RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 RAD17O75943 681 aa27.14■■□□□ 1.94
TRIM39-210ENST00000440271 SLC34A2O95436 690 aa27.14■■□□□ 1.94
TRIM39-210ENST00000440271 ANXA1P04083 346 aa27.14■■□□□ 1.94
TRIM39-210ENST00000440271 RGS19P49795 217 aa27.14■■□□□ 1.94
TRIM39-210ENST00000440271 HIRAP54198 1017 aaPredicted RBP27.14■■□□□ 1.94
TRIM39-210ENST00000440271 MLLT1Q03111 559 aaPredicted RBP27.14■■□□□ 1.94
TRIM39-210ENST00000440271 TNIP1Q15025 636 aa27.14■■□□□ 1.94
TRIM39-210ENST00000440271 PROSER3Q2NL68 480 aa27.14■■□□□ 1.94
TRIM39-210ENST00000440271 ZC3H15Q8WU90 426 aaKnown RBP27.14■■□□□ 1.94
TRIM39-210ENST00000440271 CDHR2Q9BYE9 1310 aa27.14■■□□□ 1.93
TRIM39-210ENST00000440271 MAPK8IP3Q9UPT6 1336 aa27.14■■□□□ 1.93
TRIM39-210ENST00000440271 CA12O43570 354 aa27.13■■□□□ 1.93
TRIM39-210ENST00000440271 HCLS1P14317 486 aaPredicted RBP27.13■■□□□ 1.93
TRIM39-210ENST00000440271 CDC37L1Q7L3B6 337 aa27.12■■□□□ 1.93
TRIM39-210ENST00000440271 ZNF408Q9H9D4 720 aa27.12■■□□□ 1.93
TRIM39-210ENST00000440271 BRPF1P55201 1214 aaPredicted RBP27.11■■□□□ 1.93
TRIM39-210ENST00000440271 DDX46Q7L014 1031 aaKnown RBP27.11■■□□□ 1.93
TRIM39-210ENST00000440271 NLRP10Q86W26 655 aa27.11■■□□□ 1.93
TRIM39-210ENST00000440271 HSP90AB3PQ58FF7 597 aa27.1■■□□□ 1.93
TRIM39-210ENST00000440271 COPS6Q7L5N1 327 aa27.1■■□□□ 1.93
TRIM39-210ENST00000440271 TRPM4Q8TD43 1214 aa27.1■■□□□ 1.93
TRIM39-210ENST00000440271 CNOT7Q9UIV1 285 aaKnown RBP27.1■■□□□ 1.93
TRIM39-210ENST00000440271 GRAPQ13588 217 aa27.09■■□□□ 1.93
TRIM39-210ENST00000440271 GRAPLQ8TC17 118 aaPredicted RBP27.09■■□□□ 1.93
TRIM39-210ENST00000440271 TRMT112Q9UI30 125 aaKnown RBP27.09■■□□□ 1.93
TRIM39-210ENST00000440271 YDJCA8MPS7 323 aa27.08■■□□□ 1.93
TRIM39-210ENST00000440271 AIMP1Q12904 312 aaKnown RBP27.08■■□□□ 1.93
TRIM39-210ENST00000440271 TCIRG1Q13488 830 aa27.08■■□□□ 1.93
TRIM39-210ENST00000440271 MCOLN1Q9GZU1 580 aa27.08■■□□□ 1.93
TRIM39-210ENST00000440271 SHTN1A0MZ66 631 aa27.07■■□□□ 1.92
TRIM39-210ENST00000440271 H7C1D1 291 aa27.07■■□□□ 1.92
TRIM39-210ENST00000440271 RIPK4P57078 832 aa27.07■■□□□ 1.92
TRIM39-210ENST00000440271 XAGE3Q8WTP9 111 aa27.07■■□□□ 1.92
TRIM39-210ENST00000440271 BABAM1Q9NWV8 329 aa27.07■■□□□ 1.92
TRIM39-210ENST00000440271 SH3TC1Q8TE82 1336 aa27.07■■□□□ 1.92
TRIM39-210ENST00000440271 USP48Q86UV5 1035 aa27.06■■□□□ 1.92
TRIM39-210ENST00000440271 NECTIN2Q92692 538 aa27.06■■□□□ 1.92
TRIM39-210ENST00000440271 MICALL2Q8IY33 904 aa27.05■■□□□ 1.92
TRIM39-210ENST00000440271 LAMB2P55268 1798 aa27.04■■□□□ 1.92
TRIM39-210ENST00000440271 ANKRD36CQ5JPF3 1778 aa27.04■■□□□ 1.92
TRIM39-210ENST00000440271 TMC4Q7Z404 712 aa27.04■■□□□ 1.92
TRIM39-210ENST00000440271 ZIC5Q96T25 663 aa27.04■■□□□ 1.92
TRIM39-210ENST00000440271 ZBTB12Q9Y330 459 aaPredicted RBP27.04■■□□□ 1.92
TRIM39-210ENST00000440271 NOGQ13253 232 aa27.03■■□□□ 1.92
TRIM39-210ENST00000440271 DPF2Q92785 391 aa27.03■■□□□ 1.92
TRIM39-210ENST00000440271 CFAP44Q96MT7 982 aa27.03■■□□□ 1.92
TRIM39-210ENST00000440271 CASP8AP2Q9UKL3 1982 aa27.02■■□□□ 1.92
TRIM39-210ENST00000440271 HUNKP57058 714 aa27.02■■□□□ 1.92
TRIM39-210ENST00000440271 DLK2Q6UY11 383 aa27.02■■□□□ 1.92
TRIM39-210ENST00000440271 DGKZQ13574 1117 aa27.01■■□□□ 1.91
TRIM39-210ENST00000440271 WASHC4Q2M389 1173 aa27.01■■□□□ 1.91
TRIM39-210ENST00000440271 SAMD7Q7Z3H4 446 aa27.01■■□□□ 1.91
TRIM39-210ENST00000440271 ZNF428Q96B54 188 aa27.01■■□□□ 1.91
TRIM39-210ENST00000440271 PSMD14O00487 310 aa27■■□□□ 1.91
TRIM39-210ENST00000440271 NSFL1CQ9UNZ2 370 aaKnown RBP27■■□□□ 1.91
TRIM39-210ENST00000440271 DUOX1Q9NRD9 1551 aa27■■□□□ 1.91
TRIM39-210ENST00000440271 TAF1P21675 1872 aa26.99■■□□□ 1.91
TRIM39-210ENST00000440271 TMPOP42166 694 aaKnown RBP26.98■■□□□ 1.91
TRIM39-210ENST00000440271 DBNDD1Q9H9R9 158 aa26.98■■□□□ 1.91
TRIM39-210ENST00000440271 RIMBP2O15034 1052 aa26.97■■□□□ 1.91
TRIM39-210ENST00000440271 LMOD3Q0VAK6 560 aa26.97■■□□□ 1.91
TRIM39-210ENST00000440271 TBC1D10BQ4KMP7 808 aaPredicted RBP26.97■■□□□ 1.91
TRIM39-210ENST00000440271 KRT26Q7Z3Y9 468 aa26.97■■□□□ 1.91
TRIM39-210ENST00000440271 CELF1Q92879 486 aaKnown RBP26.97■■□□□ 1.91
TRIM39-210ENST00000440271 EGFRP00533 1210 aa26.96■■□□□ 1.91
TRIM39-210ENST00000440271 SF3B3Q15393 1217 aaKnown RBP26.96■■□□□ 1.91
TRIM39-210ENST00000440271 KRT24Q2M2I5 525 aa26.96■■□□□ 1.91
TRIM39-210ENST00000440271 RGMBQ6NW40 437 aa26.96■■□□□ 1.91
TRIM39-210ENST00000440271 POLLQ9UGP5 575 aa26.96■■□□□ 1.91
TRIM39-210ENST00000440271 FAM155AB1AL88 458 aaPredicted RBP26.95■■□□□ 1.9
TRIM39-210ENST00000440271 C6orf229H3BNL8 230 aa26.95■■□□□ 1.9
TRIM39-210ENST00000440271 RBM26Q5T8P6 1007 aaKnown RBP26.95■■□□□ 1.9
TRIM39-210ENST00000440271 PLBD2Q8NHP8 589 aa26.95■■□□□ 1.9
TRIM39-210ENST00000440271 FAM89AQ96GI7 184 aa26.95■■□□□ 1.9
TRIM39-210ENST00000440271 GBA2Q9HCG7 927 aaPredicted RBP26.95■■□□□ 1.9
TRIM39-210ENST00000440271 CHPF2Q9P2E5 772 aa26.95■■□□□ 1.9
TRIM39-210ENST00000440271 LRRC37AA6NMS7 1700 aa26.94■■□□□ 1.9
TRIM39-210ENST00000440271 CHL1O00533 1208 aa26.94■■□□□ 1.9
TRIM39-210ENST00000440271 RPS12P25398 132 aaKnown RBP26.94■■□□□ 1.9
TRIM39-210ENST00000440271 GPSM2P81274 684 aa26.94■■□□□ 1.9
TRIM39-210ENST00000440271 ANKRD13DQ6ZTN6 518 aa26.94■■□□□ 1.9
TRIM39-210ENST00000440271 C2orf69Q8N8R5 385 aa26.94■■□□□ 1.9
TRIM39-210ENST00000440271 DCPSQ96C86 337 aaKnown RBP26.94■■□□□ 1.9
TRIM39-210ENST00000440271 KCNQ5Q9NR82 932 aa26.94■■□□□ 1.9
TRIM39-210ENST00000440271 CCDC102AQ96A19 550 aa26.93■■□□□ 1.9
TRIM39-210ENST00000440271 ISCA1Q9BUE6 129 aa26.93■■□□□ 1.9
TRIM39-210ENST00000440271 ADM5C9JUS6 153 aa26.92■■□□□ 1.9
TRIM39-210ENST00000440271 ECE2O60344 883 aa26.92■■□□□ 1.9
TRIM39-210ENST00000440271 DOK7Q18PE1 504 aa26.92■■□□□ 1.9
TRIM39-210ENST00000440271 ATP5J2-PTCD1G3V325 749 aa26.91■■□□□ 1.9
TRIM39-210ENST00000440271 KIF23Q02241 960 aaPredicted RBP26.91■■□□□ 1.9
TRIM39-210ENST00000440271 EYA3Q99504 573 aa26.91■■□□□ 1.9
TRIM39-210ENST00000440271 SAGE1Q9NXZ1 904 aa26.91■■□□□ 1.9
TRIM39-210ENST00000440271 RTL9Q8NET4 1388 aa26.91■■□□□ 1.9
TRIM39-210ENST00000440271 ZNF157P51786 506 aaPredicted RBP26.9■■□□□ 1.9
TRIM39-210ENST00000440271 NEUROD2Q15784 382 aa26.9■■□□□ 1.9
TRIM39-210ENST00000440271 LAS1LQ9Y4W2 734 aaKnown RBP26.9■■□□□ 1.9
TRIM39-210ENST00000440271 DDX60Q8IY21 1712 aaKnown RBP26.9■■□□□ 1.9
TRIM39-210ENST00000440271 RTL5Q5HYW3 569 aaPredicted RBP26.89■■□□□ 1.9
TRIM39-210ENST00000440271 HDGFL1Q5TGJ6 251 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms