RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 RBM17Q96I25 401 aaKnown RBP16.84■□□□□ 0.29
EXT1-203ENST00000437196 BICC1Q9H694 974 aaKnown RBP16.84■□□□□ 0.29
EXT1-203ENST00000437196 RTL9Q8NET4 1388 aa16.83■□□□□ 0.29
EXT1-203ENST00000437196 NPR1P16066 1061 aa16.83■□□□□ 0.28
EXT1-203ENST00000437196 LMBR1LQ6UX01 489 aa16.83■□□□□ 0.28
EXT1-203ENST00000437196 C2CD5Q86YS7 1000 aa16.83■□□□□ 0.28
EXT1-203ENST00000437196 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.28
EXT1-203ENST00000437196 CHMP3Q9Y3E7 222 aa16.83■□□□□ 0.28
EXT1-203ENST00000437196 SRGNP10124 158 aa16.82■□□□□ 0.28
EXT1-203ENST00000437196 ALDH1B1P30837 517 aa16.82■□□□□ 0.28
EXT1-203ENST00000437196 IFIT5Q13325 482 aaKnown RBP16.82■□□□□ 0.28
EXT1-203ENST00000437196 MTX1Q13505 466 aa16.82■□□□□ 0.28
EXT1-203ENST00000437196 CCDC57Q2TAC2 916 aa16.82■□□□□ 0.28
EXT1-203ENST00000437196 STYK1Q6J9G0 422 aa16.82■□□□□ 0.28
EXT1-203ENST00000437196 KAZALD1Q96I82 304 aa16.82■□□□□ 0.28
EXT1-203ENST00000437196 CDC5LQ99459 802 aaKnown RBP16.82■□□□□ 0.28
EXT1-203ENST00000437196 TNRC6CQ9HCJ0 1690 aaKnown RBP16.82■□□□□ 0.28
EXT1-203ENST00000437196 ANKRD18BA2A2Z9 1011 aa16.81■□□□□ 0.28
EXT1-203ENST00000437196 HMMRO75330 724 aa16.81■□□□□ 0.28
EXT1-203ENST00000437196 HOXA10P31260 410 aaPredicted RBP16.81■□□□□ 0.28
EXT1-203ENST00000437196 CNKSR1Q969H4 720 aa16.81■□□□□ 0.28
EXT1-203ENST00000437196 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
EXT1-203ENST00000437196 TAF7LQ5H9L4 462 aa16.8■□□□□ 0.28
EXT1-203ENST00000437196 EPHA10Q5JZY3 1008 aa16.8■□□□□ 0.28
EXT1-203ENST00000437196 ANKRD44Q8N8A2 993 aa16.8■□□□□ 0.28
EXT1-203ENST00000437196 EXOC6Q8TAG9 804 aa16.8■□□□□ 0.28
EXT1-203ENST00000437196 CRAMP1Q96RY5 1269 aa16.8■□□□□ 0.28
EXT1-203ENST00000437196 SRGAP3O43295 1099 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 ITGA6P23229 1130 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 ATP8B2P98198 1209 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 ERICH6BQ5W0A0 696 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 C3orf67Q6ZVT6 689 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 TMC4Q7Z404 712 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 ZNF622Q969S3 477 aaKnown RBP eCLIP16.79■□□□□ 0.28
EXT1-203ENST00000437196 FHDC1Q9C0D6 1143 aaPredicted RBP16.79■□□□□ 0.28
EXT1-203ENST00000437196 GREM2Q9H772 168 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 C1orf115Q9H7X2 142 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 DLEC1Q9Y238 1755 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 BBOX1O75936 387 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 IGHMBP2P38935 993 aaKnown RBP16.79■□□□□ 0.28
EXT1-203ENST00000437196 GRAPQ13588 217 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 FAM161AQ3B820 660 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 CEP85Q6P2H3 762 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 ANKRD18AQ8IVF6 992 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 GRAPLQ8TC17 118 aaPredicted RBP16.79■□□□□ 0.28
EXT1-203ENST00000437196 CCDC85AQ96PX6 553 aaPredicted RBP16.79■□□□□ 0.28
EXT1-203ENST00000437196 TMX4Q9H1E5 349 aaPredicted RBP16.79■□□□□ 0.28
EXT1-203ENST00000437196 PIM2Q9P1W9 311 aa16.79■□□□□ 0.28
EXT1-203ENST00000437196 DPEP1P16444 411 aa16.78■□□□□ 0.28
EXT1-203ENST00000437196 COL11A2P13942 1736 aaPredicted RBP16.77■□□□□ 0.28
EXT1-203ENST00000437196 A0A0G2JLW4 131 aa16.77■□□□□ 0.27
EXT1-203ENST00000437196 CHRNA5P30532 468 aa16.77■□□□□ 0.27
EXT1-203ENST00000437196 RPS8P62241 208 aaKnown RBP16.77■□□□□ 0.27
EXT1-203ENST00000437196 TTLL6Q8N841 843 aa16.77■□□□□ 0.27
EXT1-203ENST00000437196 MPHOSPH8Q99549 860 aa16.77■□□□□ 0.27
EXT1-203ENST00000437196 SYT17Q9BSW7 474 aa16.77■□□□□ 0.27
EXT1-203ENST00000437196 FBXO3Q9UK99 471 aa16.77■□□□□ 0.27
EXT1-203ENST00000437196 SRCAPQ6ZRS2 3230 aa16.76■□□□□ 0.27
EXT1-203ENST00000437196 SSH3Q8TE77 659 aa16.76■□□□□ 0.27
EXT1-203ENST00000437196 SEC31BQ9NQW1 1179 aa16.75■□□□□ 0.27
EXT1-203ENST00000437196 KIAA1551Q9HCM1 1747 aa16.74■□□□□ 0.27
EXT1-203ENST00000437196 PNMA6EA0A0J9YXQ4 647 aa16.74■□□□□ 0.27
EXT1-203ENST00000437196 POLA2Q14181 598 aa16.74■□□□□ 0.27
EXT1-203ENST00000437196 GRIPAP1Q4V328 841 aa16.74■□□□□ 0.27
EXT1-203ENST00000437196 HSP90AB4PQ58FF6 505 aa16.74■□□□□ 0.27
EXT1-203ENST00000437196 DALRD3Q5D0E6 543 aaKnown RBP16.74■□□□□ 0.27
EXT1-203ENST00000437196 SOGA3Q5TF21 947 aa16.74■□□□□ 0.27
EXT1-203ENST00000437196 LDHAL6AQ6ZMR3 332 aa16.74■□□□□ 0.27
EXT1-203ENST00000437196 COPRSQ9NQ92 184 aa16.74■□□□□ 0.27
EXT1-203ENST00000437196 BSDC1Q9NW68 430 aaPredicted RBP16.74■□□□□ 0.27
EXT1-203ENST00000437196 PPEF1O14829 653 aaPredicted RBP16.73■□□□□ 0.27
EXT1-203ENST00000437196 KCNA3P22001 575 aa16.73■□□□□ 0.27
EXT1-203ENST00000437196 BRCA1P38398 1863 aaKnown RBP16.73■□□□□ 0.27
EXT1-203ENST00000437196 CC2D2BQ6DHV5 1058 aa16.73■□□□□ 0.27
EXT1-203ENST00000437196 PRPF40BQ6NWY9 871 aaKnown RBP16.73■□□□□ 0.27
EXT1-203ENST00000437196 CELF1Q92879 486 aaKnown RBP16.73■□□□□ 0.27
EXT1-203ENST00000437196 RWDD1Q9H446 243 aaPredicted RBP16.73■□□□□ 0.27
EXT1-203ENST00000437196 RFX5P48382 616 aaPredicted RBP16.72■□□□□ 0.27
EXT1-203ENST00000437196 PTPN12Q05209 780 aaKnown RBP16.72■□□□□ 0.27
EXT1-203ENST00000437196 NLGN2Q8NFZ4 835 aa16.72■□□□□ 0.27
EXT1-203ENST00000437196 CNNM1Q9NRU3 951 aa16.72■□□□□ 0.27
EXT1-203ENST00000437196 PCDHB15Q9Y5E8 787 aa16.72■□□□□ 0.27
EXT1-203ENST00000437196 CACNA1SQ13698 1873 aa16.72■□□□□ 0.27
EXT1-203ENST00000437196 CIAO1O76071 339 aa16.71■□□□□ 0.27
EXT1-203ENST00000437196 G3BP1Q13283 466 aaKnown RBP eCLIP16.71■□□□□ 0.27
EXT1-203ENST00000437196 HDAC1Q13547 482 aaPredicted RBP16.71■□□□□ 0.27
EXT1-203ENST00000437196 SP8Q8IXZ3 490 aa16.71■□□□□ 0.27
EXT1-203ENST00000437196 ATP6V0A2Q9Y487 856 aa16.71■□□□□ 0.27
EXT1-203ENST00000437196 TAF1P21675 1872 aa16.71■□□□□ 0.27
EXT1-203ENST00000437196 EYA2O00167 538 aa16.7■□□□□ 0.26
EXT1-203ENST00000437196 SURF6O75683 361 aaKnown RBP16.7■□□□□ 0.26
EXT1-203ENST00000437196 IL15P40933 162 aaPredicted RBP16.7■□□□□ 0.26
EXT1-203ENST00000437196 ERC1Q8IUD2 1116 aa16.7■□□□□ 0.26
EXT1-203ENST00000437196 SIRT2Q8IXJ6 389 aa16.7■□□□□ 0.26
EXT1-203ENST00000437196 ANKRD2Q9GZV1 360 aa16.7■□□□□ 0.26
EXT1-203ENST00000437196 MROH5Q6ZUA9 1318 aa16.7■□□□□ 0.26
EXT1-203ENST00000437196 SLX4Q8IY92 1834 aa16.7■□□□□ 0.26
EXT1-203ENST00000437196 OS9Q13438 667 aaPredicted RBP16.7■□□□□ 0.26
EXT1-203ENST00000437196 ZNF594Q96JF6 807 aaPredicted RBP16.7■□□□□ 0.26
EXT1-203ENST00000437196 NOP58Q9Y2X3 529 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms