RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 GTF2E1P29083 439 aaPredicted RBP12.8□□□□□ -0.36
AP004290.1-201ENST00000440915 CTSWP56202 376 aa12.8□□□□□ -0.36
AP004290.1-201ENST00000440915 DDR1Q08345 913 aa12.8□□□□□ -0.36
AP004290.1-201ENST00000440915 SLC10A5Q5PT55 438 aa12.8□□□□□ -0.36
AP004290.1-201ENST00000440915 SMC5Q8IY18 1101 aa12.8□□□□□ -0.36
AP004290.1-201ENST00000440915 DDX60Q8IY21 1712 aaKnown RBP12.8□□□□□ -0.36
AP004290.1-201ENST00000440915 LAMB2P55268 1798 aa12.8□□□□□ -0.36
AP004290.1-201ENST00000440915 TTLL11Q8NHH1 800 aa12.79□□□□□ -0.36
AP004290.1-201ENST00000440915 PDGFDQ9GZP0 370 aaPredicted RBP12.79□□□□□ -0.36
AP004290.1-201ENST00000440915 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
AP004290.1-201ENST00000440915 ABCC12Q96J65 1359 aa12.79□□□□□ -0.36
AP004290.1-201ENST00000440915 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
AP004290.1-201ENST00000440915 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
AP004290.1-201ENST00000440915 PRR5LQ6MZQ0 368 aa12.79□□□□□ -0.36
AP004290.1-201ENST00000440915 CCDC24Q8N4L8 307 aa12.79□□□□□ -0.36
AP004290.1-201ENST00000440915 CNBD1Q8NA66 436 aa12.79□□□□□ -0.36
AP004290.1-201ENST00000440915 NPHP1O15259 732 aa12.78□□□□□ -0.36
AP004290.1-201ENST00000440915 SURF6O75683 361 aaKnown RBP12.78□□□□□ -0.36
AP004290.1-201ENST00000440915 MMP10P09238 476 aa12.78□□□□□ -0.36
AP004290.1-201ENST00000440915 MYH3P11055 1940 aa12.78□□□□□ -0.36
AP004290.1-201ENST00000440915 PTPN12Q05209 780 aaKnown RBP12.78□□□□□ -0.36
AP004290.1-201ENST00000440915 SLC16A10Q8TF71 515 aa12.78□□□□□ -0.36
AP004290.1-201ENST00000440915 CCDC85AQ96PX6 553 aaPredicted RBP12.78□□□□□ -0.36
AP004290.1-201ENST00000440915 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
AP004290.1-201ENST00000440915 PA2G4Q9UQ80 394 aaKnown RBP12.78□□□□□ -0.36
AP004290.1-201ENST00000440915 EXOC6BQ9Y2D4 811 aa12.78□□□□□ -0.36
AP004290.1-201ENST00000440915 PARP3Q9Y6F1 533 aa12.78□□□□□ -0.36
AP004290.1-201ENST00000440915 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
AP004290.1-201ENST00000440915 CCDC57Q2TAC2 916 aa12.77□□□□□ -0.37
AP004290.1-201ENST00000440915 FAM161AQ3B820 660 aa12.77□□□□□ -0.37
AP004290.1-201ENST00000440915 CCDC152Q4G0S7 254 aa12.77□□□□□ -0.37
AP004290.1-201ENST00000440915 C3orf67Q6ZVT6 689 aa12.77□□□□□ -0.37
AP004290.1-201ENST00000440915 KLHDC4Q8TBB5 520 aa12.77□□□□□ -0.37
AP004290.1-201ENST00000440915 GREM2Q9H772 168 aa12.77□□□□□ -0.37
AP004290.1-201ENST00000440915 COPRSQ9NQ92 184 aa12.77□□□□□ -0.37
AP004290.1-201ENST00000440915 NOP58Q9Y2X3 529 aaKnown RBP12.77□□□□□ -0.37
AP004290.1-201ENST00000440915 NRXN2Q9P2S2 1712 aa12.76□□□□□ -0.37
AP004290.1-201ENST00000440915 RIC1Q4ADV7 1423 aa12.76□□□□□ -0.37
AP004290.1-201ENST00000440915 ITGA6P23229 1130 aa12.76□□□□□ -0.37
AP004290.1-201ENST00000440915 ST5P78524 1137 aa12.76□□□□□ -0.37
AP004290.1-201ENST00000440915 NUCB1Q02818 461 aa12.76□□□□□ -0.37
AP004290.1-201ENST00000440915 IFIT5Q13325 482 aaKnown RBP12.76□□□□□ -0.37
AP004290.1-201ENST00000440915 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
AP004290.1-201ENST00000440915 HSP90AB4PQ58FF6 505 aa12.76□□□□□ -0.37
AP004290.1-201ENST00000440915 ANKRD45Q5TZF3 282 aa12.76□□□□□ -0.37
AP004290.1-201ENST00000440915 NLRP3Q96P20 1036 aa12.76□□□□□ -0.37
AP004290.1-201ENST00000440915 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
AP004290.1-201ENST00000440915 RTL9Q8NET4 1388 aa12.75□□□□□ -0.37
AP004290.1-201ENST00000440915 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
AP004290.1-201ENST00000440915 APBB1O00213 710 aa12.75□□□□□ -0.37
AP004290.1-201ENST00000440915 RAB11FIP3O75154 756 aa12.75□□□□□ -0.37
AP004290.1-201ENST00000440915 ZNF594Q96JF6 807 aaPredicted RBP12.75□□□□□ -0.37
AP004290.1-201ENST00000440915 SIL1Q9H173 461 aa12.75□□□□□ -0.37
AP004290.1-201ENST00000440915 CASZ1Q86V15 1759 aa12.74□□□□□ -0.37
AP004290.1-201ENST00000440915 TNRC6CQ9HCJ0 1690 aaKnown RBP12.74□□□□□ -0.37
AP004290.1-201ENST00000440915 G3BP1Q13283 466 aaKnown RBP eCLIP12.74□□□□□ -0.37
AP004290.1-201ENST00000440915 OS9Q13438 667 aaPredicted RBP12.74□□□□□ -0.37
AP004290.1-201ENST00000440915 TAF7LQ5H9L4 462 aa12.74□□□□□ -0.37
AP004290.1-201ENST00000440915 CHD1LQ86WJ1 897 aa12.74□□□□□ -0.37
AP004290.1-201ENST00000440915 SKAP1Q86WV1 359 aa12.74□□□□□ -0.37
AP004290.1-201ENST00000440915 SEC31BQ9NQW1 1179 aa12.74□□□□□ -0.37
AP004290.1-201ENST00000440915 SMARCA5O60264 1052 aaPredicted RBP12.73□□□□□ -0.37
AP004290.1-201ENST00000440915 ERC1Q8IUD2 1116 aa12.73□□□□□ -0.37
AP004290.1-201ENST00000440915 RHPN1Q8TCX5 695 aa12.73□□□□□ -0.37
AP004290.1-201ENST00000440915 LRRCC1Q9C099 1032 aa12.73□□□□□ -0.37
AP004290.1-201ENST00000440915 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
AP004290.1-201ENST00000440915 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
AP004290.1-201ENST00000440915 PSDA5PKW4 1024 aaPredicted RBP12.72□□□□□ -0.37
AP004290.1-201ENST00000440915 EYA2O00167 538 aa12.72□□□□□ -0.37
AP004290.1-201ENST00000440915 CIAO1O76071 339 aa12.72□□□□□ -0.37
AP004290.1-201ENST00000440915 SASH1O94885 1247 aa12.72□□□□□ -0.37
AP004290.1-201ENST00000440915 LRRC24Q50LG9 513 aa12.72□□□□□ -0.37
AP004290.1-201ENST00000440915 KIF1BPQ96EK5 621 aa12.72□□□□□ -0.37
AP004290.1-201ENST00000440915 BRIP1Q9BX63 1249 aa12.72□□□□□ -0.37
AP004290.1-201ENST00000440915 PUS3Q9BZE2 481 aaKnown RBP12.72□□□□□ -0.37
AP004290.1-201ENST00000440915 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
AP004290.1-201ENST00000440915 PDE4AP27815 886 aa12.71□□□□□ -0.37
AP004290.1-201ENST00000440915 LDHAL6AQ6ZMR3 332 aa12.71□□□□□ -0.37
AP004290.1-201ENST00000440915 ATG9AQ7Z3C6 839 aa12.71□□□□□ -0.37
AP004290.1-201ENST00000440915 CDC5LQ99459 802 aaKnown RBP12.71□□□□□ -0.37
AP004290.1-201ENST00000440915 MTFR1LQ9H019 292 aa12.71□□□□□ -0.37
AP004290.1-201ENST00000440915 FBXO3Q9UK99 471 aa12.71□□□□□ -0.37
AP004290.1-201ENST00000440915 ANKRD31Q8N7Z5 1873 aa12.71□□□□□ -0.37
AP004290.1-201ENST00000440915 LRP5O75197 1615 aa12.71□□□□□ -0.38
AP004290.1-201ENST00000440915 KLRG2A4D1S0 409 aaPredicted RBP12.71□□□□□ -0.38
AP004290.1-201ENST00000440915 IL15P40933 162 aaPredicted RBP12.71□□□□□ -0.38
AP004290.1-201ENST00000440915 CRY2Q49AN0 593 aa12.71□□□□□ -0.38
AP004290.1-201ENST00000440915 DDX46Q7L014 1031 aaKnown RBP12.71□□□□□ -0.38
AP004290.1-201ENST00000440915 BCL11AQ9H165 835 aa12.71□□□□□ -0.38
AP004290.1-201ENST00000440915 IL1RAPL2Q9NP60 686 aa12.71□□□□□ -0.38
AP004290.1-201ENST00000440915 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.71□□□□□ -0.38
AP004290.1-201ENST00000440915 COL4A1P02462 1669 aa12.7□□□□□ -0.38
AP004290.1-201ENST00000440915 PDE6BP35913 854 aa12.7□□□□□ -0.38
AP004290.1-201ENST00000440915 IGHMBP2P38935 993 aaKnown RBP12.7□□□□□ -0.38
AP004290.1-201ENST00000440915 TFCP2Q12800 502 aa12.7□□□□□ -0.38
AP004290.1-201ENST00000440915 ANKRD18AQ8IVF6 992 aa12.7□□□□□ -0.38
AP004290.1-201ENST00000440915 C16orf71Q8IYS4 520 aaPredicted RBP12.7□□□□□ -0.38
AP004290.1-201ENST00000440915 RPGRQ92834 1020 aaKnown RBP12.7□□□□□ -0.38
AP004290.1-201ENST00000440915 CELF1Q92879 486 aaKnown RBP12.7□□□□□ -0.38
AP004290.1-201ENST00000440915 CNNM1Q9NRU3 951 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms