RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 NOVA2Q9UNW9 492 aaKnown RBP6.32□□□□□ -1.4
HMGB1P18-201ENST00000438801 SASH3O75995 380 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 RARAP10276 462 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 CPB1P15086 417 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 SELPP16109 830 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 FKBP5Q13451 457 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 NKAPLQ5M9Q1 402 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 TRPM4Q8TD43 1214 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 IFT43Q96FT9 208 aa6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 RTCBQ9Y3I0 505 aaKnown RBP6.31□□□□□ -1.4
HMGB1P18-201ENST00000438801 ZBTB42B2RXF5 422 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 OPLAHO14841 1288 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 ADGRE1Q14246 886 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 SWI5Q1ZZU3 235 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 PERM1Q5SV97 790 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 DMRTC2Q8IXT2 367 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 FMR1NBQ8N0W7 255 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 PRIMPOLQ96LW4 560 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 LPIN3Q9BQK8 851 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 FRRS1LQ9P0K9 344 aa6.3□□□□□ -1.4
HMGB1P18-201ENST00000438801 ACIN1Q9UKV3 1341 aaKnown RBP6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 PRMT3O60678 531 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 MLLT1Q03111 559 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 MBTPS1Q14703 1052 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 COX20Q5RI15 118 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 MSL1Q68DK7 614 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 ELMSAN1Q6PJG2 1045 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 SHISA2Q6UWI4 295 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 TREML1Q86YW5 311 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 LENG1Q96BZ8 264 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 USP20Q9Y2K6 914 aa6.29□□□□□ -1.4
HMGB1P18-201ENST00000438801 DYRK3O43781 588 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 EGFRP00533 1210 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 ARID4AP29374 1257 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 GPLD1P80108 840 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 NRG1Q02297 640 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 ELOAQ14241 798 aaKnown RBP6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 GRIK5Q16478 980 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 TXNRD3Q86VQ6 643 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 RGL4Q8IZJ4 473 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 ZMIZ1Q9ULJ6 1067 aa6.28□□□□□ -1.4
HMGB1P18-201ENST00000438801 XYLBO75191 536 aa6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 NRLP54845 237 aa6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 OCLNQ16625 522 aa6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 ZMYM1Q5SVZ6 1142 aa6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 CMTR1Q8N1G2 835 aaKnown RBP6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 TTC9Q92623 222 aa6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 TLR7Q9NYK1 1049 aaKnown RBP6.27□□□□□ -1.41
HMGB1P18-201ENST00000438801 PLAURQ03405 335 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 FAM69CQ0P6D2 419 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 HFE2Q6ZVN8 426 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 WFDC8Q8IUA0 241 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 DTWD1Q8N5C7 304 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 STK32AQ8WU08 396 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 SAP130Q9H0E3 1048 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 SMG9Q9H0W8 520 aaKnown RBP6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 USP21Q9UK80 565 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 CUX2O14529 1486 aa6.26□□□□□ -1.41
HMGB1P18-201ENST00000438801 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 EIF2AK2P19525 551 aaKnown RBP6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 BRD2P25440 801 aaKnown RBP6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 SRPK2P78362 688 aaKnown RBP6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 C16orf46Q6P387 395 aa6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 FBXO11Q86XK2 927 aa6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 ETFBKMTQ8IXQ9 262 aa6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 KCNMB2Q9Y691 235 aa6.25□□□□□ -1.41
HMGB1P18-201ENST00000438801 J3QW42 95 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 MMP20O60882 483 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 PSAPP07602 524 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 H2AFB1P0C5Y9 115 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 H2AFB2P0C5Z0 115 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 PRSS36Q5K4E3 855 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 COL26A1Q96A83 441 aa6.24□□□□□ -1.41
HMGB1P18-201ENST00000438801 LOC102724428A0A0B4J2F2 783 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 ATG7O95352 703 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 SOX18P35713 384 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 SIK1P57059 783 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 TP53INP1Q96A56 240 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 PLD4Q96BZ4 506 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 MKNK1Q9BUB5 465 aa6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 CXXC1Q9P0U4 656 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P18-201ENST00000438801 GHRHP01286 108 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 HOXD8P13378 290 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 TRIP4Q15650 581 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 FOXD4L6Q3SYB3 417 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 FAM26DQ5JW98 314 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 TMEM164Q5U3C3 297 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 IGF2-ASQ6U949 168 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 FOXD4L3Q6VB84 417 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 CAPN12Q6ZSI9 719 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 NLRP13Q86W25 1043 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 WFDC12Q8WWY7 111 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 NSUN5Q96P11 429 aaKnown RBP6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 SSBP4Q9BWG4 385 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 RBSNQ9H1K0 784 aa6.22□□□□□ -1.41
HMGB1P18-201ENST00000438801 SCO2A0A1W2PP80 73 aa6.21□□□□□ -1.42
HMGB1P18-201ENST00000438801 TNFRSF10BO14763 440 aa6.21□□□□□ -1.42
HMGB1P18-201ENST00000438801 PTCD1O75127 700 aaKnown RBP6.21□□□□□ -1.42
HMGB1P18-201ENST00000438801 DEAF1O75398 565 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P18-201ENST00000438801 IREB2P48200 963 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms