RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 ASTN2O75129 1339 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-208ENST00000439029 CDHR2Q9BYE9 1310 aa13.11□□□□□ -0.31
SMPD4-208ENST00000439029 CEMIPQ8WUJ3 1361 aa13.1□□□□□ -0.31
SMPD4-208ENST00000439029 KIAA2012Q0VF49 1180 aa13.1□□□□□ -0.31
SMPD4-208ENST00000439029 MCM10Q7L590 875 aa13.1□□□□□ -0.31
SMPD4-208ENST00000439029 MPNDQ8N594 471 aa13.1□□□□□ -0.31
SMPD4-208ENST00000439029 ABCC4O15439 1325 aa13.1□□□□□ -0.31
SMPD4-208ENST00000439029 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
SMPD4-208ENST00000439029 PSMD14O00487 310 aa13.09□□□□□ -0.31
SMPD4-208ENST00000439029 RGL2O15211 777 aa13.09□□□□□ -0.31
SMPD4-208ENST00000439029 MOB2Q70IA6 237 aa13.09□□□□□ -0.31
SMPD4-208ENST00000439029 RTFDC1Q9BY42 306 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-208ENST00000439029 VPS33BQ9H267 617 aa13.09□□□□□ -0.31
SMPD4-208ENST00000439029 MIS18AQ9NYP9 233 aa13.09□□□□□ -0.31
SMPD4-208ENST00000439029 RRP7AQ9Y3A4 280 aaKnown RBP13.09□□□□□ -0.31
SMPD4-208ENST00000439029 NTSR2O95665 410 aa13.08□□□□□ -0.32
SMPD4-208ENST00000439029 MYL6BP14649 208 aa13.08□□□□□ -0.32
SMPD4-208ENST00000439029 MKRN3Q13064 507 aaKnown RBP13.08□□□□□ -0.32
SMPD4-208ENST00000439029 DCTN1Q14203 1278 aa13.08□□□□□ -0.32
SMPD4-208ENST00000439029 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-208ENST00000439029 FBXO46Q6PJ61 603 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-208ENST00000439029 CDCA5Q96FF9 252 aa13.08□□□□□ -0.32
SMPD4-208ENST00000439029 NLRP3Q96P20 1036 aa13.08□□□□□ -0.32
SMPD4-208ENST00000439029 DBNDD1Q9H9R9 158 aa13.08□□□□□ -0.32
SMPD4-208ENST00000439029 KCNQ5Q9NR82 932 aa13.08□□□□□ -0.32
SMPD4-208ENST00000439029 NUP98P52948 1817 aa13.08□□□□□ -0.32
SMPD4-208ENST00000439029 MAP3K15Q6ZN16 1313 aa13.08□□□□□ -0.32
SMPD4-208ENST00000439029 GPR25O00155 361 aa13.07□□□□□ -0.32
SMPD4-208ENST00000439029 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
SMPD4-208ENST00000439029 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
SMPD4-208ENST00000439029 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
SMPD4-208ENST00000439029 KIF6Q6ZMV9 814 aa13.07□□□□□ -0.32
SMPD4-208ENST00000439029 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
SMPD4-208ENST00000439029 R3HDMLQ9H3Y0 253 aa13.07□□□□□ -0.32
SMPD4-208ENST00000439029 GGA3Q9NZ52 723 aa13.07□□□□□ -0.32
SMPD4-208ENST00000439029 SCAF8Q9UPN6 1271 aaKnown RBP13.07□□□□□ -0.32
SMPD4-208ENST00000439029 KIAA0100Q14667 2235 aaKnown RBP13.07□□□□□ -0.32
SMPD4-208ENST00000439029 TRIOBPQ9H2D6 2365 aa13.06□□□□□ -0.32
SMPD4-208ENST00000439029 ERVV-1B6SEH8 477 aa13.06□□□□□ -0.32
SMPD4-208ENST00000439029 DLL1O00548 723 aa13.06□□□□□ -0.32
SMPD4-208ENST00000439029 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
SMPD4-208ENST00000439029 SP8Q8IXZ3 490 aa13.06□□□□□ -0.32
SMPD4-208ENST00000439029 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
SMPD4-208ENST00000439029 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-208ENST00000439029 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
SMPD4-208ENST00000439029 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
SMPD4-208ENST00000439029 ZNF34Q8IZ26 560 aa13.05□□□□□ -0.32
SMPD4-208ENST00000439029 DPF2Q92785 391 aa13.05□□□□□ -0.32
SMPD4-208ENST00000439029 UBE2Q2LH0YL09 131 aa13.04□□□□□ -0.32
SMPD4-208ENST00000439029 BBOX1O75936 387 aa13.04□□□□□ -0.32
SMPD4-208ENST00000439029 HCLS1P14317 486 aaPredicted RBP13.04□□□□□ -0.32
SMPD4-208ENST00000439029 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
SMPD4-208ENST00000439029 RTF1Q92541 710 aaKnown RBP13.04□□□□□ -0.32
SMPD4-208ENST00000439029 IBTKQ9P2D0 1353 aaPredicted RBP13.04□□□□□ -0.32
SMPD4-208ENST00000439029 FKTNO75072 461 aa13.03□□□□□ -0.32
SMPD4-208ENST00000439029 ANGEL2Q5VTE6 544 aaKnown RBP13.03□□□□□ -0.32
SMPD4-208ENST00000439029 PRAMEF18Q5VWM3 479 aa13.03□□□□□ -0.32
SMPD4-208ENST00000439029 PPP1R42Q7Z4L9 355 aa13.03□□□□□ -0.32
SMPD4-208ENST00000439029 UTP14AQ9BVJ6 771 aaKnown RBP13.03□□□□□ -0.32
SMPD4-208ENST00000439029 TAF1P21675 1872 aa13.03□□□□□ -0.32
SMPD4-208ENST00000439029 RTL9Q8NET4 1388 aa13.03□□□□□ -0.32
SMPD4-208ENST00000439029 EN2P19622 333 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-208ENST00000439029 TRIM17Q9Y577 477 aa13.02□□□□□ -0.33
SMPD4-208ENST00000439029 COL3A1P02461 1466 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-208ENST00000439029 CEP290O15078 2479 aa13.01□□□□□ -0.33
SMPD4-208ENST00000439029 ECE2O60344 883 aa13.01□□□□□ -0.33
SMPD4-208ENST00000439029 EIF4G2P78344 907 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMPD4-208ENST00000439029 SCARF1Q14162 830 aa13.01□□□□□ -0.33
SMPD4-208ENST00000439029 TTLL12Q14166 644 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-208ENST00000439029 WASHC4Q2M389 1173 aa13.01□□□□□ -0.33
SMPD4-208ENST00000439029 SLC10A5Q5PT55 438 aa13.01□□□□□ -0.33
SMPD4-208ENST00000439029 DDX46Q7L014 1031 aaKnown RBP13.01□□□□□ -0.33
SMPD4-208ENST00000439029 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
SMPD4-208ENST00000439029 RSPH6AQ9H0K4 717 aa13.01□□□□□ -0.33
SMPD4-208ENST00000439029 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-208ENST00000439029 NSFL1CQ9UNZ2 370 aaKnown RBP13.01□□□□□ -0.33
SMPD4-208ENST00000439029 DUOX1Q9NRD9 1551 aa13.01□□□□□ -0.33
SMPD4-208ENST00000439029 MKI67P46013 3256 aaKnown RBP13□□□□□ -0.33
SMPD4-208ENST00000439029 C6orf229H3BNL8 230 aa13□□□□□ -0.33
SMPD4-208ENST00000439029 GRAPQ13588 217 aa13□□□□□ -0.33
SMPD4-208ENST00000439029 GIGYF2Q6Y7W6 1299 aaKnown RBP13□□□□□ -0.33
SMPD4-208ENST00000439029 GRAPLQ8TC17 118 aaPredicted RBP13□□□□□ -0.33
SMPD4-208ENST00000439029 RPS12P25398 132 aaKnown RBP12.99□□□□□ -0.33
SMPD4-208ENST00000439029 TM4SF4P48230 202 aa12.99□□□□□ -0.33
SMPD4-208ENST00000439029 TAF7Q15545 349 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-208ENST00000439029 PARP10Q53GL7 1025 aa12.99□□□□□ -0.33
SMPD4-208ENST00000439029 SLC17A8Q8NDX2 589 aa12.99□□□□□ -0.33
SMPD4-208ENST00000439029 POLLQ9UGP5 575 aa12.99□□□□□ -0.33
SMPD4-208ENST00000439029 PAPPA2Q9BXP8 1791 aa12.99□□□□□ -0.33
SMPD4-208ENST00000439029 FKBP1BP68106 108 aa12.98□□□□□ -0.33
SMPD4-208ENST00000439029 GPSM2P81274 684 aa12.98□□□□□ -0.33
SMPD4-208ENST00000439029 LAMB4A4D0S4 1761 aa12.98□□□□□ -0.33
SMPD4-208ENST00000439029 LAMB2P55268 1798 aa12.98□□□□□ -0.33
SMPD4-208ENST00000439029 ANXA1P04083 346 aa12.97□□□□□ -0.33
SMPD4-208ENST00000439029 PRKG1Q13976 671 aa12.97□□□□□ -0.33
SMPD4-208ENST00000439029 OTOP1Q7RTM1 612 aa12.97□□□□□ -0.33
SMPD4-208ENST00000439029 CELF1Q92879 486 aaKnown RBP12.97□□□□□ -0.33
SMPD4-208ENST00000439029 SCN9AQ15858 1988 aa12.96□□□□□ -0.33
SMPD4-208ENST00000439029 H0YGN5 161 aa12.96□□□□□ -0.33
SMPD4-208ENST00000439029 NOM1Q5C9Z4 860 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms