RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-213ENST00000439732 ATF7IPQ6VMQ6 1270 aa12.01□□□□□ -0.49
SMARCA2-213ENST00000439732 GRAPLQ8TC17 118 aaPredicted RBP12.01□□□□□ -0.49
SMARCA2-213ENST00000439732 C7orf43Q8WVR3 580 aa12.01□□□□□ -0.49
SMARCA2-213ENST00000439732 ZNF219Q9P2Y4 722 aaPredicted RBP12.01□□□□□ -0.49
SMARCA2-213ENST00000439732 SLX4Q8IY92 1834 aa12.01□□□□□ -0.49
SMARCA2-213ENST00000439732 CASP7P55210 303 aa12□□□□□ -0.49
SMARCA2-213ENST00000439732 CTSWP56202 376 aa12□□□□□ -0.49
SMARCA2-213ENST00000439732 RPS8P62241 208 aaKnown RBP12□□□□□ -0.49
SMARCA2-213ENST00000439732 CCDC93Q567U6 631 aa12□□□□□ -0.49
SMARCA2-213ENST00000439732 RCAN3Q9UKA8 241 aa12□□□□□ -0.49
SMARCA2-213ENST00000439732 COL11A2P13942 1736 aaPredicted RBP12□□□□□ -0.49
SMARCA2-213ENST00000439732 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
SMARCA2-213ENST00000439732 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
SMARCA2-213ENST00000439732 SP8Q8IXZ3 490 aa11.99□□□□□ -0.49
SMARCA2-213ENST00000439732 TTLL11Q8NHH1 800 aa11.99□□□□□ -0.49
SMARCA2-213ENST00000439732 CDC5LQ99459 802 aaKnown RBP11.99□□□□□ -0.49
SMARCA2-213ENST00000439732 ATP6V0A2Q9Y487 856 aa11.99□□□□□ -0.49
SMARCA2-213ENST00000439732 UTYO14607 1347 aa11.99□□□□□ -0.49
SMARCA2-213ENST00000439732 ABCC4O15439 1325 aa11.99□□□□□ -0.49
SMARCA2-213ENST00000439732 MYH3P11055 1940 aa11.98□□□□□ -0.49
SMARCA2-213ENST00000439732 LAMB2P55268 1798 aa11.98□□□□□ -0.49
SMARCA2-213ENST00000439732 DDX60Q8IY21 1712 aaKnown RBP11.98□□□□□ -0.49
SMARCA2-213ENST00000439732 TNRC6CQ9HCJ0 1690 aaKnown RBP11.98□□□□□ -0.49
SMARCA2-213ENST00000439732 CSF1RP07333 972 aa11.98□□□□□ -0.49
SMARCA2-213ENST00000439732 TRIM27P14373 513 aa11.98□□□□□ -0.49
SMARCA2-213ENST00000439732 LMNB1P20700 586 aa11.98□□□□□ -0.49
SMARCA2-213ENST00000439732 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
SMARCA2-213ENST00000439732 USP44Q9H0E7 712 aa11.98□□□□□ -0.49
SMARCA2-213ENST00000439732 RTL9Q8NET4 1388 aa11.97□□□□□ -0.49
SMARCA2-213ENST00000439732 LTBP3Q9NS15 1303 aa11.97□□□□□ -0.49
SMARCA2-213ENST00000439732 GNAI3P08754 354 aa11.97□□□□□ -0.49
SMARCA2-213ENST00000439732 ANKRD18AQ8IVF6 992 aa11.97□□□□□ -0.49
SMARCA2-213ENST00000439732 FTSJ3Q8IY81 847 aaKnown RBP11.97□□□□□ -0.49
SMARCA2-213ENST00000439732 DZIP1LQ8IYY4 767 aaKnown RBP11.97□□□□□ -0.49
SMARCA2-213ENST00000439732 TAOK3Q9H2K8 898 aa11.97□□□□□ -0.49
SMARCA2-213ENST00000439732 CACNA1SQ13698 1873 aa11.97□□□□□ -0.49
SMARCA2-213ENST00000439732 ANKRD18BA2A2Z9 1011 aa11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 NBPF7P0C2Y1 421 aaPredicted RBP11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 UBTFL1P0CB47 393 aaPredicted RBP11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 YY1P25490 414 aa11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 FOXO4P98177 505 aa11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 FKBP4Q02790 459 aaKnown RBP eCLIP11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 IFIT5Q13325 482 aaKnown RBP11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 LMBR1LQ6UX01 489 aa11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 SUPT20HQ8NEM7 779 aa11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 CCDC85AQ96PX6 553 aaPredicted RBP11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 PSMD1Q99460 953 aa11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 VPS33BQ9H267 617 aa11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 GREM2Q9H772 168 aa11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 SEC31BQ9NQW1 1179 aa11.96□□□□□ -0.49
SMARCA2-213ENST00000439732 NFKBIEO00221 500 aa11.95□□□□□ -0.5
SMARCA2-213ENST00000439732 ITGA6P23229 1130 aa11.95□□□□□ -0.5
SMARCA2-213ENST00000439732 IGHMBP2P38935 993 aaKnown RBP11.95□□□□□ -0.5
SMARCA2-213ENST00000439732 CCDC57Q2TAC2 916 aa11.95□□□□□ -0.5
SMARCA2-213ENST00000439732 C9orf131Q5VYM1 1079 aa11.95□□□□□ -0.5
SMARCA2-213ENST00000439732 DPP8Q6V1X1 898 aaPredicted RBP11.95□□□□□ -0.5
SMARCA2-213ENST00000439732 MPNDQ8N594 471 aa11.95□□□□□ -0.5
SMARCA2-213ENST00000439732 CELF1Q92879 486 aaKnown RBP11.95□□□□□ -0.5
SMARCA2-213ENST00000439732 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
SMARCA2-213ENST00000439732 BSDC1Q9NW68 430 aaPredicted RBP11.95□□□□□ -0.5
SMARCA2-213ENST00000439732 CHMP3Q9Y3E7 222 aa11.95□□□□□ -0.5
SMARCA2-213ENST00000439732 SBF1O95248 1867 aa11.94□□□□□ -0.5
SMARCA2-213ENST00000439732 TAF1P21675 1872 aa11.94□□□□□ -0.5
SMARCA2-213ENST00000439732 FER1L6Q2WGJ9 1857 aa11.94□□□□□ -0.5
SMARCA2-213ENST00000439732 TAF7LQ5H9L4 462 aa11.94□□□□□ -0.5
SMARCA2-213ENST00000439732 SUCLG2Q96I99 432 aa11.94□□□□□ -0.5
SMARCA2-213ENST00000439732 MPHOSPH8Q99549 860 aa11.94□□□□□ -0.5
SMARCA2-213ENST00000439732 RNF181Q9P0P0 153 aa11.94□□□□□ -0.5
SMARCA2-213ENST00000439732 ZC3H4Q9UPT8 1303 aaKnown RBP11.93□□□□□ -0.5
SMARCA2-213ENST00000439732 FAM161AQ3B820 660 aa11.93□□□□□ -0.5
SMARCA2-213ENST00000439732 EPHA10Q5JZY3 1008 aa11.93□□□□□ -0.5
SMARCA2-213ENST00000439732 OLFM4Q6UX06 510 aa11.93□□□□□ -0.5
SMARCA2-213ENST00000439732 TMEM57Q8N5G2 664 aa11.93□□□□□ -0.5
SMARCA2-213ENST00000439732 RTFDC1Q9BY42 306 aaPredicted RBP11.93□□□□□ -0.5
SMARCA2-213ENST00000439732 CHMP4BQ9H444 224 aaKnown RBP11.93□□□□□ -0.5
SMARCA2-213ENST00000439732 ANKIB1Q9P2G1 1089 aa11.93□□□□□ -0.5
SMARCA2-213ENST00000439732 NSFL1CQ9UNZ2 370 aaKnown RBP11.93□□□□□ -0.5
SMARCA2-213ENST00000439732 CCDC88AQ3V6T2 1871 aa11.93□□□□□ -0.5
SMARCA2-213ENST00000439732 RASSF7Q02833 373 aa11.92□□□□□ -0.5
SMARCA2-213ENST00000439732 RABL6Q3YEC7 729 aaPredicted RBP11.92□□□□□ -0.5
SMARCA2-213ENST00000439732 JDP2Q8WYK2 163 aa11.92□□□□□ -0.5
SMARCA2-213ENST00000439732 KAZALD1Q96I82 304 aa11.92□□□□□ -0.5
SMARCA2-213ENST00000439732 ANKRD2Q9GZV1 360 aa11.92□□□□□ -0.5
SMARCA2-213ENST00000439732 BICC1Q9H694 974 aaKnown RBP11.92□□□□□ -0.5
SMARCA2-213ENST00000439732 ZNF277Q9NRM2 450 aaPredicted RBP11.92□□□□□ -0.5
SMARCA2-213ENST00000439732 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
SMARCA2-213ENST00000439732 C6orf229H3BNL8 230 aa11.91□□□□□ -0.5
SMARCA2-213ENST00000439732 GNAI2P04899 355 aa11.91□□□□□ -0.5
SMARCA2-213ENST00000439732 PDE3AQ14432 1141 aa11.91□□□□□ -0.5
SMARCA2-213ENST00000439732 ITPRIPQ8IWB1 547 aa11.91□□□□□ -0.5
SMARCA2-213ENST00000439732 EYA3Q99504 573 aa11.91□□□□□ -0.5
SMARCA2-213ENST00000439732 MEIS3Q99687 375 aa11.91□□□□□ -0.5
SMARCA2-213ENST00000439732 GGA1Q9UJY5 639 aa11.91□□□□□ -0.5
SMARCA2-213ENST00000439732 MINPP1Q9UNW1 487 aa11.91□□□□□ -0.5
SMARCA2-213ENST00000439732 XDHP47989 1333 aa11.9□□□□□ -0.5
SMARCA2-213ENST00000439732 DICER1Q9UPY3 1922 aaKnown RBP11.9□□□□□ -0.5
SMARCA2-213ENST00000439732 IARSP41252 1262 aaKnown RBP11.9□□□□□ -0.5
SMARCA2-213ENST00000439732 DPY19L2Q6NUT2 758 aa11.9□□□□□ -0.5
SMARCA2-213ENST00000439732 LDHAL6AQ6ZMR3 332 aa11.9□□□□□ -0.5
SMARCA2-213ENST00000439732 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms