RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 NLRP3Q96P20 1036 aa18.68■□□□□ 0.58
PLOD3-205ENST00000440925 GREM2Q9H772 168 aa18.68■□□□□ 0.58
PLOD3-205ENST00000440925 SRGNP10124 158 aa18.67■□□□□ 0.58
PLOD3-205ENST00000440925 HOXA10P31260 410 aaPredicted RBP18.67■□□□□ 0.58
PLOD3-205ENST00000440925 ST5P78524 1137 aa18.67■□□□□ 0.58
PLOD3-205ENST00000440925 POLA2Q14181 598 aa18.67■□□□□ 0.58
PLOD3-205ENST00000440925 A0A0G2JLW4 131 aa18.66■□□□□ 0.58
PLOD3-205ENST00000440925 IGHDP01880 384 aa18.66■□□□□ 0.58
PLOD3-205ENST00000440925 KLHDC4Q8TBB5 520 aa18.66■□□□□ 0.58
PLOD3-205ENST00000440925 SSH3Q8TE77 659 aa18.66■□□□□ 0.58
PLOD3-205ENST00000440925 ZNF594Q96JF6 807 aaPredicted RBP18.66■□□□□ 0.58
PLOD3-205ENST00000440925 LAMB2P55268 1798 aa18.65■□□□□ 0.58
PLOD3-205ENST00000440925 DPEP1P16444 411 aa18.65■□□□□ 0.58
PLOD3-205ENST00000440925 FAM161AQ3B820 660 aa18.65■□□□□ 0.58
PLOD3-205ENST00000440925 PDE6BP35913 854 aa18.64■□□□□ 0.57
PLOD3-205ENST00000440925 PTPN12Q05209 780 aaKnown RBP18.64■□□□□ 0.57
PLOD3-205ENST00000440925 C2CD5Q86YS7 1000 aa18.64■□□□□ 0.57
PLOD3-205ENST00000440925 RPAP2Q8IXW5 612 aaPredicted RBP18.64■□□□□ 0.57
PLOD3-205ENST00000440925 NLGN2Q8NFZ4 835 aa18.64■□□□□ 0.57
PLOD3-205ENST00000440925 CELF1Q92879 486 aaKnown RBP18.64■□□□□ 0.57
PLOD3-205ENST00000440925 CD2APQ9Y5K6 639 aa18.64■□□□□ 0.57
PLOD3-205ENST00000440925 KIAA1551Q9HCM1 1747 aa18.63■□□□□ 0.57
PLOD3-205ENST00000440925 KIF13BQ9NQT8 1826 aa18.63■□□□□ 0.57
PLOD3-205ENST00000440925 TAF1P21675 1872 aa18.63■□□□□ 0.57
PLOD3-205ENST00000440925 ITGA6P23229 1130 aa18.63■□□□□ 0.57
PLOD3-205ENST00000440925 PUS3Q9BZE2 481 aaKnown RBP18.63■□□□□ 0.57
PLOD3-205ENST00000440925 PA2G4Q9UQ80 394 aaKnown RBP18.63■□□□□ 0.57
PLOD3-205ENST00000440925 RTL9Q8NET4 1388 aa18.63■□□□□ 0.57
PLOD3-205ENST00000440925 NPHP1O15259 732 aa18.62■□□□□ 0.57
PLOD3-205ENST00000440925 SRGAP3O43295 1099 aa18.62■□□□□ 0.57
PLOD3-205ENST00000440925 FHDC1Q9C0D6 1143 aaPredicted RBP18.62■□□□□ 0.57
PLOD3-205ENST00000440925 CHMP4BQ9H444 224 aaKnown RBP18.62■□□□□ 0.57
PLOD3-205ENST00000440925 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.62■□□□□ 0.57
PLOD3-205ENST00000440925 TGFB2P61812 414 aa18.61■□□□□ 0.57
PLOD3-205ENST00000440925 AAMPQ13685 434 aa18.61■□□□□ 0.57
PLOD3-205ENST00000440925 CCDC152Q4G0S7 254 aa18.61■□□□□ 0.57
PLOD3-205ENST00000440925 CRAMP1Q96RY5 1269 aa18.61■□□□□ 0.57
PLOD3-205ENST00000440925 WTIPA6NIX2 430 aaPredicted RBP18.6■□□□□ 0.57
PLOD3-205ENST00000440925 H0YIN7 160 aa18.6■□□□□ 0.57
PLOD3-205ENST00000440925 NPR1P16066 1061 aa18.6■□□□□ 0.57
PLOD3-205ENST00000440925 LRRC24Q50LG9 513 aa18.6■□□□□ 0.57
PLOD3-205ENST00000440925 ATG9AQ7Z3C6 839 aa18.6■□□□□ 0.57
PLOD3-205ENST00000440925 C7orf43Q8WVR3 580 aa18.6■□□□□ 0.57
PLOD3-205ENST00000440925 MASTLQ96GX5 879 aa18.6■□□□□ 0.57
PLOD3-205ENST00000440925 SYT17Q9BSW7 474 aa18.6■□□□□ 0.57
PLOD3-205ENST00000440925 COPRSQ9NQ92 184 aa18.6■□□□□ 0.57
PLOD3-205ENST00000440925 HDAC5Q9UQL6 1122 aa18.6■□□□□ 0.57
PLOD3-205ENST00000440925 COL11A2P13942 1736 aaPredicted RBP18.6■□□□□ 0.57
PLOD3-205ENST00000440925 HSP90B1P14625 803 aaKnown RBP18.59■□□□□ 0.57
PLOD3-205ENST00000440925 RPS8P62241 208 aaKnown RBP18.59■□□□□ 0.57
PLOD3-205ENST00000440925 STYK1Q6J9G0 422 aa18.59■□□□□ 0.57
PLOD3-205ENST00000440925 OLFM4Q6UX06 510 aa18.59■□□□□ 0.57
PLOD3-205ENST00000440925 NOP58Q9Y2X3 529 aaKnown RBP18.59■□□□□ 0.57
PLOD3-205ENST00000440925 CHMP3Q9Y3E7 222 aa18.59■□□□□ 0.57
PLOD3-205ENST00000440925 RIPOR2Q9Y4F9 1068 aa18.59■□□□□ 0.57
PLOD3-205ENST00000440925 IFIT5Q13325 482 aaKnown RBP18.58■□□□□ 0.56
PLOD3-205ENST00000440925 ZNF622Q969S3 477 aaKnown RBP eCLIP18.58■□□□□ 0.561e-6■■□□□ 14.2
PLOD3-205ENST00000440925 RBM17Q96I25 401 aaKnown RBP18.58■□□□□ 0.56
PLOD3-205ENST00000440925 PPP1R1BQ9UD71 204 aaPredicted RBP18.58■□□□□ 0.56
PLOD3-205ENST00000440925 ANKRD18BA2A2Z9 1011 aa18.57■□□□□ 0.56
PLOD3-205ENST00000440925 HDAC1Q13547 482 aaPredicted RBP18.57■□□□□ 0.56
PLOD3-205ENST00000440925 GRAPQ13588 217 aa18.57■□□□□ 0.56
PLOD3-205ENST00000440925 CCDC57Q2TAC2 916 aa18.57■□□□□ 0.56
PLOD3-205ENST00000440925 DDX46Q7L014 1031 aaKnown RBP18.57■□□□□ 0.56
PLOD3-205ENST00000440925 GRAPLQ8TC17 118 aaPredicted RBP18.57■□□□□ 0.56
PLOD3-205ENST00000440925 DCTPP1Q9H773 170 aa18.57■□□□□ 0.56
PLOD3-205ENST00000440925 MYH3P11055 1940 aa18.57■□□□□ 0.56
PLOD3-205ENST00000440925 SASH1O94885 1247 aa18.56■□□□□ 0.56
PLOD3-205ENST00000440925 RPGRQ92834 1020 aaKnown RBP18.56■□□□□ 0.56
PLOD3-205ENST00000440925 PDZRN3Q9UPQ7 1066 aa18.56■□□□□ 0.56
PLOD3-205ENST00000440925 BBOX1O75936 387 aa18.55■□□□□ 0.56
PLOD3-205ENST00000440925 ERICH6BQ5W0A0 696 aa18.55■□□□□ 0.56
PLOD3-205ENST00000440925 KLHL34Q8N239 644 aa18.55■□□□□ 0.56
PLOD3-205ENST00000440925 BSDC1Q9NW68 430 aaPredicted RBP18.55■□□□□ 0.56
PLOD3-205ENST00000440925 MINPP1Q9UNW1 487 aa18.55■□□□□ 0.56
PLOD3-205ENST00000440925 SLX4Q8IY92 1834 aa18.54■□□□□ 0.56
PLOD3-205ENST00000440925 EYA2O00167 538 aa18.54■□□□□ 0.56
PLOD3-205ENST00000440925 NEFLP07196 543 aa18.54■□□□□ 0.56
PLOD3-205ENST00000440925 SIL1Q9H173 461 aa18.54■□□□□ 0.56
PLOD3-205ENST00000440925 WWC3Q9ULE0 1092 aa18.54■□□□□ 0.56
PLOD3-205ENST00000440925 SNAP23O00161 211 aa18.53■□□□□ 0.56
PLOD3-205ENST00000440925 SURF6O75683 361 aaKnown RBP18.53■□□□□ 0.56
PLOD3-205ENST00000440925 ALDH1B1P30837 517 aa18.53■□□□□ 0.56
PLOD3-205ENST00000440925 LDHAL6AQ6ZMR3 332 aa18.53■□□□□ 0.56
PLOD3-205ENST00000440925 ANKRD18AQ8IVF6 992 aa18.53■□□□□ 0.56
PLOD3-205ENST00000440925 SP8Q8IXZ3 490 aa18.53■□□□□ 0.56
PLOD3-205ENST00000440925 EXOC6BQ9Y2D4 811 aa18.53■□□□□ 0.56
PLOD3-205ENST00000440925 SRCAPQ6ZRS2 3230 aa18.52■□□□□ 0.56
PLOD3-205ENST00000440925 PRPF40BQ6NWY9 871 aaKnown RBP18.52■□□□□ 0.56
PLOD3-205ENST00000440925 TTLL6Q8N841 843 aa18.52■□□□□ 0.56
PLOD3-205ENST00000440925 VGLL2Q8N8G2 317 aa18.52■□□□□ 0.56
PLOD3-205ENST00000440925 HELBQ8NG08 1087 aaPredicted RBP18.52■□□□□ 0.56
PLOD3-205ENST00000440925 CNKSR1Q969H4 720 aa18.52■□□□□ 0.56
PLOD3-205ENST00000440925 PIM2Q9P1W9 311 aa18.52■□□□□ 0.56
PLOD3-205ENST00000440925 KDM2BQ8NHM5 1336 aa18.51■□□□□ 0.55
PLOD3-205ENST00000440925 SNED1Q8TER0 1413 aa18.51■□□□□ 0.55
PLOD3-205ENST00000440925 CIAO1O76071 339 aa18.51■□□□□ 0.55
PLOD3-205ENST00000440925 B4GALNT3Q6L9W6 998 aa18.51■□□□□ 0.55
PLOD3-205ENST00000440925 SMC5Q8IY18 1101 aa18.51■□□□□ 0.55
PLOD3-205ENST00000440925 CDC5LQ99459 802 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms