RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
TSC2-206ENST00000439117 MICALL1Q8N3F8 863 aa17.24■□□□□ 0.35
TSC2-206ENST00000439117 MAP3K19Q56UN5 1328 aa17.24■□□□□ 0.35
TSC2-206ENST00000439117 TUBBP07437 444 aa17.24■□□□□ 0.35
TSC2-206ENST00000439117 C8orf34Q49A92 452 aa17.24■□□□□ 0.35
TSC2-206ENST00000439117 TMOD2Q9NZR1 351 aa17.24■□□□□ 0.35
TSC2-206ENST00000439117 EHBP1Q8NDI1 1231 aa17.24■□□□□ 0.35
TSC2-206ENST00000439117 RPGRQ92834 1020 aaKnown RBP17.24■□□□□ 0.35
TSC2-206ENST00000439117 IL2RBP14784 551 aa17.23■□□□□ 0.35
TSC2-206ENST00000439117 XAGE3Q8WTP9 111 aa17.23■□□□□ 0.35
TSC2-206ENST00000439117 CDC5LQ99459 802 aaKnown RBP17.23■□□□□ 0.35
TSC2-206ENST00000439117 DNAI1Q9UI46 699 aa17.23■□□□□ 0.35
TSC2-206ENST00000439117 HMGB1P09429 215 aaKnown RBP17.23■□□□□ 0.35
TSC2-206ENST00000439117 RAB3GAP1Q15042 981 aa17.23■□□□□ 0.35
TSC2-206ENST00000439117 GIMAP6Q6P9H5 292 aa17.23■□□□□ 0.35
TSC2-206ENST00000439117 MCM6Q14566 821 aa17.23■□□□□ 0.35
TSC2-206ENST00000439117 IP6K1Q92551 441 aa17.23■□□□□ 0.35
TSC2-206ENST00000439117 COL17A1Q9UMD9 1497 aaPredicted RBP17.23■□□□□ 0.35
TSC2-206ENST00000439117 SMC5Q8IY18 1101 aa17.23■□□□□ 0.35
TSC2-206ENST00000439117 DDB1Q16531 1140 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 COPS6Q7L5N1 327 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 A0A1B0GUL7 405 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 IGHDP01880 384 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 CKAP4Q07065 602 aaKnown RBP17.22■□□□□ 0.35
TSC2-206ENST00000439117 NUP88Q99567 741 aaPredicted RBP17.22■□□□□ 0.35
TSC2-206ENST00000439117 NAPBQ9H115 298 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 CTAGE15A4D2H0 777 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 CTAGE8P0CG41 777 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 HOXC9P31274 260 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 CTAGE6Q86UF2 777 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 CTAGE4Q8IX94 777 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 C10orf67Q8IYJ2 551 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 C8orf76Q96K31 380 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 ALS2CR12Q96Q35 445 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 ZNF287Q9HBT7 754 aa17.22■□□□□ 0.35
TSC2-206ENST00000439117 HLTFQ14527 1009 aaKnown RBP eCLIP17.21■□□□□ 0.35
TSC2-206ENST00000439117 CEP112Q8N8E3 955 aa17.21■□□□□ 0.35
TSC2-206ENST00000439117 BCCIPQ9P287 314 aaKnown RBP eCLIP17.21■□□□□ 0.35
TSC2-206ENST00000439117 HSF2BPO75031 334 aa17.21■□□□□ 0.35
TSC2-206ENST00000439117 IGSF3O75054 1194 aa17.21■□□□□ 0.35
TSC2-206ENST00000439117 KLHL10Q6JEL2 608 aa17.21■□□□□ 0.35
TSC2-206ENST00000439117 DZIP1Q86YF9 867 aaKnown RBP17.21■□□□□ 0.35
TSC2-206ENST00000439117 ZFP91Q96JP5 570 aaPredicted RBP17.21■□□□□ 0.35
TSC2-206ENST00000439117 MEIS3Q99687 375 aa17.21■□□□□ 0.35
TSC2-206ENST00000439117 EVI5LQ96CN4 794 aa17.21■□□□□ 0.35
TSC2-206ENST00000439117 ALDH1L1O75891 902 aa17.21■□□□□ 0.35
TSC2-206ENST00000439117 ZSCAN22P10073 491 aaPredicted RBP17.21■□□□□ 0.35
TSC2-206ENST00000439117 USP5P45974 858 aa17.21■□□□□ 0.35
TSC2-206ENST00000439117 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
TSC2-206ENST00000439117 MAGI3Q5TCQ9 1506 aa17.2■□□□□ 0.34
TSC2-206ENST00000439117 GJB2P29033 226 aa17.2■□□□□ 0.34
TSC2-206ENST00000439117 CNNM3Q8NE01 707 aa17.2■□□□□ 0.34
TSC2-206ENST00000439117 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
TSC2-206ENST00000439117 ZSWIM4Q9H7M6 989 aa17.2■□□□□ 0.34
TSC2-206ENST00000439117 MINDY4BA8MYZ0 360 aa17.2■□□□□ 0.34
TSC2-206ENST00000439117 VPS36Q86VN1 386 aa17.2■□□□□ 0.34
TSC2-206ENST00000439117 OPA1O60313 960 aa17.2■□□□□ 0.34
TSC2-206ENST00000439117 CETN2P41208 172 aa17.2■□□□□ 0.34
TSC2-206ENST00000439117 KSR2Q6VAB6 950 aa17.2■□□□□ 0.34
TSC2-206ENST00000439117 TFIP11Q9UBB9 837 aaKnown RBP17.2■□□□□ 0.34
TSC2-206ENST00000439117 TMX3Q96JJ7 454 aa17.2■□□□□ 0.34
TSC2-206ENST00000439117 RFC4P35249 363 aa17.19■□□□□ 0.34
TSC2-206ENST00000439117 HDAC1Q13547 482 aaPredicted RBP17.19■□□□□ 0.34
TSC2-206ENST00000439117 PLCD3Q8N3E9 789 aa17.19■□□□□ 0.34
TSC2-206ENST00000439117 CPLX3Q8WVH0 158 aa17.19■□□□□ 0.34
TSC2-206ENST00000439117 C8orf37Q96NL8 207 aa17.19■□□□□ 0.34
TSC2-206ENST00000439117 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
TSC2-206ENST00000439117 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.19■□□□□ 0.34
TSC2-206ENST00000439117 CACNA2D4Q7Z3S7 1137 aa17.19■□□□□ 0.34
TSC2-206ENST00000439117 GOLGA1Q92805 767 aa17.19■□□□□ 0.34
TSC2-206ENST00000439117 PHAXQ9H814 394 aaKnown RBP17.19■□□□□ 0.34
TSC2-206ENST00000439117 MAP3K5Q99683 1374 aa17.19■□□□□ 0.34
TSC2-206ENST00000439117 DDX46Q7L014 1031 aaKnown RBP17.19■□□□□ 0.34
TSC2-206ENST00000439117 MAATS1Q7Z4T9 603 aa17.19■□□□□ 0.34
TSC2-206ENST00000439117 OTUD6BQ8N6M0 293 aa17.19■□□□□ 0.34
TSC2-206ENST00000439117 NFATC2IPQ8NCF5 419 aa17.19■□□□□ 0.34
TSC2-206ENST00000439117 JARID2Q92833 1246 aaPredicted RBP17.19■□□□□ 0.34
TSC2-206ENST00000439117 ACSBG1Q96GR2 724 aa17.19■□□□□ 0.34
TSC2-206ENST00000439117 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.19■□□□□ 0.34
TSC2-206ENST00000439117 POLR3DP05423 398 aaPredicted RBP17.18■□□□□ 0.34
TSC2-206ENST00000439117 GBP6Q6ZN66 633 aa17.18■□□□□ 0.34
TSC2-206ENST00000439117 NPC1L1Q9UHC9 1359 aa17.18■□□□□ 0.34
TSC2-206ENST00000439117 DCAF5Q96JK2 942 aa17.18■□□□□ 0.34
TSC2-206ENST00000439117 TAOK3Q9H2K8 898 aa17.18■□□□□ 0.34
TSC2-206ENST00000439117 ZHX3Q9H4I2 956 aa17.18■□□□□ 0.34
TSC2-206ENST00000439117 ZSCAN16Q9H4T2 348 aaPredicted RBP17.18■□□□□ 0.34
TSC2-206ENST00000439117 TMEM2Q9UHN6 1383 aa17.18■□□□□ 0.34
TSC2-206ENST00000439117 EDC4Q6P2E9 1401 aaKnown RBP17.18■□□□□ 0.34
TSC2-206ENST00000439117 MYRIPQ8NFW9 859 aa17.18■□□□□ 0.34
TSC2-206ENST00000439117 RHPN1Q8TCX5 695 aa17.18■□□□□ 0.34
TSC2-206ENST00000439117 FGFR1OPO95684 399 aaKnown RBP17.17■□□□□ 0.34
TSC2-206ENST00000439117 ATP6V1AP38606 617 aa17.17■□□□□ 0.34
TSC2-206ENST00000439117 ERO1AQ96HE7 468 aa17.17■□□□□ 0.34
TSC2-206ENST00000439117 TMX1Q9H3N1 280 aa17.17■□□□□ 0.34
TSC2-206ENST00000439117 ANO6Q4KMQ2 910 aa17.17■□□□□ 0.34
TSC2-206ENST00000439117 MKNK2Q9HBH9 465 aa17.17■□□□□ 0.34
TSC2-206ENST00000439117 SEPT11Q9NVA2 429 aaKnown RBP17.17■□□□□ 0.34
TSC2-206ENST00000439117 ZFYVE16Q7Z3T8 1539 aa17.17■□□□□ 0.34
TSC2-206ENST00000439117 GRM8O00222 908 aa17.17■□□□□ 0.34
TSC2-206ENST00000439117 VAMP4O75379 141 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms