RNA–Protein interactions for RNA: ENST00000440984.3

ZNF140-208, Transcript of zinc finger protein 140, humanhuman

TSL 3

Gene ZNF140, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140-208ENST00000440984 ANKRD44Q8N8A2 993 aa23.29■■□□□ 1.32
ZNF140-208ENST00000440984 RPGRQ92834 1020 aaKnown RBP23.29■■□□□ 1.32
ZNF140-208ENST00000440984 FHDC1Q9C0D6 1143 aaPredicted RBP23.29■■□□□ 1.32
ZNF140-208ENST00000440984 TNRC6CQ9HCJ0 1690 aaKnown RBP23.28■■□□□ 1.32
ZNF140-208ENST00000440984 SRGNP10124 158 aa23.28■■□□□ 1.32
ZNF140-208ENST00000440984 CHRNA5P30532 468 aa23.28■■□□□ 1.32
ZNF140-208ENST00000440984 EXOC6Q8TAG9 804 aa23.28■■□□□ 1.32
ZNF140-208ENST00000440984 C1orf115Q9H7X2 142 aa23.28■■□□□ 1.32
ZNF140-208ENST00000440984 LRP5O75197 1615 aa23.27■■□□□ 1.32
ZNF140-208ENST00000440984 NEFLP07196 543 aa23.27■■□□□ 1.32
ZNF140-208ENST00000440984 NPR1P16066 1061 aa23.27■■□□□ 1.32
ZNF140-208ENST00000440984 DPEP1P16444 411 aa23.27■■□□□ 1.32
ZNF140-208ENST00000440984 HOXA10P31260 410 aaPredicted RBP23.27■■□□□ 1.32
ZNF140-208ENST00000440984 AAMPQ13685 434 aa23.27■■□□□ 1.32
ZNF140-208ENST00000440984 MASTLQ96GX5 879 aa23.27■■□□□ 1.32
ZNF140-208ENST00000440984 CCDC85AQ96PX6 553 aaPredicted RBP23.27■■□□□ 1.32
ZNF140-208ENST00000440984 CHMP3Q9Y3E7 222 aa23.27■■□□□ 1.32
ZNF140-208ENST00000440984 MYH3P11055 1940 aa23.27■■□□□ 1.32
ZNF140-208ENST00000440984 A0A0G2JLW4 131 aa23.26■■□□□ 1.31
ZNF140-208ENST00000440984 DDX46Q7L014 1031 aaKnown RBP23.26■■□□□ 1.31
ZNF140-208ENST00000440984 RBM17Q96I25 401 aaKnown RBP23.26■■□□□ 1.31
ZNF140-208ENST00000440984 GREM2Q9H772 168 aa23.26■■□□□ 1.31
ZNF140-208ENST00000440984 RTL9Q8NET4 1388 aa23.26■■□□□ 1.31
ZNF140-208ENST00000440984 STYK1Q6J9G0 422 aa23.25■■□□□ 1.31
ZNF140-208ENST00000440984 ZNF622Q969S3 477 aaKnown RBP eCLIP23.25■■□□□ 1.31
ZNF140-208ENST00000440984 SYT17Q9BSW7 474 aa23.25■■□□□ 1.31
ZNF140-208ENST00000440984 MTX1Q13505 466 aa23.24■■□□□ 1.31
ZNF140-208ENST00000440984 FAM161AQ3B820 660 aa23.24■■□□□ 1.31
ZNF140-208ENST00000440984 CRAMP1Q96RY5 1269 aa23.24■■□□□ 1.31
ZNF140-208ENST00000440984 KCNA3P22001 575 aa23.23■■□□□ 1.31
ZNF140-208ENST00000440984 ITGA6P23229 1130 aa23.23■■□□□ 1.31
ZNF140-208ENST00000440984 ALDH1B1P30837 517 aa23.23■■□□□ 1.31
ZNF140-208ENST00000440984 ATP8B2P98198 1209 aa23.23■■□□□ 1.31
ZNF140-208ENST00000440984 IFIT5Q13325 482 aaKnown RBP23.23■■□□□ 1.31
ZNF140-208ENST00000440984 CCDC57Q2TAC2 916 aa23.23■■□□□ 1.31
ZNF140-208ENST00000440984 ANKRD18BA2A2Z9 1011 aa23.22■■□□□ 1.31
ZNF140-208ENST00000440984 RPAP2Q8IXW5 612 aaPredicted RBP23.22■■□□□ 1.31
ZNF140-208ENST00000440984 NLGN2Q8NFZ4 835 aa23.22■■□□□ 1.31
ZNF140-208ENST00000440984 CNKSR1Q969H4 720 aa23.22■■□□□ 1.31
ZNF140-208ENST00000440984 SEC31BQ9NQW1 1179 aa23.22■■□□□ 1.31
ZNF140-208ENST00000440984 SRGAP3O43295 1099 aa23.21■■□□□ 1.31
ZNF140-208ENST00000440984 CEP85Q6P2H3 762 aa23.21■■□□□ 1.31
ZNF140-208ENST00000440984 CDC5LQ99459 802 aaKnown RBP23.21■■□□□ 1.31
ZNF140-208ENST00000440984 PIM2Q9P1W9 311 aa23.21■■□□□ 1.31
ZNF140-208ENST00000440984 COL11A2P13942 1736 aaPredicted RBP23.21■■□□□ 1.31
ZNF140-208ENST00000440984 GRAPQ13588 217 aa23.2■■□□□ 1.3
ZNF140-208ENST00000440984 GRAPLQ8TC17 118 aaPredicted RBP23.2■■□□□ 1.3
ZNF140-208ENST00000440984 KIAA1551Q9HCM1 1747 aa23.19■■□□□ 1.3
ZNF140-208ENST00000440984 BBOX1O75936 387 aa23.19■■□□□ 1.3
ZNF140-208ENST00000440984 RPS8P62241 208 aaKnown RBP23.19■■□□□ 1.3
ZNF140-208ENST00000440984 TTLL6Q8N841 843 aa23.19■■□□□ 1.3
ZNF140-208ENST00000440984 CELF1Q92879 486 aaKnown RBP23.19■■□□□ 1.3
ZNF140-208ENST00000440984 PNMA6EA0A0J9YXQ4 647 aa23.18■■□□□ 1.3
ZNF140-208ENST00000440984 TAF7LQ5H9L4 462 aa23.18■■□□□ 1.3
ZNF140-208ENST00000440984 ANKRD18AQ8IVF6 992 aa23.18■■□□□ 1.3
ZNF140-208ENST00000440984 IGHMBP2P38935 993 aaKnown RBP23.17■■□□□ 1.3
ZNF140-208ENST00000440984 RFX5P48382 616 aaPredicted RBP23.17■■□□□ 1.3
ZNF140-208ENST00000440984 POLA2Q14181 598 aa23.17■■□□□ 1.3
ZNF140-208ENST00000440984 SSH3Q8TE77 659 aa23.17■■□□□ 1.3
ZNF140-208ENST00000440984 PCDHB15Q9Y5E8 787 aa23.17■■□□□ 1.3
ZNF140-208ENST00000440984 DLEC1Q9Y238 1755 aa23.17■■□□□ 1.3
ZNF140-208ENST00000440984 HMMRO75330 724 aa23.16■■□□□ 1.3
ZNF140-208ENST00000440984 DALRD3Q5D0E6 543 aaKnown RBP23.16■■□□□ 1.3
ZNF140-208ENST00000440984 SIRT2Q8IXJ6 389 aa23.16■■□□□ 1.3
ZNF140-208ENST00000440984 ZNF594Q96JF6 807 aaPredicted RBP23.16■■□□□ 1.3
ZNF140-208ENST00000440984 PTPN12Q05209 780 aaKnown RBP23.15■■□□□ 1.3
ZNF140-208ENST00000440984 PRPF40BQ6NWY9 871 aaKnown RBP23.15■■□□□ 1.3
ZNF140-208ENST00000440984 TMC4Q7Z404 712 aa23.15■■□□□ 1.3
ZNF140-208ENST00000440984 MPHOSPH8Q99549 860 aa23.15■■□□□ 1.3
ZNF140-208ENST00000440984 TAF1P21675 1872 aa23.15■■□□□ 1.3
ZNF140-208ENST00000440984 PPEF1O14829 653 aaPredicted RBP23.14■■□□□ 1.29
ZNF140-208ENST00000440984 LDHAL6AQ6ZMR3 332 aa23.14■■□□□ 1.29
ZNF140-208ENST00000440984 KLHDC4Q8TBB5 520 aa23.14■■□□□ 1.29
ZNF140-208ENST00000440984 COPRSQ9NQ92 184 aa23.14■■□□□ 1.29
ZNF140-208ENST00000440984 BSDC1Q9NW68 430 aaPredicted RBP23.14■■□□□ 1.29
ZNF140-208ENST00000440984 SP8Q8IXZ3 490 aa23.12■■□□□ 1.29
ZNF140-208ENST00000440984 TMX4Q9H1E5 349 aaPredicted RBP23.12■■□□□ 1.29
ZNF140-208ENST00000440984 CNNM1Q9NRU3 951 aa23.12■■□□□ 1.29
ZNF140-208ENST00000440984 FBXO3Q9UK99 471 aa23.12■■□□□ 1.29
ZNF140-208ENST00000440984 WWC3Q9ULE0 1092 aa23.12■■□□□ 1.29
ZNF140-208ENST00000440984 PA2G4Q9UQ80 394 aaKnown RBP23.12■■□□□ 1.29
ZNF140-208ENST00000440984 BCS1LQ9Y276 419 aa23.12■■□□□ 1.29
ZNF140-208ENST00000440984 ATP6V0A2Q9Y487 856 aa23.12■■□□□ 1.29
ZNF140-208ENST00000440984 SLX4Q8IY92 1834 aa23.11■■□□□ 1.29
ZNF140-208ENST00000440984 BRCA1P38398 1863 aaKnown RBP23.11■■□□□ 1.29
ZNF140-208ENST00000440984 COL4A1P02462 1669 aa23.1■■□□□ 1.29
ZNF140-208ENST00000440984 EYA2O00167 538 aa23.1■■□□□ 1.29
ZNF140-208ENST00000440984 C7orf43Q8WVR3 580 aa23.1■■□□□ 1.29
ZNF140-208ENST00000440984 PUS3Q9BZE2 481 aaKnown RBP23.1■■□□□ 1.29
ZNF140-208ENST00000440984 SIL1Q9H173 461 aa23.1■■□□□ 1.29
ZNF140-208ENST00000440984 SURF6O75683 361 aaKnown RBP23.09■■□□□ 1.29
ZNF140-208ENST00000440984 ERICH6BQ5W0A0 696 aa23.09■■□□□ 1.29
ZNF140-208ENST00000440984 CC2D2BQ6DHV5 1058 aa23.09■■□□□ 1.29
ZNF140-208ENST00000440984 ZNF219Q9P2Y4 722 aaPredicted RBP23.09■■□□□ 1.29
ZNF140-208ENST00000440984 NOP58Q9Y2X3 529 aaKnown RBP23.09■■□□□ 1.29
ZNF140-208ENST00000440984 RIPOR2Q9Y4F9 1068 aa23.09■■□□□ 1.29
ZNF140-208ENST00000440984 C21orf2O43822 256 aa23.08■■□□□ 1.29
ZNF140-208ENST00000440984 CIAO1O76071 339 aa23.08■■□□□ 1.29
ZNF140-208ENST00000440984 G3BP1Q13283 466 aaKnown RBP eCLIP23.08■■□□□ 1.29
ZNF140-208ENST00000440984 LRRC24Q50LG9 513 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms