RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 CCDC57Q2TAC2 916 aa23.46■■□□□ 1.35
SNX17-203ENST00000440760 EAF2Q96CJ1 260 aaPredicted RBP23.46■■□□□ 1.35
SNX17-203ENST00000440760 TLR7Q9NYK1 1049 aaKnown RBP23.46■■□□□ 1.35
SNX17-203ENST00000440760 USP42Q9H9J4 1324 aaKnown RBP23.46■■□□□ 1.35
SNX17-203ENST00000440760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.45■■□□□ 1.35
SNX17-203ENST00000440760 LRRC24Q50LG9 513 aa23.45■■□□□ 1.35
SNX17-203ENST00000440760 TRAPPC3LQ5T215 181 aa23.45■■□□□ 1.35
SNX17-203ENST00000440760 PUS3Q9BZE2 481 aaKnown RBP23.45■■□□□ 1.35
SNX17-203ENST00000440760 RFC4P35249 363 aa23.45■■□□□ 1.34
SNX17-203ENST00000440760 ATG9AQ7Z3C6 839 aa23.45■■□□□ 1.34
SNX17-203ENST00000440760 CCDC8Q9H0W5 538 aaPredicted RBP23.45■■□□□ 1.34
SNX17-203ENST00000440760 IFIT2P09913 472 aaKnown RBP23.43■■□□□ 1.34
SNX17-203ENST00000440760 IFIT5Q13325 482 aaKnown RBP23.43■■□□□ 1.34
SNX17-203ENST00000440760 TBC1D9Q6ZT07 1266 aa23.43■■□□□ 1.34
SNX17-203ENST00000440760 PI4K2BQ8TCG2 481 aa23.43■■□□□ 1.34
SNX17-203ENST00000440760 ITGA6P23229 1130 aa23.43■■□□□ 1.34
SNX17-203ENST00000440760 AK9Q5TCS8 1911 aa23.42■■□□□ 1.34
SNX17-203ENST00000440760 EYA2O00167 538 aa23.42■■□□□ 1.34
SNX17-203ENST00000440760 SPEF2Q9C093 1822 aa23.42■■□□□ 1.34
SNX17-203ENST00000440760 AOX1Q06278 1338 aa23.42■■□□□ 1.34
SNX17-203ENST00000440760 PLSCR1O15162 318 aa23.41■■□□□ 1.34
SNX17-203ENST00000440760 CDC45O75419 566 aa23.41■■□□□ 1.34
SNX17-203ENST00000440760 MFAP1P55081 439 aaKnown RBP23.41■■□□□ 1.34
SNX17-203ENST00000440760 ERFEQ4G0M1 354 aa23.41■■□□□ 1.34
SNX17-203ENST00000440760 TAF7LQ5H9L4 462 aa23.41■■□□□ 1.34
SNX17-203ENST00000440760 ABCC12Q96J65 1359 aa23.41■■□□□ 1.34
SNX17-203ENST00000440760 MAP4K4O95819 1239 aaPredicted RBP23.41■■□□□ 1.34
SNX17-203ENST00000440760 TNNI3KQ59H18 835 aa23.41■■□□□ 1.34
SNX17-203ENST00000440760 FPGT-TNNI3KV9GXZ4 949 aa23.41■■□□□ 1.34
SNX17-203ENST00000440760 LRP5O75197 1615 aa23.41■■□□□ 1.34
SNX17-203ENST00000440760 RGL2O15211 777 aa23.4■■□□□ 1.34
SNX17-203ENST00000440760 ZNF827Q17R98 1081 aa23.4■■□□□ 1.34
SNX17-203ENST00000440760 COL4A1P02462 1669 aa23.4■■□□□ 1.34
SNX17-203ENST00000440760 SETDB2Q96T68 719 aa23.4■■□□□ 1.34
SNX17-203ENST00000440760 RGPD3A6NKT7 1758 aaPredicted RBP23.39■■□□□ 1.33
SNX17-203ENST00000440760 RGPD4Q7Z3J3 1758 aa23.39■■□□□ 1.33
SNX17-203ENST00000440760 ANKRD18BA2A2Z9 1011 aa23.39■■□□□ 1.33
SNX17-203ENST00000440760 TRIM6-TRIM34B2RNG4 842 aa23.39■■□□□ 1.33
SNX17-203ENST00000440760 ADRA2BP18089 450 aa23.39■■□□□ 1.33
SNX17-203ENST00000440760 IL15P40933 162 aaPredicted RBP23.39■■□□□ 1.33
SNX17-203ENST00000440760 RIC1Q4ADV7 1423 aa23.39■■□□□ 1.33
SNX17-203ENST00000440760 CIAO1O76071 339 aa23.38■■□□□ 1.33
SNX17-203ENST00000440760 C3orf67Q6ZVT6 689 aa23.38■■□□□ 1.33
SNX17-203ENST00000440760 CCDC24Q8N4L8 307 aa23.38■■□□□ 1.33
SNX17-203ENST00000440760 TTC41PQ6P2S7 1318 aa23.38■■□□□ 1.33
SNX17-203ENST00000440760 ZNF609O15014 1411 aa23.38■■□□□ 1.33
SNX17-203ENST00000440760 SSFA2P28290 1259 aa23.38■■□□□ 1.33
SNX17-203ENST00000440760 RILPL2Q969X0 211 aa23.38■■□□□ 1.33
SNX17-203ENST00000440760 ECHDC1Q9NTX5 307 aa23.38■■□□□ 1.33
SNX17-203ENST00000440760 DBNLQ9UJU6 430 aaKnown RBP23.38■■□□□ 1.33
SNX17-203ENST00000440760 SEC31BQ9NQW1 1179 aa23.37■■□□□ 1.33
SNX17-203ENST00000440760 NBPF5PQ86XG9 351 aaPredicted RBP23.36■■□□□ 1.33
SNX17-203ENST00000440760 GPATCH3Q96I76 525 aa23.36■■□□□ 1.33
SNX17-203ENST00000440760 TAF1P21675 1872 aa23.36■■□□□ 1.33
SNX17-203ENST00000440760 GTF2E1P29083 439 aaPredicted RBP23.36■■□□□ 1.33
SNX17-203ENST00000440760 ANP32AP39687 249 aaKnown RBP23.36■■□□□ 1.33
SNX17-203ENST00000440760 DBNDD2Q9BQY9 259 aa23.36■■□□□ 1.33
SNX17-203ENST00000440760 TNRC6CQ9HCJ0 1690 aaKnown RBP23.36■■□□□ 1.33
SNX17-203ENST00000440760 GYS1P13807 737 aa23.35■■□□□ 1.33
SNX17-203ENST00000440760 NFIXQ14938 502 aa23.35■■□□□ 1.33
SNX17-203ENST00000440760 GLRX3O76003 335 aaKnown RBP23.34■■□□□ 1.33
SNX17-203ENST00000440760 LDHAL6AQ6ZMR3 332 aa23.34■■□□□ 1.33
SNX17-203ENST00000440760 CCDC152Q4G0S7 254 aa23.34■■□□□ 1.33
SNX17-203ENST00000440760 AKT1S1Q96B36 256 aa23.34■■□□□ 1.33
SNX17-203ENST00000440760 TFCP2L1Q9NZI6 479 aa23.34■■□□□ 1.33
SNX17-203ENST00000440760 CARMIL3Q8ND23 1372 aa23.33■■□□□ 1.33
SNX17-203ENST00000440760 ERC2O15083 957 aa23.33■■□□□ 1.33
SNX17-203ENST00000440760 NYXQ9GZU5 481 aa23.33■■□□□ 1.33
SNX17-203ENST00000440760 UPF2Q9HAU5 1272 aaKnown RBP23.33■■□□□ 1.33
SNX17-203ENST00000440760 CNNM1Q9NRU3 951 aa23.33■■□□□ 1.33
SNX17-203ENST00000440760 TIMM10P62072 90 aa23.32■■□□□ 1.32
SNX17-203ENST00000440760 NEUROD6Q96NK8 337 aa23.32■■□□□ 1.32
SNX17-203ENST00000440760 CEP126Q9P2H0 1117 aa23.32■■□□□ 1.32
SNX17-203ENST00000440760 RIPOR2Q9Y4F9 1068 aa23.32■■□□□ 1.32
SNX17-203ENST00000440760 FBXO3Q9UK99 471 aa23.32■■□□□ 1.32
SNX17-203ENST00000440760 HSP90B1P14625 803 aaKnown RBP23.31■■□□□ 1.32
SNX17-203ENST00000440760 METTL24Q5JXM2 366 aa23.31■■□□□ 1.32
SNX17-203ENST00000440760 A0A1B0GUL7 405 aa23.31■■□□□ 1.32
SNX17-203ENST00000440760 EN1Q05925 392 aaPredicted RBP23.31■■□□□ 1.32
SNX17-203ENST00000440760 TBC1D32Q96NH3 1257 aa23.31■■□□□ 1.32
SNX17-203ENST00000440760 BOLA2Q9H3K6 86 aa23.31■■□□□ 1.32
SNX17-203ENST00000440760 RTL9Q8NET4 1388 aa23.3■■□□□ 1.32
SNX17-203ENST00000440760 EZH2Q15910 746 aaKnown RBP23.3■■□□□ 1.32
SNX17-203ENST00000440760 GPR108Q9NPR9 543 aa23.3■■□□□ 1.32
SNX17-203ENST00000440760 NPHP1O15259 732 aa23.29■■□□□ 1.32
SNX17-203ENST00000440760 TPTE2Q6XPS3 522 aa23.29■■□□□ 1.32
SNX17-203ENST00000440760 CNTROBQ8N137 903 aa23.29■■□□□ 1.32
SNX17-203ENST00000440760 NDUFB9Q9Y6M9 179 aa23.29■■□□□ 1.32
SNX17-203ENST00000440760 MSH5O43196 834 aa23.28■■□□□ 1.32
SNX17-203ENST00000440760 ADORA1P30542 326 aa23.28■■□□□ 1.32
SNX17-203ENST00000440760 SLC10A5Q5PT55 438 aa23.28■■□□□ 1.32
SNX17-203ENST00000440760 CASC1Q6TDU7 716 aa23.28■■□□□ 1.32
SNX17-203ENST00000440760 COL23A1Q86Y22 540 aaPredicted RBP23.28■■□□□ 1.32
SNX17-203ENST00000440760 CHMLP26374 656 aa23.27■■□□□ 1.32
SNX17-203ENST00000440760 VGLL2Q8N8G2 317 aa23.27■■□□□ 1.32
SNX17-203ENST00000440760 HELBQ8NG08 1087 aaPredicted RBP23.27■■□□□ 1.32
SNX17-203ENST00000440760 C22orf23Q9BZE7 217 aa23.27■■□□□ 1.32
SNX17-203ENST00000440760 ANO8Q9HCE9 1232 aaPredicted RBP23.27■■□□□ 1.32
SNX17-203ENST00000440760 A0A1B0GUL6 1792 aa23.27■■□□□ 1.32
SNX17-203ENST00000440760 SF3B3Q15393 1217 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms