RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 NOVA2Q9UNW9 492 aaKnown RBP6.32□□□□□ -1.4
HMGB1P18-201ENST00000438801 SASH3O75995 380 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 RARAP10276 462 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 CPB1P15086 417 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 SELPP16109 830 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 FKBP5Q13451 457 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 NKAPLQ5M9Q1 402 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 TRPM4Q8TD43 1214 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 IFT43Q96FT9 208 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 RTCBQ9Y3I0 505 aaKnown RBP6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 ZBTB42B2RXF5 422 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 OPLAHO14841 1288 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 ADGRE1Q14246 886 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 SWI5Q1ZZU3 235 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 PERM1Q5SV97 790 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 DMRTC2Q8IXT2 367 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 FMR1NBQ8N0W7 255 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 PRIMPOLQ96LW4 560 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 LPIN3Q9BQK8 851 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 FRRS1LQ9P0K9 344 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 ACIN1Q9UKV3 1341 aaKnown RBP6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 PRMT3O60678 531 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 MLLT1Q03111 559 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 MBTPS1Q14703 1052 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 COX20Q5RI15 118 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 MSL1Q68DK7 614 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 ELMSAN1Q6PJG2 1045 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 SHISA2Q6UWI4 295 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 TREML1Q86YW5 311 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 LENG1Q96BZ8 264 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 USP20Q9Y2K6 914 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 DYRK3O43781 588 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 EGFRP00533 1210 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 ARID4AP29374 1257 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 GPLD1P80108 840 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 NRG1Q02297 640 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 ELOAQ14241 798 aaKnown RBP6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 GRIK5Q16478 980 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 TXNRD3Q86VQ6 643 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 RGL4Q8IZJ4 473 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 ZMIZ1Q9ULJ6 1067 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 XYLBO75191 536 aa6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 NRLP54845 237 aa6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 OCLNQ16625 522 aa6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 ZMYM1Q5SVZ6 1142 aa6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 CMTR1Q8N1G2 835 aaKnown RBP6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 TTC9Q92623 222 aa6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 TLR7Q9NYK1 1049 aaKnown RBP6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 PLAURQ03405 335 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 FAM69CQ0P6D2 419 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 HFE2Q6ZVN8 426 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 WFDC8Q8IUA0 241 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 DTWD1Q8N5C7 304 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 STK32AQ8WU08 396 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 SAP130Q9H0E3 1048 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 SMG9Q9H0W8 520 aaKnown RBP6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 USP21Q9UK80 565 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 CUX2O14529 1486 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 EIF2AK2P19525 551 aaKnown RBP6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 BRD2P25440 801 aaKnown RBP6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 SRPK2P78362 688 aaKnown RBP6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 C16orf46Q6P387 395 aa6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 FBXO11Q86XK2 927 aa6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 ETFBKMTQ8IXQ9 262 aa6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 KCNMB2Q9Y691 235 aa6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 J3QW42 95 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 MMP20O60882 483 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 PSAPP07602 524 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 H2AFB1P0C5Y9 115 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 H2AFB2P0C5Z0 115 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 PRSS36Q5K4E3 855 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 COL26A1Q96A83 441 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 LOC102724428A0A0B4J2F2 783 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 ATG7O95352 703 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 SOX18P35713 384 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 SIK1P57059 783 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 TP53INP1Q96A56 240 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 PLD4Q96BZ4 506 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 MKNK1Q9BUB5 465 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 CXXC1Q9P0U4 656 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 GHRHP01286 108 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 HOXD8P13378 290 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 TRIP4Q15650 581 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 FOXD4L6Q3SYB3 417 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 FAM26DQ5JW98 314 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 TMEM164Q5U3C3 297 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 IGF2-ASQ6U949 168 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 FOXD4L3Q6VB84 417 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 CAPN12Q6ZSI9 719 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 NLRP13Q86W25 1043 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 WFDC12Q8WWY7 111 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 NSUN5Q96P11 429 aaKnown RBP6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 SSBP4Q9BWG4 385 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 RBSNQ9H1K0 784 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 SCO2A0A1W2PP80 73 aa6.21□□□□□ -1.42
HMGB1P18-201ENST00000438801 TNFRSF10BO14763 440 aa6.21□□□□□ -1.42
HMGB1P18-201ENST00000438801 PTCD1O75127 700 aaKnown RBP6.21□□□□□ -1.42
HMGB1P18-201ENST00000438801 DEAF1O75398 565 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P18-201ENST00000438801 IREB2P48200 963 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms