RNA–Protein interactions for RNA: ENST00000437437.6

NR1I3-210, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-210ENST00000437437 MASTLQ96GX5 879 aa16.4■□□□□ 0.22
NR1I3-210ENST00000437437 H0YIN7 160 aa16.39■□□□□ 0.21
NR1I3-210ENST00000437437 UBTFL1P0CB47 393 aaPredicted RBP16.39■□□□□ 0.21
NR1I3-210ENST00000437437 DPEP1P16444 411 aa16.39■□□□□ 0.21
NR1I3-210ENST00000437437 RTL5Q5HYW3 569 aaPredicted RBP16.39■□□□□ 0.21
NR1I3-210ENST00000437437 C2CD5Q86YS7 1000 aa16.39■□□□□ 0.21
NR1I3-210ENST00000437437 ITPRIPQ8IWB1 547 aa16.39■□□□□ 0.21
NR1I3-210ENST00000437437 TTLL11Q8NHH1 800 aa16.39■□□□□ 0.21
NR1I3-210ENST00000437437 SUCLG2Q96I99 432 aa16.39■□□□□ 0.21
NR1I3-210ENST00000437437 CRAMP1Q96RY5 1269 aa16.39■□□□□ 0.21
NR1I3-210ENST00000437437 CACNA1SQ13698 1873 aa16.38■□□□□ 0.21
NR1I3-210ENST00000437437 COL4A1P02462 1669 aa16.38■□□□□ 0.21
NR1I3-210ENST00000437437 ANKRD44Q8N8A2 993 aa16.38■□□□□ 0.21
NR1I3-210ENST00000437437 JARID2Q92833 1246 aaPredicted RBP16.38■□□□□ 0.21
NR1I3-210ENST00000437437 CHMP4BQ9H444 224 aaKnown RBP16.38■□□□□ 0.21
NR1I3-210ENST00000437437 CENPBP07199 599 aaPredicted RBP16.37■□□□□ 0.21
NR1I3-210ENST00000437437 CHRNA5P30532 468 aa16.37■□□□□ 0.21
NR1I3-210ENST00000437437 MTX1Q13505 466 aa16.37■□□□□ 0.21
NR1I3-210ENST00000437437 CCDC152Q4G0S7 254 aa16.37■□□□□ 0.21
NR1I3-210ENST00000437437 EPHA10Q5JZY3 1008 aa16.37■□□□□ 0.21
NR1I3-210ENST00000437437 COG6Q9Y2V7 657 aa16.37■□□□□ 0.21
NR1I3-210ENST00000437437 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
NR1I3-210ENST00000437437 SLX4Q8IY92 1834 aa16.37■□□□□ 0.21
NR1I3-210ENST00000437437 TAF1P21675 1872 aa16.37■□□□□ 0.21
NR1I3-210ENST00000437437 A0A0G2JLW4 131 aa16.36■□□□□ 0.21
NR1I3-210ENST00000437437 CNKSR1Q969H4 720 aa16.36■□□□□ 0.21
NR1I3-210ENST00000437437 ZBTB40Q9NUA8 1239 aa16.36■□□□□ 0.21
NR1I3-210ENST00000437437 SNED1Q8TER0 1413 aa16.36■□□□□ 0.21
NR1I3-210ENST00000437437 GNAI2P04899 355 aa16.35■□□□□ 0.21
NR1I3-210ENST00000437437 ALDH1B1P30837 517 aa16.35■□□□□ 0.21
NR1I3-210ENST00000437437 RPGRQ92834 1020 aaKnown RBP16.35■□□□□ 0.21
NR1I3-210ENST00000437437 RBM17Q96I25 401 aaKnown RBP16.35■□□□□ 0.21
NR1I3-210ENST00000437437 BICC1Q9H694 974 aaKnown RBP16.35■□□□□ 0.21
NR1I3-210ENST00000437437 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
NR1I3-210ENST00000437437 LTBP1Q14766 1721 aa16.34■□□□□ 0.21
NR1I3-210ENST00000437437 GRAPQ13588 217 aa16.34■□□□□ 0.21
NR1I3-210ENST00000437437 AAMPQ13685 434 aa16.34■□□□□ 0.21
NR1I3-210ENST00000437437 LMBR1LQ6UX01 489 aa16.34■□□□□ 0.21
NR1I3-210ENST00000437437 DDX46Q7L014 1031 aaKnown RBP16.34■□□□□ 0.21
NR1I3-210ENST00000437437 TMC4Q7Z404 712 aa16.34■□□□□ 0.21
NR1I3-210ENST00000437437 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
NR1I3-210ENST00000437437 TTLL6Q8N841 843 aa16.34■□□□□ 0.21
NR1I3-210ENST00000437437 GRAPLQ8TC17 118 aaPredicted RBP16.34■□□□□ 0.21
NR1I3-210ENST00000437437 GREM2Q9H772 168 aa16.34■□□□□ 0.21
NR1I3-210ENST00000437437 LRRFIP2Q9Y608 721 aaKnown RBP16.34■□□□□ 0.21
NR1I3-210ENST00000437437 A0A1B0GUL6 1792 aa16.33■□□□□ 0.21
NR1I3-210ENST00000437437 FAM161AQ3B820 660 aa16.33■□□□□ 0.2
NR1I3-210ENST00000437437 C7orf43Q8WVR3 580 aa16.33■□□□□ 0.2
NR1I3-210ENST00000437437 GOLGB1Q14789 3259 aaKnown RBP16.33■□□□□ 0.2
NR1I3-210ENST00000437437 SPEF2Q9C093 1822 aa16.33■□□□□ 0.2
NR1I3-210ENST00000437437 FER1L6Q2WGJ9 1857 aa16.33■□□□□ 0.2
NR1I3-210ENST00000437437 BBOX1O75936 387 aa16.32■□□□□ 0.2
NR1I3-210ENST00000437437 PRPF40BQ6NWY9 871 aaKnown RBP16.32■□□□□ 0.2
NR1I3-210ENST00000437437 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
NR1I3-210ENST00000437437 ITGA6P23229 1130 aa16.31■□□□□ 0.2
NR1I3-210ENST00000437437 DALRD3Q5D0E6 543 aaKnown RBP16.31■□□□□ 0.2
NR1I3-210ENST00000437437 ZNF622Q969S3 477 aaKnown RBP eCLIP16.31■□□□□ 0.2
NR1I3-210ENST00000437437 CDC5LQ99459 802 aaKnown RBP16.31■□□□□ 0.2
NR1I3-210ENST00000437437 SEC31BQ9NQW1 1179 aa16.31■□□□□ 0.2
NR1I3-210ENST00000437437 ANKRD18BA2A2Z9 1011 aa16.3■□□□□ 0.2
NR1I3-210ENST00000437437 RFX5P48382 616 aaPredicted RBP16.3■□□□□ 0.2
NR1I3-210ENST00000437437 RPS8P62241 208 aaKnown RBP16.3■□□□□ 0.2
NR1I3-210ENST00000437437 IFIT5Q13325 482 aaKnown RBP16.3■□□□□ 0.2
NR1I3-210ENST00000437437 CELF1Q92879 486 aaKnown RBP16.3■□□□□ 0.2
NR1I3-210ENST00000437437 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
NR1I3-210ENST00000437437 SOGA3Q5TF21 947 aa16.29■□□□□ 0.2
NR1I3-210ENST00000437437 CC2D2BQ6DHV5 1058 aa16.29■□□□□ 0.2
NR1I3-210ENST00000437437 CEP85Q6P2H3 762 aa16.29■□□□□ 0.2
NR1I3-210ENST00000437437 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
NR1I3-210ENST00000437437 CRBNQ96SW2 442 aa16.29■□□□□ 0.2
NR1I3-210ENST00000437437 BSDC1Q9NW68 430 aaPredicted RBP16.29■□□□□ 0.2
NR1I3-210ENST00000437437 FBXO3Q9UK99 471 aa16.29■□□□□ 0.2
NR1I3-210ENST00000437437 ATP6V0A2Q9Y487 856 aa16.29■□□□□ 0.2
NR1I3-210ENST00000437437 DUOX1Q9NRD9 1551 aa16.29■□□□□ 0.2
NR1I3-210ENST00000437437 PPEF1O14829 653 aaPredicted RBP16.28■□□□□ 0.2
NR1I3-210ENST00000437437 POLA2Q14181 598 aa16.28■□□□□ 0.2
NR1I3-210ENST00000437437 CCDC57Q2TAC2 916 aa16.28■□□□□ 0.2
NR1I3-210ENST00000437437 ANKRD18AQ8IVF6 992 aa16.28■□□□□ 0.2
NR1I3-210ENST00000437437 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
NR1I3-210ENST00000437437 SP8Q8IXZ3 490 aa16.28■□□□□ 0.2
NR1I3-210ENST00000437437 SSH3Q8TE77 659 aa16.28■□□□□ 0.2
NR1I3-210ENST00000437437 ATP8B2P98198 1209 aa16.27■□□□□ 0.2
NR1I3-210ENST00000437437 CCDC85AQ96PX6 553 aaPredicted RBP16.27■□□□□ 0.2
NR1I3-210ENST00000437437 COPRSQ9NQ92 184 aa16.27■□□□□ 0.2
NR1I3-210ENST00000437437 LTBP3Q9NS15 1303 aa16.26■□□□□ 0.19
NR1I3-210ENST00000437437 PNMA6EA0A0J9YXQ4 647 aa16.26■□□□□ 0.19
NR1I3-210ENST00000437437 SRGAP3O43295 1099 aa16.26■□□□□ 0.19
NR1I3-210ENST00000437437 YBX3P16989 372 aaKnown RBP eCLIP16.26■□□□□ 0.19
NR1I3-210ENST00000437437 IGHMBP2P38935 993 aaKnown RBP16.26■□□□□ 0.19
NR1I3-210ENST00000437437 PTPN12Q05209 780 aaKnown RBP16.26■□□□□ 0.19
NR1I3-210ENST00000437437 C1orf115Q9H7X2 142 aa16.26■□□□□ 0.19
NR1I3-210ENST00000437437 BCS1LQ9Y276 419 aa16.26■□□□□ 0.19
NR1I3-210ENST00000437437 CHMP3Q9Y3E7 222 aa16.26■□□□□ 0.19
NR1I3-210ENST00000437437 CIAO1O76071 339 aa16.25■□□□□ 0.19
NR1I3-210ENST00000437437 CCDC93Q567U6 631 aa16.25■□□□□ 0.19
NR1I3-210ENST00000437437 PODXL2Q9NZ53 605 aa16.25■□□□□ 0.19
NR1I3-210ENST00000437437 SIRT2Q8IXJ6 389 aa16.24■□□□□ 0.19
NR1I3-210ENST00000437437 RTFDC1Q9BY42 306 aaPredicted RBP16.24■□□□□ 0.19
NR1I3-210ENST00000437437 RIPOR2Q9Y4F9 1068 aa16.24■□□□□ 0.19
NR1I3-210ENST00000437437 SBF1O95248 1867 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms