RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 LUZP1Q86V48 1076 aa18.09■□□□□ 0.49
CDC42EP4-202ENST00000439510 ANKRD7Q92527 254 aa18.09■□□□□ 0.49
CDC42EP4-202ENST00000439510 EAF2Q96CJ1 260 aaPredicted RBP18.09■□□□□ 0.49
CDC42EP4-202ENST00000439510 TNMDQ9H2S6 317 aa18.09■□□□□ 0.49
CDC42EP4-202ENST00000439510 GCP02774 474 aa18.08■□□□□ 0.48
CDC42EP4-202ENST00000439510 PTGS1P23219 599 aa18.08■□□□□ 0.48
CDC42EP4-202ENST00000439510 TOB2Q14106 344 aaPredicted RBP18.08■□□□□ 0.48
CDC42EP4-202ENST00000439510 CAMK4Q16566 473 aa18.08■□□□□ 0.48
CDC42EP4-202ENST00000439510 UTP14CQ5TAP6 766 aaKnown RBP18.08■□□□□ 0.48
CDC42EP4-202ENST00000439510 DACT1Q9NYF0 836 aa18.08■□□□□ 0.48
CDC42EP4-202ENST00000439510 SIPA1L3O60292 1781 aaPredicted RBP18.08■□□□□ 0.48
CDC42EP4-202ENST00000439510 A0A0D9SFI3 127 aa18.08■□□□□ 0.48
CDC42EP4-202ENST00000439510 FAM173BQ6P4H8 233 aa18.08■□□□□ 0.48
CDC42EP4-202ENST00000439510 CLSTN2Q9H4D0 955 aa18.08■□□□□ 0.48
CDC42EP4-202ENST00000439510 CBX8Q9HC52 389 aa18.08■□□□□ 0.48
CDC42EP4-202ENST00000439510 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.08■□□□□ 0.48
CDC42EP4-202ENST00000439510 KAZALD1Q96I82 304 aa18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 SPATA32Q96LK8 384 aa18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 HMG20BQ9P0W2 317 aa18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 ALS2Q96Q42 1657 aa18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 FAM177BA6PVY3 158 aa18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 ZSCAN20P17040 1043 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 DMTNQ08495 405 aa18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 CWF19L2Q2TBE0 894 aaKnown RBP18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 ANO6Q4KMQ2 910 aa18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 PLA2G4DQ86XP0 818 aa18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 LEO1Q8WVC0 666 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 PXDNQ92626 1479 aa18.07■□□□□ 0.48
CDC42EP4-202ENST00000439510 GIGYF1O75420 1035 aaPredicted RBP18.06■□□□□ 0.48
CDC42EP4-202ENST00000439510 PROSER3Q2NL68 480 aa18.06■□□□□ 0.48
CDC42EP4-202ENST00000439510 PPP4R3BQ5MIZ7 849 aa18.06■□□□□ 0.48
CDC42EP4-202ENST00000439510 TDRD7Q8NHU6 1098 aaKnown RBP18.06■□□□□ 0.48
CDC42EP4-202ENST00000439510 GRM8O00222 908 aa18.06■□□□□ 0.48
CDC42EP4-202ENST00000439510 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
CDC42EP4-202ENST00000439510 LINS1Q8NG48 757 aa18.06■□□□□ 0.48
CDC42EP4-202ENST00000439510 SUCLG2Q96I99 432 aa18.06■□□□□ 0.48
CDC42EP4-202ENST00000439510 CHMP3Q9Y3E7 222 aa18.06■□□□□ 0.48
CDC42EP4-202ENST00000439510 ZNF530Q6P9A1 599 aaPredicted RBP18.05■□□□□ 0.48
CDC42EP4-202ENST00000439510 CKAP2LQ8IYA6 745 aa18.05■□□□□ 0.48
CDC42EP4-202ENST00000439510 MYH15Q9Y2K3 1946 aa18.05■□□□□ 0.48
CDC42EP4-202ENST00000439510 G3BP1Q13283 466 aaKnown RBP eCLIP18.05■□□□□ 0.48
CDC42EP4-202ENST00000439510 TAF6LQ9Y6J9 622 aa18.05■□□□□ 0.48
CDC42EP4-202ENST00000439510 GOLGA6L4A6NEF3 574 aa18.05■□□□□ 0.48
CDC42EP4-202ENST00000439510 ZNF75DP51815 510 aa18.05■□□□□ 0.48
CDC42EP4-202ENST00000439510 PDCL2Q8N4E4 241 aa18.05■□□□□ 0.48
CDC42EP4-202ENST00000439510 BICC1Q9H694 974 aaKnown RBP18.05■□□□□ 0.48
CDC42EP4-202ENST00000439510 ATP2B3Q16720 1220 aa18.04■□□□□ 0.48
CDC42EP4-202ENST00000439510 MPRIPQ6WCQ1 1025 aa18.04■□□□□ 0.48
CDC42EP4-202ENST00000439510 CCDC186Q7Z3E2 898 aa18.04■□□□□ 0.48
CDC42EP4-202ENST00000439510 FSD1Q9BTV5 496 aa18.04■□□□□ 0.48
CDC42EP4-202ENST00000439510 CCDC8Q9H0W5 538 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP4-202ENST00000439510 PRDM10Q9NQV6 1147 aa18.04■□□□□ 0.48
CDC42EP4-202ENST00000439510 TLR7Q9NYK1 1049 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-202ENST00000439510 RNMTO43148 476 aaKnown RBP18.04■□□□□ 0.48
CDC42EP4-202ENST00000439510 PIP4K2BP78356 416 aa18.04■□□□□ 0.48
CDC42EP4-202ENST00000439510 PLEKHO1Q53GL0 409 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP4-202ENST00000439510 USPL1Q5W0Q7 1092 aa18.04■□□□□ 0.48
CDC42EP4-202ENST00000439510 TCEANC2Q96MN5 208 aa18.04■□□□□ 0.48
CDC42EP4-202ENST00000439510 TNS3Q68CZ2 1445 aa18.03■□□□□ 0.48
CDC42EP4-202ENST00000439510 TFIP11Q9UBB9 837 aaKnown RBP18.03■□□□□ 0.48
CDC42EP4-202ENST00000439510 SPATA31A3Q5VYP0 1347 aa18.03■□□□□ 0.48
CDC42EP4-202ENST00000439510 CAVIN2O95810 425 aa18.03■□□□□ 0.48
CDC42EP4-202ENST00000439510 AMOTQ4VCS5 1084 aa18.03■□□□□ 0.48
CDC42EP4-202ENST00000439510 TAF7LQ5H9L4 462 aa18.03■□□□□ 0.48
CDC42EP4-202ENST00000439510 KCNH5Q8NCM2 988 aa18.03■□□□□ 0.48
CDC42EP4-202ENST00000439510 PGBD1Q96JS3 809 aa18.03■□□□□ 0.48
CDC42EP4-202ENST00000439510 SYCP1Q15431 976 aa18.02■□□□□ 0.48
CDC42EP4-202ENST00000439510 ZSCAN25Q6NSZ9 544 aa18.02■□□□□ 0.48
CDC42EP4-202ENST00000439510 ZNF589Q86UQ0 364 aaPredicted RBP18.02■□□□□ 0.48
CDC42EP4-202ENST00000439510 BOLA2Q9H3K6 86 aa18.02■□□□□ 0.48
CDC42EP4-202ENST00000439510 ADAMTS7Q9UKP4 1686 aa18.02■□□□□ 0.48
CDC42EP4-202ENST00000439510 NR1I2O75469 434 aa18.02■□□□□ 0.48
CDC42EP4-202ENST00000439510 GTF3C6Q969F1 213 aa18.02■□□□□ 0.48
CDC42EP4-202ENST00000439510 RGPD5Q99666 1765 aa18.02■□□□□ 0.47
CDC42EP4-202ENST00000439510 TAF5LO75529 589 aa18.01■□□□□ 0.47
CDC42EP4-202ENST00000439510 RESTQ13127 1097 aa18.01■□□□□ 0.47
CDC42EP4-202ENST00000439510 KRT32Q14532 448 aa18.01■□□□□ 0.47
CDC42EP4-202ENST00000439510 TRIM5Q9C035 493 aa18.01■□□□□ 0.47
CDC42EP4-202ENST00000439510 ROBO1Q9Y6N7 1651 aa18.01■□□□□ 0.47
CDC42EP4-202ENST00000439510 CDC25BP30305 580 aa18.01■□□□□ 0.47
CDC42EP4-202ENST00000439510 CBX1P83916 185 aa18.01■□□□□ 0.47
CDC42EP4-202ENST00000439510 LRMPQ12912 555 aa18.01■□□□□ 0.47
CDC42EP4-202ENST00000439510 CHRNA2Q15822 529 aa18.01■□□□□ 0.47
CDC42EP4-202ENST00000439510 ZNF165P49910 485 aa18.01■□□□□ 0.47
CDC42EP4-202ENST00000439510 NRBP1Q9UHY1 535 aa18.01■□□□□ 0.47
CDC42EP4-202ENST00000439510 AXIN2Q9Y2T1 843 aa18.01■□□□□ 0.47
CDC42EP4-202ENST00000439510 CAMTA1Q9Y6Y1 1673 aa18■□□□□ 0.47
CDC42EP4-202ENST00000439510 SMTNL1A8MU46 457 aa18■□□□□ 0.47
CDC42EP4-202ENST00000439510 DDX58O95786 925 aaKnown RBP18■□□□□ 0.47
CDC42EP4-202ENST00000439510 DRC7Q8IY82 874 aa18■□□□□ 0.47
CDC42EP4-202ENST00000439510 LRRC59Q96AG4 307 aaKnown RBP18■□□□□ 0.47
CDC42EP4-202ENST00000439510 GTPBP4Q9BZE4 634 aaKnown RBP18■□□□□ 0.47
CDC42EP4-202ENST00000439510 SLIT3O75094 1523 aa17.99■□□□□ 0.47
CDC42EP4-202ENST00000439510 STK3Q13188 491 aa17.99■□□□□ 0.47
CDC42EP4-202ENST00000439510 ARHGEF25Q86VW2 580 aa17.99■□□□□ 0.47
CDC42EP4-202ENST00000439510 DDX21Q9NR30 783 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDC42EP4-202ENST00000439510 SOS2Q07890 1332 aaPredicted RBP17.99■□□□□ 0.47
CDC42EP4-202ENST00000439510 COL15A1P39059 1388 aa17.99■□□□□ 0.47
CDC42EP4-202ENST00000439510 RFX7Q2KHR2 1363 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms