAN22P10073 491 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-202ENST00000441024 GSTO1P78417 241 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 STX1AQ16623 288 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 STK11IPQ8N1F8 1099 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 AOX1Q06278 1338 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 GSDMDP57764 484 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 SKAP1Q86WV1 359 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 TMX3Q96JJ7 454 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 KRT23Q9C075 422 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 CCDC66A2RUB6 948 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 EPB41L2O43491 1005 aaKnown RBP7.42□□□□□ -1.22
CNOT1-202ENST00000441024 EIF3JO75822 258 aaKnown RBP7.42□□□□□ -1.22
CNOT1-202ENST00000441024 BMP15O95972 392 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 SFPQP23246 707 aaKnown RBP eCLIP7.42□□□□□ -1.22
CNOT1-202ENST00000441024 HOXC9P31274 260 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 IL13P35225 146 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 IARSP41252 1262 aaKnown RBP7.42□□□□□ -1.22
CNOT1-202ENST00000441024 DCAF5Q96JK2 942 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 TANGO6Q9C0B7 1094 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 CNNM2Q9H8M5 875 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 USP16Q9Y5T5 823 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 PTPRMP28827 1452 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 RNF123Q5XPI4 1314 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 ZNF76P36508 570 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 MCMDC2Q4G0Z9 681 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 PPP4R3BQ5MIZ7 849 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 RPGRQ92834 1020 aaKnown RBP7.42□□□□□ -1.22
CNOT1-202ENST00000441024 BAG3O95817 575 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 PDE4BQ07343 736 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 TNIP1Q15025 636 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 TMEM266Q2M3C6 531 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 CFAP100Q494V2 611 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 TTLL5Q6EMB2 1281 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 ZSCAN29Q8IWY8 852 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-202ENST00000441024 EYA1Q99502 592 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 TSG101Q99816 390 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 ANKIB1Q9P2G1 1089 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 ALKQ9UM73 1620 aa7.42□□□□□ -1.22
CNOT1-202ENST00000441024 PIP4K2BP78356 416 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 CCDC181Q5TID7 509 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 MFSD6Q6ZSS7 791 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 COPS6Q7L5N1 327 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 SPINK5Q9NQ38 1064 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-202ENST00000441024 ATP5J2-PTCD1G3V325 749 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 CAMK4Q16566 473 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 TMEM67Q5HYA8 995 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 FSIP1Q8NA03 581 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 INTS4Q96HW7 963 aaKnown RBP7.41□□□□□ -1.22
CNOT1-202ENST00000441024 GBP3Q9H0R5 595 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 EHMT1Q9H9B1 1298 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 CPS1P31327 1500 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 RNMTO43148 476 aaKnown RBP7.41□□□□□ -1.22
CNOT1-202ENST00000441024 PPP1R12BO60237 982 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-202ENST00000441024 EIF5P55010 431 aaKnown RBP7.41□□□□□ -1.22
CNOT1-202ENST00000441024 FKBP15Q5T1M5 1219 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 DDX46Q7L014 1031 aaKnown RBP7.41□□□□□ -1.22
CNOT1-202ENST00000441024 KLHL34Q8N239 644 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 ZGPATQ8N5A5 531 aaKnown RBP7.41□□□□□ -1.22
CNOT1-202ENST00000441024 UQCRHLA0A096LP55 91 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 CCDC194A0A1B0GVG4 234 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 RANBP6O60518 1105 aaKnown RBP7.41□□□□□ -1.22
CNOT1-202ENST00000441024 UQCRHP07919 91 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 FILIP1Q7Z7B0 1213 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 LRRC27Q9C0I9 530 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 ORC3Q9UBD5 711 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-202ENST00000441024 QRICH2Q9H0J4 1663 aa7.41□□□□□ -1.22
CNOT1-202ENST00000441024 ARHGEF10O15013 1369 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 ZBTB7BO15156 539 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-202ENST00000441024 FBLN1P23142 703 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 METAP2P50579 478 aaKnown RBP eCLIP7.4□□□□□ -1.22
CNOT1-202ENST00000441024 CCDC148Q8NFR7 591 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 CRNKL1Q9BZJ0 848 aaKnown RBP7.4□□□□□ -1.22
CNOT1-202ENST00000441024 ZHX3Q9H4I2 956 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 PRM3Q9NNZ6 103 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 ZRANB1Q9UGI0 708 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 RBM8AQ9Y5S9 174 aaKnown RBP7.4□□□□□ -1.22
CNOT1-202ENST00000441024 MAP3K19Q56UN5 1328 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 YEATS2Q9ULM3 1422 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 IL2RBP14784 551 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 GPTP24298 496 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 NLRP5P59047 1200 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 ATP2B3Q16720 1220 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 TMEM132AQ24JP5 1023 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 LRSAM1Q6UWE0 723 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 CRACR2BQ8N4Y2 399 aaPredicted RBP7.4□□□□□ -1.22
CNOT1-202ENST00000441024 CNNM3Q8NE01 707 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 PHACTR3Q96KR7 559 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 KIAA0232Q92628 1395 aa7.4□□□□□ -1.22
CNOT1-202ENST00000441024 GOLGA6L9A6NEM1 432 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms