RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 RBM10P98175 930 aaKnown RBP14.36□□□□□ -0.11
TCOF1-205ENST00000439160 CCAR1Q8IX12 1150 aaKnown RBP14.36□□□□□ -0.11
TCOF1-205ENST00000439160 USP26Q9BXU7 913 aa14.36□□□□□ -0.11
TCOF1-205ENST00000439160 AATKQ6ZMQ8 1374 aa14.36□□□□□ -0.11
TCOF1-205ENST00000439160 MCM5P33992 734 aa14.35□□□□□ -0.11
TCOF1-205ENST00000439160 IARSP41252 1262 aaKnown RBP14.35□□□□□ -0.11
TCOF1-205ENST00000439160 SYNMO15061 1565 aa14.35□□□□□ -0.11
TCOF1-205ENST00000439160 TET3O43151 1660 aa14.35□□□□□ -0.11
TCOF1-205ENST00000439160 KLF18A0A0U1RQI7 1052 aa14.35□□□□□ -0.11
TCOF1-205ENST00000439160 SNX21Q969T3 373 aa14.35□□□□□ -0.11
TCOF1-205ENST00000439160 ZNF594Q96JF6 807 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-205ENST00000439160 PRKCSHP14314 528 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-205ENST00000439160 ZNF622Q969S3 477 aaKnown RBP eCLIP14.35□□□□□ -0.111e-6■■□□□ 12.3
TCOF1-205ENST00000439160 DBNDD2Q9BQY9 259 aa14.35□□□□□ -0.11
TCOF1-205ENST00000439160 HCLS1P14317 486 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-205ENST00000439160 CHST3Q7LGC8 479 aa14.35□□□□□ -0.11
TCOF1-205ENST00000439160 USP44Q9H0E7 712 aa14.35□□□□□ -0.11
TCOF1-205ENST00000439160 IQGAP3Q86VI3 1631 aa14.35□□□□□ -0.11
TCOF1-205ENST00000439160 TSPY2A6NKD2 308 aa14.34□□□□□ -0.11
TCOF1-205ENST00000439160 CPA1P15085 419 aa14.34□□□□□ -0.11
TCOF1-205ENST00000439160 GCKRQ14397 625 aa14.34□□□□□ -0.11
TCOF1-205ENST00000439160 CCDC183Q5T5S1 534 aa14.34□□□□□ -0.11
TCOF1-205ENST00000439160 ZGPATQ8N5A5 531 aaKnown RBP14.34□□□□□ -0.11
TCOF1-205ENST00000439160 RBM27Q9P2N5 1060 aaKnown RBP14.34□□□□□ -0.11
TCOF1-205ENST00000439160 USP6P35125 1406 aa14.34□□□□□ -0.11
TCOF1-205ENST00000439160 METAP2P50579 478 aaKnown RBP eCLIP14.34□□□□□ -0.113e-8■■□□□ 13.7
TCOF1-205ENST00000439160 ABCC4O15439 1325 aa14.34□□□□□ -0.11
TCOF1-205ENST00000439160 CATIPQ7Z7H3 387 aa14.34□□□□□ -0.11
TCOF1-205ENST00000439160 MAGEC2Q9UBF1 373 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-205ENST00000439160 RTCBQ9Y3I0 505 aaKnown RBP14.34□□□□□ -0.11
TCOF1-205ENST00000439160 PHKG2P15735 406 aa14.34□□□□□ -0.11
TCOF1-205ENST00000439160 SSRP1Q08945 709 aaKnown RBP14.34□□□□□ -0.11
TCOF1-205ENST00000439160 TPTE2Q6XPS3 522 aa14.34□□□□□ -0.11
TCOF1-205ENST00000439160 Q6ZUG5 572 aa14.34□□□□□ -0.11
TCOF1-205ENST00000439160 ARHGEF25Q86VW2 580 aa14.34□□□□□ -0.11
TCOF1-205ENST00000439160 GOLGA6L1Q8N7Z2 621 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 MNS1Q8NEH6 495 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 SLC4A4Q9Y6R1 1079 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 ATP7BP35670 1465 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 EYA2O00167 538 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 AK2P54819 239 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 ARAP3Q8WWN8 1544 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 A0A1B0GUL7 405 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 LDHCP07864 332 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 CREB3L3Q68CJ9 461 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 NDUFB9Q9Y6M9 179 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 ARHGAP31Q2M1Z3 1444 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 CLTCL1P53675 1640 aa14.33□□□□□ -0.12
TCOF1-205ENST00000439160 CCDC191Q8NCU4 936 aa14.32□□□□□ -0.12
TCOF1-205ENST00000439160 SEC63Q9UGP8 760 aaKnown RBP14.32□□□□□ -0.12
TCOF1-205ENST00000439160 BAG3O95817 575 aa14.32□□□□□ -0.12
TCOF1-205ENST00000439160 FAM98CQ17RN3 349 aaKnown RBP14.32□□□□□ -0.12
TCOF1-205ENST00000439160 SLC26A6Q9BXS9 759 aa14.32□□□□□ -0.12
TCOF1-205ENST00000439160 SHROOM2Q13796 1616 aa14.32□□□□□ -0.12
TCOF1-205ENST00000439160 GNPATO15228 680 aa14.32□□□□□ -0.12
TCOF1-205ENST00000439160 ZSCAN22P10073 491 aaPredicted RBP14.32□□□□□ -0.12
TCOF1-205ENST00000439160 STX8Q9UNK0 236 aa14.32□□□□□ -0.12
TCOF1-205ENST00000439160 IGSF1Q8N6C5 1336 aa14.32□□□□□ -0.12
TCOF1-205ENST00000439160 RNF113AO15541 343 aaKnown RBP14.32□□□□□ -0.12
TCOF1-205ENST00000439160 CEP131Q9UPN4 1083 aa14.32□□□□□ -0.12
TCOF1-205ENST00000439160 ST5P78524 1137 aa14.31□□□□□ -0.12
TCOF1-205ENST00000439160 TNNI3KQ59H18 835 aa14.31□□□□□ -0.12
TCOF1-205ENST00000439160 FSIP1Q8NA03 581 aa14.31□□□□□ -0.12
TCOF1-205ENST00000439160 MIGA1Q8NAN2 632 aa14.31□□□□□ -0.12
TCOF1-205ENST00000439160 DACH1Q9UI36 760 aa14.31□□□□□ -0.12
TCOF1-205ENST00000439160 NSFL1CQ9UNZ2 370 aaKnown RBP14.31□□□□□ -0.12
TCOF1-205ENST00000439160 JAG2Q9Y219 1238 aa14.31□□□□□ -0.12
TCOF1-205ENST00000439160 FPGT-TNNI3KV9GXZ4 949 aa14.31□□□□□ -0.12
TCOF1-205ENST00000439160 ITGA6P23229 1130 aa14.31□□□□□ -0.12
TCOF1-205ENST00000439160 STIM1Q13586 685 aa14.31□□□□□ -0.12
TCOF1-205ENST00000439160 NAA16Q6N069 864 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-205ENST00000439160 SH3TC1Q8TE82 1336 aa14.31□□□□□ -0.12
TCOF1-205ENST00000439160 NPHP4O75161 1426 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-205ENST00000439160 DHX8Q14562 1220 aaKnown RBP14.31□□□□□ -0.12
TCOF1-205ENST00000439160 PANK2Q9BZ23 570 aa14.31□□□□□ -0.12
TCOF1-205ENST00000439160 NLRP5P59047 1200 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 PDE4BQ07343 736 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 CCDC96Q2M329 555 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 CCDC70Q6NSX1 233 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 SLF2Q8IX21 1173 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 KLHL40Q2TBA0 621 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 SPTY2D1Q68D10 685 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-205ENST00000439160 CCDC129Q6ZRS4 1044 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 CRNKL1Q9BZJ0 848 aaKnown RBP14.3□□□□□ -0.12
TCOF1-205ENST00000439160 VAT1LQ9HCJ6 419 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 CDC42BPBQ9Y5S2 1711 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 F8W031 263 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-205ENST00000439160 WTAPQ15007 396 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 CNPY2Q9Y2B0 182 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 CCDC171Q6TFL3 1326 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 A2ML1A8K2U0 1454 aa14.3□□□□□ -0.12
TCOF1-205ENST00000439160 RTL1A6NKG5 1358 aa14.29□□□□□ -0.12
TCOF1-205ENST00000439160 ZBTB43O43298 467 aa14.29□□□□□ -0.12
TCOF1-205ENST00000439160 KLHL10Q6JEL2 608 aa14.29□□□□□ -0.12
TCOF1-205ENST00000439160 FAM227BQ96M60 508 aa14.29□□□□□ -0.12
TCOF1-205ENST00000439160 USP25Q9UHP3 1055 aa14.29□□□□□ -0.12
TCOF1-205ENST00000439160 NEURL1BA8MQ27 555 aa14.29□□□□□ -0.12
TCOF1-205ENST00000439160 ZNF76P36508 570 aa14.29□□□□□ -0.12
TCOF1-205ENST00000439160 MAGEB6Q8N7X4 407 aa14.29□□□□□ -0.12
TCOF1-205ENST00000439160 BIN1O00499 593 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms