RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 PLBD2Q8NHP8 589 aa23.21■■□□□ 1.31
HDAC7-213ENST00000440293 STK31Q9BXU1 1019 aa23.21■■□□□ 1.31
HDAC7-213ENST00000440293 TMX4Q9H1E5 349 aaPredicted RBP23.21■■□□□ 1.31
HDAC7-213ENST00000440293 UBN2Q6ZU65 1347 aa23.21■■□□□ 1.31
HDAC7-213ENST00000440293 E9PSI1 815 aa23.2■■□□□ 1.3
HDAC7-213ENST00000440293 NTSR2O95665 410 aa23.2■■□□□ 1.3
HDAC7-213ENST00000440293 GPTP24298 496 aa23.2■■□□□ 1.3
HDAC7-213ENST00000440293 SLC10A5Q5PT55 438 aa23.2■■□□□ 1.3
HDAC7-213ENST00000440293 MAP2K1Q02750 393 aaPredicted RBP23.19■■□□□ 1.3
HDAC7-213ENST00000440293 TCIRG1Q13488 830 aa23.19■■□□□ 1.3
HDAC7-213ENST00000440293 MAP1SQ66K74 1059 aaPredicted RBP23.19■■□□□ 1.3
HDAC7-213ENST00000440293 USP50Q70EL3 339 aaPredicted RBP23.19■■□□□ 1.3
HDAC7-213ENST00000440293 LARGE2Q8N3Y3 721 aa23.19■■□□□ 1.3
HDAC7-213ENST00000440293 NLRP3Q96P20 1036 aa23.19■■□□□ 1.3
HDAC7-213ENST00000440293 PHAXQ9H814 394 aaKnown RBP23.19■■□□□ 1.3
HDAC7-213ENST00000440293 NUP98P52948 1817 aa23.18■■□□□ 1.3
HDAC7-213ENST00000440293 PPEF1O14829 653 aaPredicted RBP23.18■■□□□ 1.3
HDAC7-213ENST00000440293 TCERG1O14776 1098 aaKnown RBP23.17■■□□□ 1.3
HDAC7-213ENST00000440293 SLFN5Q08AF3 891 aa23.17■■□□□ 1.3
HDAC7-213ENST00000440293 SUPT20HQ8NEM7 779 aa23.17■■□□□ 1.3
HDAC7-213ENST00000440293 DDX58O95786 925 aaKnown RBP23.16■■□□□ 1.3
HDAC7-213ENST00000440293 SLC4A2P04920 1241 aa23.16■■□□□ 1.3
HDAC7-213ENST00000440293 SCNN1DP51172 638 aa23.16■■□□□ 1.3
HDAC7-213ENST00000440293 RIC3Q7Z5B4 369 aa23.16■■□□□ 1.3
HDAC7-213ENST00000440293 NIM1KQ8IY84 436 aa23.16■■□□□ 1.3
HDAC7-213ENST00000440293 ATP6V0A2Q9Y487 856 aa23.16■■□□□ 1.3
HDAC7-213ENST00000440293 GJA3Q9Y6H8 435 aa23.16■■□□□ 1.3
HDAC7-213ENST00000440293 WDR33Q9C0J8 1336 aaKnown RBP23.15■■□□□ 1.3
HDAC7-213ENST00000440293 BBOX1O75936 387 aa23.15■■□□□ 1.3
HDAC7-213ENST00000440293 UTP14AQ9BVJ6 771 aaKnown RBP23.15■■□□□ 1.3
HDAC7-213ENST00000440293 RTFDC1Q9BY42 306 aaPredicted RBP23.15■■□□□ 1.3
HDAC7-213ENST00000440293 CDCA7LQ96GN5 454 aa23.14■■□□□ 1.29
HDAC7-213ENST00000440293 ECE1P42892 770 aa23.13■■□□□ 1.29
HDAC7-213ENST00000440293 ABT1Q9ULW3 272 aaKnown RBP23.13■■□□□ 1.29
HDAC7-213ENST00000440293 EPS15P42566 896 aa23.12■■□□□ 1.29
HDAC7-213ENST00000440293 NLRP10Q86W26 655 aa23.12■■□□□ 1.29
HDAC7-213ENST00000440293 ADARB2Q9NS39 739 aaKnown RBP23.12■■□□□ 1.29
HDAC7-213ENST00000440293 COL4A5P29400 1685 aa23.12■■□□□ 1.29
HDAC7-213ENST00000440293 CDHR2Q9BYE9 1310 aa23.11■■□□□ 1.29
HDAC7-213ENST00000440293 PPIP5K2O43314 1243 aa23.11■■□□□ 1.29
HDAC7-213ENST00000440293 SP8Q8IXZ3 490 aa23.11■■□□□ 1.29
HDAC7-213ENST00000440293 TRMT2AQ8IZ69 625 aaKnown RBP23.11■■□□□ 1.29
HDAC7-213ENST00000440293 ISCA1Q9BUE6 129 aa23.11■■□□□ 1.29
HDAC7-213ENST00000440293 ZNRF3Q9ULT6 936 aa23.11■■□□□ 1.29
HDAC7-213ENST00000440293 LBX1P52954 281 aa23.1■■□□□ 1.29
HDAC7-213ENST00000440293 TRIM28Q13263 835 aaKnown RBP23.1■■□□□ 1.29
HDAC7-213ENST00000440293 KSR2Q6VAB6 950 aa23.1■■□□□ 1.29
HDAC7-213ENST00000440293 G2E3Q7L622 706 aa23.1■■□□□ 1.29
HDAC7-213ENST00000440293 GPRC5DQ9NZD1 345 aa23.1■■□□□ 1.29
HDAC7-213ENST00000440293 ATP5J2-PTCD1G3V325 749 aa23.09■■□□□ 1.29
HDAC7-213ENST00000440293 HNRNPUQ00839 825 aaKnown RBP eCLIP23.09■■□□□ 1.293e-6■□□□□ 11.1
HDAC7-213ENST00000440293 C3orf67Q6ZVT6 689 aa23.09■■□□□ 1.29
HDAC7-213ENST00000440293 TMC4Q7Z404 712 aa23.09■■□□□ 1.29
HDAC7-213ENST00000440293 PI4KAP2A4QPH2 592 aa23.08■■□□□ 1.29
HDAC7-213ENST00000440293 HSPA8P11142 646 aaKnown RBP23.08■■□□□ 1.29
HDAC7-213ENST00000440293 PI4KAP1Q8N8J0 262 aa23.08■■□□□ 1.29
HDAC7-213ENST00000440293 ZC3H15Q8WU90 426 aaKnown RBP23.08■■□□□ 1.29
HDAC7-213ENST00000440293 METTL22Q9BUU2 404 aaPredicted RBP23.08■■□□□ 1.29
HDAC7-213ENST00000440293 PGAP2Q9UHJ9 254 aa23.08■■□□□ 1.29
HDAC7-213ENST00000440293 TRMT112Q9UI30 125 aaKnown RBP23.08■■□□□ 1.29
HDAC7-213ENST00000440293 ABCC4O15439 1325 aa23.08■■□□□ 1.28
HDAC7-213ENST00000440293 MAP2K2P36507 400 aa23.07■■□□□ 1.28
HDAC7-213ENST00000440293 FLIIQ13045 1269 aa23.07■■□□□ 1.28
HDAC7-213ENST00000440293 AOC3Q16853 763 aa23.07■■□□□ 1.28
HDAC7-213ENST00000440293 HHIPL1Q96JK4 782 aa23.07■■□□□ 1.28
HDAC7-213ENST00000440293 MYD88Q99836 296 aa23.07■■□□□ 1.28
HDAC7-213ENST00000440293 MAP3K2Q9Y2U5 619 aa23.07■■□□□ 1.28
HDAC7-213ENST00000440293 TLL2Q9Y6L7 1015 aa23.07■■□□□ 1.28
HDAC7-213ENST00000440293 LTBP1Q14766 1721 aa23.07■■□□□ 1.28
HDAC7-213ENST00000440293 CXCL9Q07325 125 aa23.06■■□□□ 1.28
HDAC7-213ENST00000440293 KIAA2012Q0VF49 1180 aa23.06■■□□□ 1.28
HDAC7-213ENST00000440293 TNIP1Q15025 636 aa23.06■■□□□ 1.28
HDAC7-213ENST00000440293 CST9Q5W186 159 aa23.06■■□□□ 1.28
HDAC7-213ENST00000440293 DPP8Q6V1X1 898 aaPredicted RBP23.06■■□□□ 1.28
HDAC7-213ENST00000440293 MPNDQ8N594 471 aa23.06■■□□□ 1.28
HDAC7-213ENST00000440293 CAPNS2Q96L46 248 aa23.06■■□□□ 1.28
HDAC7-213ENST00000440293 BEGAINQ9BUH8 593 aa23.06■■□□□ 1.28
HDAC7-213ENST00000440293 DDX46Q7L014 1031 aaKnown RBP23.05■■□□□ 1.28
HDAC7-213ENST00000440293 GPR101Q96P66 508 aaPredicted RBP23.05■■□□□ 1.28
HDAC7-213ENST00000440293 SH3TC1Q8TE82 1336 aa23.05■■□□□ 1.28
HDAC7-213ENST00000440293 NEXNQ0ZGT2 675 aa23.04■■□□□ 1.28
HDAC7-213ENST00000440293 FKBP5Q13451 457 aaPredicted RBP23.04■■□□□ 1.28
HDAC7-213ENST00000440293 CCDC191Q8NCU4 936 aa23.04■■□□□ 1.28
HDAC7-213ENST00000440293 ZNF428Q96B54 188 aa23.04■■□□□ 1.28
HDAC7-213ENST00000440293 GRAPQ13588 217 aa23.03■■□□□ 1.28
HDAC7-213ENST00000440293 CIAPIN1Q6FI81 312 aa23.03■■□□□ 1.28
HDAC7-213ENST00000440293 GRAPLQ8TC17 118 aaPredicted RBP23.03■■□□□ 1.28
HDAC7-213ENST00000440293 THSD7BQ9C0I4 1608 aa23.03■■□□□ 1.28
HDAC7-213ENST00000440293 CA12O43570 354 aa23.02■■□□□ 1.28
HDAC7-213ENST00000440293 CT47B1P0C2W7 299 aaPredicted RBP23.02■■□□□ 1.28
HDAC7-213ENST00000440293 HCLS1P14317 486 aaPredicted RBP23.01■■□□□ 1.27
HDAC7-213ENST00000440293 SAPCD2Q86UD0 394 aa23.01■■□□□ 1.27
HDAC7-213ENST00000440293 FAM89AQ96GI7 184 aa23.01■■□□□ 1.27
HDAC7-213ENST00000440293 CWC25Q9NXE8 425 aaPredicted RBP23.01■■□□□ 1.27
HDAC7-213ENST00000440293 GMPSP49915 693 aaPredicted RBP23■■□□□ 1.27
HDAC7-213ENST00000440293 ZBTB38Q8NAP3 1195 aaPredicted RBP23■■□□□ 1.27
HDAC7-213ENST00000440293 DNAAF4Q8WXU2 420 aa23■■□□□ 1.27
HDAC7-213ENST00000440293 TRAF5O00463 557 aa22.99■■□□□ 1.27
HDAC7-213ENST00000440293 CYP4F22Q6NT55 531 aa22.99■■□□□ 1.27
HDAC7-213ENST00000440293 CDC37L1Q7L3B6 337 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms