RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 A6NJY4 79 aa9.06□□□□□ -0.96
CHD6-204ENST00000440647 ARHGEF15O94989 841 aa9.06□□□□□ -0.96
CHD6-204ENST00000440647 F11P03951 625 aa9.06□□□□□ -0.96
CHD6-204ENST00000440647 MTFR1Q15390 333 aa9.06□□□□□ -0.96
CHD6-204ENST00000440647 DBN1Q16643 649 aa9.06□□□□□ -0.96
CHD6-204ENST00000440647 TXNDC2Q86VQ3 553 aa9.06□□□□□ -0.96
CHD6-204ENST00000440647 KCTD17Q8N5Z5 321 aa9.06□□□□□ -0.96
CHD6-204ENST00000440647 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.06□□□□□ -0.96
CHD6-204ENST00000440647 TRERF1Q96PN7 1200 aa9.06□□□□□ -0.96
CHD6-204ENST00000440647 MAFBQ9Y5Q3 323 aaPredicted RBP9.06□□□□□ -0.96
CHD6-204ENST00000440647 A0A1B0GTH6 734 aa9.05□□□□□ -0.96
CHD6-204ENST00000440647 CDK2AP1O14519 115 aa9.05□□□□□ -0.96
CHD6-204ENST00000440647 KANK3Q6NY19 840 aa9.05□□□□□ -0.96
CHD6-204ENST00000440647 ALKQ9UM73 1620 aa9.05□□□□□ -0.96
CHD6-204ENST00000440647 ADGRB3O60242 1522 aa9.05□□□□□ -0.96
CHD6-204ENST00000440647 TMEM2Q9UHN6 1383 aa9.04□□□□□ -0.96
CHD6-204ENST00000440647 XIRP1Q702N8 1843 aaKnown RBP9.04□□□□□ -0.96
CHD6-204ENST00000440647 GSK3AP49840 483 aa9.04□□□□□ -0.96
CHD6-204ENST00000440647 CLDN10P78369 228 aa9.04□□□□□ -0.96
CHD6-204ENST00000440647 FAM50AQ14320 339 aaKnown RBP9.04□□□□□ -0.96
CHD6-204ENST00000440647 CCDC102BQ68D86 513 aa9.04□□□□□ -0.96
CHD6-204ENST00000440647 LARGE2Q8N3Y3 721 aa9.04□□□□□ -0.96
CHD6-204ENST00000440647 OGFOD1Q8N543 542 aa9.04□□□□□ -0.96
CHD6-204ENST00000440647 WHAMMQ8TF30 809 aa9.04□□□□□ -0.96
CHD6-204ENST00000440647 ZNF837Q96EG3 531 aaPredicted RBP9.04□□□□□ -0.96
CHD6-204ENST00000440647 MBIPQ9NS73 344 aa9.04□□□□□ -0.96
CHD6-204ENST00000440647 DNAAF2Q9NVR5 837 aaKnown RBP9.04□□□□□ -0.96
CHD6-204ENST00000440647 ZNF358Q9NW07 568 aa9.04□□□□□ -0.96
CHD6-204ENST00000440647 PODXL2Q9NZ53 605 aa9.04□□□□□ -0.96
CHD6-204ENST00000440647 NSFL1CQ9UNZ2 370 aaKnown RBP9.04□□□□□ -0.96
CHD6-204ENST00000440647 ADGRL2O95490 1459 aa9.03□□□□□ -0.96
CHD6-204ENST00000440647 LTKP29376 864 aa9.03□□□□□ -0.96
CHD6-204ENST00000440647 TPCN2Q8NHX9 752 aa9.03□□□□□ -0.96
CHD6-204ENST00000440647 NIFKQ9BYG3 293 aaKnown RBP9.03□□□□□ -0.96
CHD6-204ENST00000440647 IQSEC3Q9UPP2 1182 aaPredicted RBP9.03□□□□□ -0.96
CHD6-204ENST00000440647 KIAA1024Q9UPX6 916 aa9.03□□□□□ -0.96
CHD6-204ENST00000440647 GCC2Q8IWJ2 1684 aa9.03□□□□□ -0.96
CHD6-204ENST00000440647 TET3O43151 1660 aa9.02□□□□□ -0.97
CHD6-204ENST00000440647 LYPD4Q6UWN0 246 aa9.02□□□□□ -0.97
CHD6-204ENST00000440647 RPRD2Q5VT52 1461 aaKnown RBP9.02□□□□□ -0.97
CHD6-204ENST00000440647 MYO5BQ9ULV0 1848 aa9.01□□□□□ -0.97
CHD6-204ENST00000440647 CELA2BP08218 269 aaPredicted RBP9.01□□□□□ -0.97
CHD6-204ENST00000440647 MSX1P28360 303 aa9.01□□□□□ -0.97
CHD6-204ENST00000440647 LMOD1P29536 600 aaPredicted RBP9.01□□□□□ -0.97
CHD6-204ENST00000440647 IRS1P35568 1242 aa9.01□□□□□ -0.97
CHD6-204ENST00000440647 PLA2G4AP47712 749 aa9.01□□□□□ -0.97
CHD6-204ENST00000440647 ZNF295-AS1Q8N0V1 137 aa9.01□□□□□ -0.97
CHD6-204ENST00000440647 NUCKS1Q9H1E3 243 aaKnown RBP9.01□□□□□ -0.97
CHD6-204ENST00000440647 GPAMQ9HCL2 828 aa9.01□□□□□ -0.97
CHD6-204ENST00000440647 SCHIP1Q9P0W5 487 aaPredicted RBP9.01□□□□□ -0.97
CHD6-204ENST00000440647 ANKRD50Q9ULJ7 1429 aa9.01□□□□□ -0.97
CHD6-204ENST00000440647 NOS1P29475 1434 aa9□□□□□ -0.97
CHD6-204ENST00000440647 IGHA1P01876 353 aa9□□□□□ -0.97
CHD6-204ENST00000440647 RASA1P20936 1047 aa9□□□□□ -0.97
CHD6-204ENST00000440647 FOXK2Q01167 660 aa9□□□□□ -0.97
CHD6-204ENST00000440647 IDI1Q13907 227 aa9□□□□□ -0.97
CHD6-204ENST00000440647 GAS6Q14393 721 aa9□□□□□ -0.97
CHD6-204ENST00000440647 SIX5Q8N196 739 aa9□□□□□ -0.97
CHD6-204ENST00000440647 USP3Q9Y6I4 520 aa9□□□□□ -0.97
CHD6-204ENST00000440647 UNC13BO14795 1591 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 M0R2N6 131 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 DKK1O94907 266 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 CSB-PGBD3P0DP91 1061 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 EPHA4P54764 986 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 LBRQ14739 615 aaKnown RBP8.99□□□□□ -0.97
CHD6-204ENST00000440647 TNS4Q8IZW8 715 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 PGBD3Q8N328 593 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 C1orf216Q8TAB5 229 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 GTPBP3Q969Y2 492 aaKnown RBP8.99□□□□□ -0.97
CHD6-204ENST00000440647 VRTNQ9H8Y1 702 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 LRRC4BQ9NT99 713 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 SLC52A1Q9NWF4 448 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 CABP1Q9NZU7 370 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 RBM19Q9Y4C8 960 aaKnown RBP8.99□□□□□ -0.97
CHD6-204ENST00000440647 DNMT3AQ9Y6K1 912 aaPredicted RBP8.99□□□□□ -0.97
CHD6-204ENST00000440647 NWD1Q149M9 1564 aa8.99□□□□□ -0.97
CHD6-204ENST00000440647 NKTRP30414 1462 aaKnown RBP8.98□□□□□ -0.97
CHD6-204ENST00000440647 PHF20L1A8MW92 1017 aa8.98□□□□□ -0.97
CHD6-204ENST00000440647 PPP1R15AO75807 674 aaPredicted RBP8.98□□□□□ -0.97
CHD6-204ENST00000440647 LARP1Q6PKG0 1096 aaKnown RBP8.98□□□□□ -0.97
CHD6-204ENST00000440647 BEND7Q8N7W2 519 aaPredicted RBP8.98□□□□□ -0.97
CHD6-204ENST00000440647 AIDAQ96BJ3 306 aa8.98□□□□□ -0.97
CHD6-204ENST00000440647 ZNF594Q96JF6 807 aaPredicted RBP8.98□□□□□ -0.97
CHD6-204ENST00000440647 SLC26A8Q96RN1 970 aa8.98□□□□□ -0.97
CHD6-204ENST00000440647 RUBCNLQ9H714 662 aa8.98□□□□□ -0.97
CHD6-204ENST00000440647 TMEM94Q12767 1356 aa8.98□□□□□ -0.97
CHD6-204ENST00000440647 ROBO1Q9Y6N7 1651 aa8.97□□□□□ -0.97
CHD6-204ENST00000440647 GPR25O00155 361 aa8.97□□□□□ -0.97
CHD6-204ENST00000440647 THBS1P07996 1170 aa8.97□□□□□ -0.97
CHD6-204ENST00000440647 BCRP11274 1271 aa8.97□□□□□ -0.97
CHD6-204ENST00000440647 KCNA6P17658 529 aa8.97□□□□□ -0.97
CHD6-204ENST00000440647 CFAP70Q5T0N1 1121 aa8.97□□□□□ -0.97
CHD6-204ENST00000440647 CRISPLD1Q9H336 500 aa8.97□□□□□ -0.97
CHD6-204ENST00000440647 TMEM131LA2VDJ0 1609 aa8.97□□□□□ -0.97
CHD6-204ENST00000440647 E9PCH4 1651 aa8.97□□□□□ -0.97
CHD6-204ENST00000440647 IQGAP3Q86VI3 1631 aa8.96□□□□□ -0.98
CHD6-204ENST00000440647 SFI1A8K8P3 1242 aa8.96□□□□□ -0.98
CHD6-204ENST00000440647 MX2P20592 715 aa8.96□□□□□ -0.98
CHD6-204ENST00000440647 EFHC2Q5JST6 749 aa8.96□□□□□ -0.98
CHD6-204ENST00000440647 PODNQ7Z5L7 613 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms