RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 SLFNL1Q499Z3 407 aa13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 C8orf76Q96K31 380 aa13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 IQSEC3Q9UPP2 1182 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 OFD1O75665 1012 aa13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 ZNF165P49910 485 aa13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 TYRO3Q06418 890 aa13.66□□□□□ -0.22
PDLIM5-206ENST00000437932 MARCKSP29966 332 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 INTS4Q96HW7 963 aaKnown RBP13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 TPCN1Q9ULQ1 816 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 A0A087WWV3 80 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 TNNT1P13805 278 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 TDO2P48775 406 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 MCMDC2Q4G0Z9 681 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 KIF24Q5T7B8 1368 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 PNPLA6Q8IY17 1366 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 CLTCQ00610 1675 aaKnown RBP13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 AIDAQ96BJ3 306 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 KIAA1210Q9ULL0 1709 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 MICU3Q86XE3 530 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 PDCL2Q8N4E4 241 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 MNS1Q8NEH6 495 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 LSG1Q9H089 658 aaKnown RBP13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 PAG1Q9NWQ8 432 aa13.65□□□□□ -0.22
PDLIM5-206ENST00000437932 NOL7Q9UMY1 257 aaKnown RBP13.65□□□□□ -0.23
PDLIM5-206ENST00000437932 NRXN1Q9ULB1 1477 aa13.65□□□□□ -0.23
PDLIM5-206ENST00000437932 PPLO60437 1756 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 ALDH1L1O75891 902 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 ABCF2Q9UG63 623 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 ZHX1Q9UKY1 873 aaPredicted RBP13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 SETD1BQ9UPS6 1966 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 MINDY4BA8MYZ0 360 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 DHX16O60231 1041 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 RPS6KB1P23443 525 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 PDE4CQ08493 712 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 ZNF790Q6PG37 636 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 HELBQ8NG08 1087 aaPredicted RBP13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 LINS1Q8NG48 757 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 NLRP1Q9C000 1473 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 CEP57L1Q8IYX8 460 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 SHPRHQ149N8 1683 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 ZNF213O14771 459 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 HMGN5P82970 282 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 EAF2Q96CJ1 260 aaPredicted RBP13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 USP16Q9Y5T5 823 aa13.64□□□□□ -0.23
PDLIM5-206ENST00000437932 IFIT5Q13325 482 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 SSH3Q8TE77 659 aa13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 IGSF3O75054 1194 aa13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 MPHOSPH8Q99549 860 aa13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 TRMT112Q9UI30 125 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 ZDHHC9Q9Y397 364 aa13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 ARHGEF40Q8TER5 1519 aa13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 TNNI3KQ59H18 835 aa13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 TMC6Q7Z403 805 aa13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 FPGT-TNNI3KV9GXZ4 949 aa13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 KLF18A0A0U1RQI7 1052 aa13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 ZMYND15Q9H091 742 aa13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 IL25Q9H293 177 aa13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 LMTK2Q8IWU2 1503 aa13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 ZNF589Q86UQ0 364 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-206ENST00000437932 AOPEPQ8N6M6 819 aa13.62□□□□□ -0.23
PDLIM5-206ENST00000437932 DIP2CQ9Y2E4 1556 aa13.62□□□□□ -0.23
PDLIM5-206ENST00000437932 RAI14Q9P0K7 980 aa13.62□□□□□ -0.23
PDLIM5-206ENST00000437932 MED14O60244 1454 aa13.62□□□□□ -0.23
PDLIM5-206ENST00000437932 IGSF1Q8N6C5 1336 aa13.62□□□□□ -0.23
PDLIM5-206ENST00000437932 PTPDC1A2A3K4 754 aa13.62□□□□□ -0.23
PDLIM5-206ENST00000437932 UBE2Q2Q8WVN8 375 aa13.62□□□□□ -0.23
PDLIM5-206ENST00000437932 DEPDC5O75140 1603 aa13.62□□□□□ -0.23
PDLIM5-206ENST00000437932 CLSTN1O94985 981 aa13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 A1BGP04217 495 aa13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 LIG1P18858 919 aa13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 KLHL10Q6JEL2 608 aa13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 LRP2BPQ9P2M1 347 aa13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 ERICH4A6NGS2 130 aa13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 CFAP100Q494V2 611 aa13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 PDCL3Q9H2J4 239 aa13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 ORC3Q9UBD5 711 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 TBX22Q9Y458 520 aa13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 GIGYF1O75420 1035 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 ZNF496Q96IT1 587 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 ARHGEF28Q8N1W1 1705 aaKnown RBP13.61□□□□□ -0.23
PDLIM5-206ENST00000437932 A0A1B0GVL5 298 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 DDX19AQ9NUU7 478 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 MROH1Q8NDA8 1641 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 MARCH6O60337 910 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 LDHAL6AQ6ZMR3 332 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 SKIDA1Q1XH10 827 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 FAM89AQ96GI7 184 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 ZKSCAN3Q9BRR0 538 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 CTNNA3Q9UI47 895 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 HOOK1Q9UJC3 728 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 STX1AQ16623 288 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 PI4K2BQ8TCG2 481 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 HMG20BQ9P0W2 317 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 AK9Q5TCS8 1911 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 CD163L1Q9NR16 1453 aa13.6□□□□□ -0.23
PDLIM5-206ENST00000437932 FAM200AQ8TCP9 573 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 MAP7D2Q96T17 732 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 FRMPD1Q5SYB0 1578 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 CPLX3Q8WVH0 158 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 258.5 ms