RNA–Protein interactions for RNA: ENST00000437413.2

SMG1P3-202, Transcript of SMG1 pseudogene 3, humanhuman

TSL 4

Gene SMG1P3, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-202ENST00000437413 RTL9Q8NET4 1388 aa27.64■■■□□ 2.02
SMG1P3-202ENST00000437413 BBOX1O75936 387 aa27.64■■■□□ 2.02
SMG1P3-202ENST00000437413 TMC4Q7Z404 712 aa27.64■■■□□ 2.02
SMG1P3-202ENST00000437413 WWC3Q9ULE0 1092 aa27.64■■■□□ 2.02
SMG1P3-202ENST00000437413 SLX4Q8IY92 1834 aa27.64■■■□□ 2.01
SMG1P3-202ENST00000437413 GRAPQ13588 217 aa27.63■■■□□ 2.01
SMG1P3-202ENST00000437413 GRIPAP1Q4V328 841 aa27.63■■■□□ 2.01
SMG1P3-202ENST00000437413 CC2D2BQ6DHV5 1058 aa27.63■■■□□ 2.01
SMG1P3-202ENST00000437413 GRAPLQ8TC17 118 aaPredicted RBP27.63■■■□□ 2.01
SMG1P3-202ENST00000437413 JARID2Q92833 1246 aaPredicted RBP27.63■■■□□ 2.01
SMG1P3-202ENST00000437413 FTSJ3Q8IY81 847 aaKnown RBP27.62■■■□□ 2.01
SMG1P3-202ENST00000437413 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.62■■■□□ 2.01
SMG1P3-202ENST00000437413 TTLL11Q8NHH1 800 aa27.61■■■□□ 2.01
SMG1P3-202ENST00000437413 USP44Q9H0E7 712 aa27.61■■■□□ 2.01
SMG1P3-202ENST00000437413 CSF1RP07333 972 aa27.6■■■□□ 2.01
SMG1P3-202ENST00000437413 DZIP1LQ8IYY4 767 aaKnown RBP27.6■■■□□ 2.01
SMG1P3-202ENST00000437413 C7orf43Q8WVR3 580 aa27.6■■■□□ 2.01
SMG1P3-202ENST00000437413 TMX4Q9H1E5 349 aaPredicted RBP27.6■■■□□ 2.01
SMG1P3-202ENST00000437413 PPEF1O14829 653 aaPredicted RBP27.59■■■□□ 2.01
SMG1P3-202ENST00000437413 NBPF7P0C2Y1 421 aaPredicted RBP27.59■■■□□ 2.01
SMG1P3-202ENST00000437413 GOLGB1Q14789 3259 aaKnown RBP27.59■■■□□ 2.01
SMG1P3-202ENST00000437413 C21orf2O43822 256 aa27.58■■■□□ 2.01
SMG1P3-202ENST00000437413 CDC5LQ99459 802 aaKnown RBP27.58■■■□□ 2.01
SMG1P3-202ENST00000437413 CCDC93Q567U6 631 aa27.57■■■□□ 2
SMG1P3-202ENST00000437413 CLUAP1Q96AJ1 413 aa27.57■■■□□ 2
SMG1P3-202ENST00000437413 GNAI3P08754 354 aa27.56■■■□□ 2
SMG1P3-202ENST00000437413 FOXO4P98177 505 aa27.56■■■□□ 2
SMG1P3-202ENST00000437413 ARHGAP27Q6ZUM4 889 aa27.56■■■□□ 2
SMG1P3-202ENST00000437413 RTKN2Q8IZC4 609 aa27.56■■■□□ 2
SMG1P3-202ENST00000437413 ATP6V0A2Q9Y487 856 aa27.56■■■□□ 2
SMG1P3-202ENST00000437413 CHD4Q14839 1912 aa27.56■■■□□ 2
SMG1P3-202ENST00000437413 FER1L6Q2WGJ9 1857 aa27.55■■■□□ 2
SMG1P3-202ENST00000437413 UBTFL1P0CB47 393 aaPredicted RBP27.55■■■□□ 2
SMG1P3-202ENST00000437413 RPS8P62241 208 aaKnown RBP27.55■■■□□ 2
SMG1P3-202ENST00000437413 SP8Q8IXZ3 490 aa27.55■■■□□ 2
SMG1P3-202ENST00000437413 LTBP3Q9NS15 1303 aa27.55■■■□□ 2
SMG1P3-202ENST00000437413 TMEM57Q8N5G2 664 aa27.54■■■□□ 2
SMG1P3-202ENST00000437413 SUCLG2Q96I99 432 aa27.54■■■□□ 2
SMG1P3-202ENST00000437413 GREM2Q9H772 168 aa27.54■■■□□ 2
SMG1P3-202ENST00000437413 RABL6Q3YEC7 729 aaPredicted RBP27.53■■■□□ 2
SMG1P3-202ENST00000437413 ANKRD18AQ8IVF6 992 aa27.53■■■□□ 2
SMG1P3-202ENST00000437413 CELF1Q92879 486 aaKnown RBP27.53■■■□□ 2
SMG1P3-202ENST00000437413 LRRC37AA6NMS7 1700 aa27.53■■■□□ 2
SMG1P3-202ENST00000437413 LMBR1LQ6UX01 489 aa27.52■■■□□ 2
SMG1P3-202ENST00000437413 SEC31BQ9NQW1 1179 aa27.52■■■□□ 2
SMG1P3-202ENST00000437413 ZNF219Q9P2Y4 722 aaPredicted RBP27.52■■■□□ 2
SMG1P3-202ENST00000437413 TNNQ9UQP3 1299 aa27.52■■■□□ 2
SMG1P3-202ENST00000437413 ANKRD18BA2A2Z9 1011 aa27.51■■□□□ 1.99
SMG1P3-202ENST00000437413 ITGA6P23229 1130 aa27.51■■□□□ 1.99
SMG1P3-202ENST00000437413 IFIT5Q13325 482 aaKnown RBP27.51■■□□□ 1.99
SMG1P3-202ENST00000437413 PDE3AQ14432 1141 aa27.51■■□□□ 1.99
SMG1P3-202ENST00000437413 KAZALD1Q96I82 304 aa27.51■■□□□ 1.99
SMG1P3-202ENST00000437413 TAF1P21675 1872 aa27.51■■□□□ 1.99
SMG1P3-202ENST00000437413 SNED1Q8TER0 1413 aa27.5■■□□□ 1.99
SMG1P3-202ENST00000437413 YY1P25490 414 aa27.5■■□□□ 1.99
SMG1P3-202ENST00000437413 CCDC57Q2TAC2 916 aa27.5■■□□□ 1.99
SMG1P3-202ENST00000437413 FAM161AQ3B820 660 aa27.5■■□□□ 1.99
SMG1P3-202ENST00000437413 EPHA10Q5JZY3 1008 aa27.5■■□□□ 1.99
SMG1P3-202ENST00000437413 CCDC85AQ96PX6 553 aaPredicted RBP27.5■■□□□ 1.99
SMG1P3-202ENST00000437413 PSMD1Q99460 953 aa27.5■■□□□ 1.99
SMG1P3-202ENST00000437413 TAOK3Q9H2K8 898 aa27.5■■□□□ 1.99
SMG1P3-202ENST00000437413 BICC1Q9H694 974 aaKnown RBP27.5■■□□□ 1.99
SMG1P3-202ENST00000437413 IGHMBP2P38935 993 aaKnown RBP27.49■■□□□ 1.99
SMG1P3-202ENST00000437413 ITPRIPQ8IWB1 547 aa27.49■■□□□ 1.99
SMG1P3-202ENST00000437413 MEIS3Q99687 375 aa27.49■■□□□ 1.99
SMG1P3-202ENST00000437413 NFKBIEO00221 500 aa27.48■■□□□ 1.99
SMG1P3-202ENST00000437413 RLBP1P12271 317 aa27.48■■□□□ 1.99
SMG1P3-202ENST00000437413 FKBP4Q02790 459 aaKnown RBP eCLIP27.48■■□□□ 1.993e-6■■□□□ 11.5
SMG1P3-202ENST00000437413 CHMP4BQ9H444 224 aaKnown RBP27.48■■□□□ 1.99
SMG1P3-202ENST00000437413 BSDC1Q9NW68 430 aaPredicted RBP27.48■■□□□ 1.99
SMG1P3-202ENST00000437413 CHMP3Q9Y3E7 222 aa27.48■■□□□ 1.99
SMG1P3-202ENST00000437413 UTRNP46939 3433 aa27.47■■□□□ 1.99
SMG1P3-202ENST00000437413 LMNB1P20700 586 aa27.46■■□□□ 1.99
SMG1P3-202ENST00000437413 ANKRD44Q8N8A2 993 aa27.46■■□□□ 1.99
SMG1P3-202ENST00000437413 SUPT20HQ8NEM7 779 aa27.46■■□□□ 1.99
SMG1P3-202ENST00000437413 VPS33BQ9H267 617 aa27.46■■□□□ 1.99
SMG1P3-202ENST00000437413 SBF1O95248 1867 aa27.46■■□□□ 1.99
SMG1P3-202ENST00000437413 MPHOSPH8Q99549 860 aa27.45■■□□□ 1.98
SMG1P3-202ENST00000437413 COL4A1P02462 1669 aa27.44■■□□□ 1.98
SMG1P3-202ENST00000437413 GNAI2P04899 355 aa27.44■■□□□ 1.98
SMG1P3-202ENST00000437413 MVPQ14764 893 aaKnown RBP27.44■■□□□ 1.98
SMG1P3-202ENST00000437413 MPNDQ8N594 471 aa27.44■■□□□ 1.98
SMG1P3-202ENST00000437413 PANK1Q8TE04 598 aa27.44■■□□□ 1.98
SMG1P3-202ENST00000437413 RTFDC1Q9BY42 306 aaPredicted RBP27.44■■□□□ 1.98
SMG1P3-202ENST00000437413 DDX19BQ9UMR2 479 aa27.44■■□□□ 1.98
SMG1P3-202ENST00000437413 LRRFIP2Q9Y608 721 aaKnown RBP27.44■■□□□ 1.98
SMG1P3-202ENST00000437413 PLIN1O60240 522 aa27.43■■□□□ 1.98
SMG1P3-202ENST00000437413 TAF7LQ5H9L4 462 aa27.43■■□□□ 1.98
SMG1P3-202ENST00000437413 OLFM4Q6UX06 510 aa27.43■■□□□ 1.98
SMG1P3-202ENST00000437413 DPP8Q6V1X1 898 aaPredicted RBP27.43■■□□□ 1.98
SMG1P3-202ENST00000437413 PODXL2Q9NZ53 605 aa27.43■■□□□ 1.98
SMG1P3-202ENST00000437413 ZC3H4Q9UPT8 1303 aaKnown RBP27.42■■□□□ 1.98
SMG1P3-202ENST00000437413 ZBTB7BO15156 539 aaPredicted RBP27.42■■□□□ 1.98
SMG1P3-202ENST00000437413 RASSF7Q02833 373 aa27.42■■□□□ 1.98
SMG1P3-202ENST00000437413 SPEF2Q9C093 1822 aa27.41■■□□□ 1.98
SMG1P3-202ENST00000437413 RRP1P56182 461 aaKnown RBP27.41■■□□□ 1.98
SMG1P3-202ENST00000437413 DICER1Q9UPY3 1922 aaKnown RBP27.41■■□□□ 1.98
SMG1P3-202ENST00000437413 MTX1Q13505 466 aa27.4■■□□□ 1.98
SMG1P3-202ENST00000437413 XDHP47989 1333 aa27.4■■□□□ 1.98
SMG1P3-202ENST00000437413 LTBP1Q14766 1721 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms