RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 PNMA8AQ86V59 439 aaPredicted RBP11.38□□□□□ -0.59
R3HDM1-208ENST00000438014 DNAJC10Q8IXB1 793 aa11.38□□□□□ -0.59
R3HDM1-208ENST00000438014 ZNF710Q8N1W2 664 aa11.38□□□□□ -0.59
R3HDM1-208ENST00000438014 PROCA1Q8NCQ7 364 aaPredicted RBP11.38□□□□□ -0.59
R3HDM1-208ENST00000438014 CNKSR1Q969H4 720 aa11.38□□□□□ -0.59
R3HDM1-208ENST00000438014 POLKQ9UBT6 870 aa11.38□□□□□ -0.59
R3HDM1-208ENST00000438014 HACL1Q9UJ83 578 aa11.38□□□□□ -0.59
R3HDM1-208ENST00000438014 ABT1Q9ULW3 272 aaKnown RBP11.38□□□□□ -0.59
R3HDM1-208ENST00000438014 COL5A3P25940 1745 aaPredicted RBP11.38□□□□□ -0.59
R3HDM1-208ENST00000438014 A6NJR5 290 aa11.37□□□□□ -0.59
R3HDM1-208ENST00000438014 MCM6Q14566 821 aa11.37□□□□□ -0.59
R3HDM1-208ENST00000438014 PPP4R3BQ5MIZ7 849 aa11.37□□□□□ -0.59
R3HDM1-208ENST00000438014 MYSM1Q5VVJ2 828 aa11.37□□□□□ -0.59
R3HDM1-208ENST00000438014 CNTROBQ8N137 903 aa11.37□□□□□ -0.59
R3HDM1-208ENST00000438014 CARD14Q9BXL6 1004 aa11.37□□□□□ -0.59
R3HDM1-208ENST00000438014 A0A087WZG4 1122 aa11.36□□□□□ -0.59
R3HDM1-208ENST00000438014 CYP19A1P11511 503 aaPredicted RBP11.36□□□□□ -0.59
R3HDM1-208ENST00000438014 DIXDC1Q155Q3 683 aa11.36□□□□□ -0.59
R3HDM1-208ENST00000438014 BICDL1Q6ZP65 573 aa11.36□□□□□ -0.59
R3HDM1-208ENST00000438014 C1orf115Q9H7X2 142 aa11.36□□□□□ -0.59
R3HDM1-208ENST00000438014 BCL2L12Q9HB09 334 aa11.36□□□□□ -0.59
R3HDM1-208ENST00000438014 LHX6Q9UPM6 363 aa11.36□□□□□ -0.59
R3HDM1-208ENST00000438014 APBB1O00213 710 aa11.35□□□□□ -0.59
R3HDM1-208ENST00000438014 EPHX2P34913 555 aa11.35□□□□□ -0.59
R3HDM1-208ENST00000438014 CLUAP1Q96AJ1 413 aa11.35□□□□□ -0.59
R3HDM1-208ENST00000438014 ARID3AQ99856 593 aa11.35□□□□□ -0.59
R3HDM1-208ENST00000438014 COL15A1P39059 1388 aa11.35□□□□□ -0.59
R3HDM1-208ENST00000438014 TIAM2Q8IVF5 1701 aa11.35□□□□□ -0.59
R3HDM1-208ENST00000438014 CLK2P49760 499 aaKnown RBP11.34□□□□□ -0.59
R3HDM1-208ENST00000438014 STYK1Q6J9G0 422 aa11.34□□□□□ -0.59
R3HDM1-208ENST00000438014 CAPNS2Q96L46 248 aa11.34□□□□□ -0.59
R3HDM1-208ENST00000438014 GPR101Q96P66 508 aaPredicted RBP11.34□□□□□ -0.59
R3HDM1-208ENST00000438014 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.34□□□□□ -0.59
R3HDM1-208ENST00000438014 TBC1D2Q9BYX2 928 aa11.34□□□□□ -0.59
R3HDM1-208ENST00000438014 NPHP1O15259 732 aa11.33□□□□□ -0.6
R3HDM1-208ENST00000438014 CA12O43570 354 aa11.33□□□□□ -0.6
R3HDM1-208ENST00000438014 MAP1SQ66K74 1059 aaPredicted RBP11.33□□□□□ -0.6
R3HDM1-208ENST00000438014 MASTLQ96GX5 879 aa11.33□□□□□ -0.6
R3HDM1-208ENST00000438014 MCOLN1Q9GZU1 580 aa11.33□□□□□ -0.6
R3HDM1-208ENST00000438014 SCUBE2Q9NQ36 999 aa11.33□□□□□ -0.6
R3HDM1-208ENST00000438014 DDX21Q9NR30 783 aaKnown RBP eCLIP11.33□□□□□ -0.6
R3HDM1-208ENST00000438014 ZBTB1Q9Y2K1 713 aa11.33□□□□□ -0.6
R3HDM1-208ENST00000438014 CCDC88AQ3V6T2 1871 aa11.33□□□□□ -0.6
R3HDM1-208ENST00000438014 CARMIL3Q8ND23 1372 aa11.32□□□□□ -0.6
R3HDM1-208ENST00000438014 RCCD1A6NED2 376 aa11.32□□□□□ -0.6
R3HDM1-208ENST00000438014 COL9A1P20849 921 aa11.32□□□□□ -0.6
R3HDM1-208ENST00000438014 CANXP27824 592 aaKnown RBP11.32□□□□□ -0.6
R3HDM1-208ENST00000438014 MAP2K2P36507 400 aa11.32□□□□□ -0.6
R3HDM1-208ENST00000438014 PRR5LQ6MZQ0 368 aa11.32□□□□□ -0.6
R3HDM1-208ENST00000438014 PRPF40BQ6NWY9 871 aaKnown RBP11.32□□□□□ -0.6
R3HDM1-208ENST00000438014 SLC52A2Q9HAB3 445 aa11.32□□□□□ -0.6
R3HDM1-208ENST00000438014 FAM198AQ9UFP1 575 aa11.32□□□□□ -0.6
R3HDM1-208ENST00000438014 VIRMAQ69YN4 1812 aaKnown RBP11.31□□□□□ -0.6
R3HDM1-208ENST00000438014 STARD3NLO95772 234 aa11.31□□□□□ -0.6
R3HDM1-208ENST00000438014 SRGNP10124 158 aa11.31□□□□□ -0.6
R3HDM1-208ENST00000438014 ST5P78524 1137 aa11.31□□□□□ -0.6
R3HDM1-208ENST00000438014 CCDC93Q567U6 631 aa11.31□□□□□ -0.6
R3HDM1-208ENST00000438014 TBC1D9BQ66K14 1250 aa11.31□□□□□ -0.6
R3HDM1-208ENST00000438014 NRXN2Q9P2S2 1712 aa11.31□□□□□ -0.6
R3HDM1-208ENST00000438014 PPP1R3GB7ZBB8 358 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 TRAK2O60296 914 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 PTPREP23469 700 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 TNNT2P45379 298 aaPredicted RBP11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 EIF5P55010 431 aaKnown RBP11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 FKBP4Q02790 459 aaKnown RBP eCLIP11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 GRM1Q13255 1194 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 AKAP4Q5JQC9 854 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 MAMSTRQ6ZN01 415 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 NPM2Q86SE8 214 aaKnown RBP11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 RTKN2Q8IZC4 609 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 SETDB2Q96T68 719 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 DICER1Q9UPY3 1922 aaKnown RBP11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 DLEC1Q9Y238 1755 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 SCN4AP35499 1836 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 AFDNP55196 1824 aaKnown RBP11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 KIF20BQ96Q89 1820 aa11.3□□□□□ -0.6
R3HDM1-208ENST00000438014 SLC39A6Q13433 755 aa11.29□□□□□ -0.6
R3HDM1-208ENST00000438014 DGKZQ13574 1117 aa11.29□□□□□ -0.6
R3HDM1-208ENST00000438014 SULF1Q8IWU6 871 aa11.29□□□□□ -0.6
R3HDM1-208ENST00000438014 GPC2Q8N158 579 aa11.29□□□□□ -0.6
R3HDM1-208ENST00000438014 C7orf43Q8WVR3 580 aa11.29□□□□□ -0.6
R3HDM1-208ENST00000438014 TSKSQ9UJT2 592 aa11.29□□□□□ -0.6
R3HDM1-208ENST00000438014 ADAMTS7Q9UKP4 1686 aa11.29□□□□□ -0.6
R3HDM1-208ENST00000438014 ZNF541Q9H0D2 1346 aa11.29□□□□□ -0.6
R3HDM1-208ENST00000438014 POTEB2H3BUK9 544 aa11.28□□□□□ -0.6
R3HDM1-208ENST00000438014 FZD9O00144 591 aa11.28□□□□□ -0.6
R3HDM1-208ENST00000438014 LMOD1P29536 600 aaPredicted RBP11.28□□□□□ -0.6
R3HDM1-208ENST00000438014 SULT6B1Q6IMI4 303 aa11.28□□□□□ -0.6
R3HDM1-208ENST00000438014 NUDT18Q6ZVK8 323 aa11.28□□□□□ -0.6
R3HDM1-208ENST00000438014 TEX13AQ9BXU3 409 aaPredicted RBP11.28□□□□□ -0.6
R3HDM1-208ENST00000438014 ZNF277Q9NRM2 450 aaPredicted RBP11.28□□□□□ -0.6
R3HDM1-208ENST00000438014 RNF123Q5XPI4 1314 aa11.28□□□□□ -0.6
R3HDM1-208ENST00000438014 FER1L6Q2WGJ9 1857 aa11.27□□□□□ -0.6
R3HDM1-208ENST00000438014 TJP1Q07157 1748 aa11.27□□□□□ -0.61
R3HDM1-208ENST00000438014 NBPF26B4DH59 902 aa11.27□□□□□ -0.61
R3HDM1-208ENST00000438014 RNMTO43148 476 aaKnown RBP11.27□□□□□ -0.61
R3HDM1-208ENST00000438014 RAD21O60216 631 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms