RNA–Protein interactions for RNA: ENST00000436754.5

PDLIM2-211, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-211ENST00000436754 DEFB115Q30KQ5 88 aa14.19□□□□□ -0.14
PDLIM2-211ENST00000436754 PRDM10Q9NQV6 1147 aa14.19□□□□□ -0.14
PDLIM2-211ENST00000436754 ZNRF3Q9ULT6 936 aa14.19□□□□□ -0.14
PDLIM2-211ENST00000436754 TCERG1O14776 1098 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-211ENST00000436754 PPIP5K2O43314 1243 aa14.18□□□□□ -0.14
PDLIM2-211ENST00000436754 TMC4Q7Z404 712 aa14.18□□□□□ -0.14
PDLIM2-211ENST00000436754 C8orf58Q8NAV2 365 aa14.18□□□□□ -0.14
PDLIM2-211ENST00000436754 PLBD2Q8NHP8 589 aa14.18□□□□□ -0.14
PDLIM2-211ENST00000436754 WBP1LQ9NX94 342 aa14.18□□□□□ -0.14
PDLIM2-211ENST00000436754 TRMT112Q9UI30 125 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-211ENST00000436754 SH3TC1Q8TE82 1336 aa14.17□□□□□ -0.14
PDLIM2-211ENST00000436754 GRAPQ13588 217 aa14.17□□□□□ -0.14
PDLIM2-211ENST00000436754 AOC3Q16853 763 aa14.17□□□□□ -0.14
PDLIM2-211ENST00000436754 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-211ENST00000436754 DDX46Q7L014 1031 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-211ENST00000436754 MPNDQ8N594 471 aa14.17□□□□□ -0.14
PDLIM2-211ENST00000436754 GRAPLQ8TC17 118 aaPredicted RBP14.17□□□□□ -0.14
PDLIM2-211ENST00000436754 HYPKQ9NX55 129 aa14.17□□□□□ -0.14
PDLIM2-211ENST00000436754 GPRC5DQ9NZD1 345 aa14.17□□□□□ -0.14
PDLIM2-211ENST00000436754 LTBP1Q14766 1721 aa14.17□□□□□ -0.14
PDLIM2-211ENST00000436754 IL16Q14005 1332 aa14.16□□□□□ -0.14
PDLIM2-211ENST00000436754 FOXN1O15353 648 aa14.16□□□□□ -0.14
PDLIM2-211ENST00000436754 HCLS1P14317 486 aaPredicted RBP14.16□□□□□ -0.14
PDLIM2-211ENST00000436754 CXCL9Q07325 125 aa14.16□□□□□ -0.14
PDLIM2-211ENST00000436754 KIAA2012Q0VF49 1180 aa14.16□□□□□ -0.14
PDLIM2-211ENST00000436754 TRIM28Q13263 835 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-211ENST00000436754 DPP8Q6V1X1 898 aaPredicted RBP14.16□□□□□ -0.14
PDLIM2-211ENST00000436754 ANKRD13DQ6ZTN6 518 aa14.16□□□□□ -0.14
PDLIM2-211ENST00000436754 SLC51AQ86UW1 340 aa14.16□□□□□ -0.14
PDLIM2-211ENST00000436754 ADARB2Q9NS39 739 aaKnown RBP14.16□□□□□ -0.14
PDLIM2-211ENST00000436754 PGAP2Q9UHJ9 254 aa14.16□□□□□ -0.14
PDLIM2-211ENST00000436754 CTCFP49711 727 aaPredicted RBP14.15□□□□□ -0.14
PDLIM2-211ENST00000436754 TNIP1Q15025 636 aa14.15□□□□□ -0.14
PDLIM2-211ENST00000436754 SF3B3Q15393 1217 aaKnown RBP14.15□□□□□ -0.14
PDLIM2-211ENST00000436754 CCDC30Q5VVM6 783 aa14.15□□□□□ -0.14
PDLIM2-211ENST00000436754 TSPYL6Q8N831 410 aa14.15□□□□□ -0.14
PDLIM2-211ENST00000436754 AIDAQ96BJ3 306 aa14.15□□□□□ -0.14
PDLIM2-211ENST00000436754 ISCA1Q9BUE6 129 aa14.15□□□□□ -0.14
PDLIM2-211ENST00000436754 CHMP4AQ9BY43 222 aa14.15□□□□□ -0.14
PDLIM2-211ENST00000436754 CDHR2Q9BYE9 1310 aa14.15□□□□□ -0.15
PDLIM2-211ENST00000436754 WDR33Q9C0J8 1336 aaKnown RBP14.15□□□□□ -0.15
PDLIM2-211ENST00000436754 MAP2K1Q02750 393 aaPredicted RBP14.14□□□□□ -0.15
PDLIM2-211ENST00000436754 GOLGA2Q08379 1002 aa14.14□□□□□ -0.15
PDLIM2-211ENST00000436754 CST9Q5W186 159 aa14.14□□□□□ -0.15
PDLIM2-211ENST00000436754 WDR63Q8IWG1 891 aa14.14□□□□□ -0.15
PDLIM2-211ENST00000436754 ZC3H15Q8WU90 426 aaKnown RBP14.14□□□□□ -0.15
PDLIM2-211ENST00000436754 FANCIQ9NVI1 1328 aa14.14□□□□□ -0.15
PDLIM2-211ENST00000436754 CIAPIN1Q6FI81 312 aa14.13□□□□□ -0.15
PDLIM2-211ENST00000436754 ABT1Q9ULW3 272 aaKnown RBP14.13□□□□□ -0.15
PDLIM2-211ENST00000436754 LAMB2P55268 1798 aa14.13□□□□□ -0.15
PDLIM2-211ENST00000436754 ECE1P42892 770 aa14.12□□□□□ -0.15
PDLIM2-211ENST00000436754 TWISTNBQ3B726 338 aaPredicted RBP14.12□□□□□ -0.15
PDLIM2-211ENST00000436754 RIC3Q7Z5B4 369 aa14.12□□□□□ -0.15
PDLIM2-211ENST00000436754 ZNF428Q96B54 188 aa14.12□□□□□ -0.15
PDLIM2-211ENST00000436754 STK31Q9BXU1 1019 aa14.12□□□□□ -0.15
PDLIM2-211ENST00000436754 PHAXQ9H814 394 aaKnown RBP14.12□□□□□ -0.15
PDLIM2-211ENST00000436754 ATP5J2-PTCD1G3V325 749 aa14.11□□□□□ -0.15
PDLIM2-211ENST00000436754 CAPN15O75808 1086 aa14.11□□□□□ -0.15
PDLIM2-211ENST00000436754 GMPSP49915 693 aaPredicted RBP14.11□□□□□ -0.15
PDLIM2-211ENST00000436754 FAM89AQ96GI7 184 aa14.11□□□□□ -0.15
PDLIM2-211ENST00000436754 TLL2Q9Y6L7 1015 aa14.11□□□□□ -0.15
PDLIM2-211ENST00000436754 DDX58O95786 925 aaKnown RBP14.1□□□□□ -0.15
PDLIM2-211ENST00000436754 FMR1Q06787 632 aaKnown RBP eCLIP14.1□□□□□ -0.15
PDLIM2-211ENST00000436754 DPF2Q92785 391 aa14.1□□□□□ -0.15
PDLIM2-211ENST00000436754 HHIPL1Q96JK4 782 aa14.1□□□□□ -0.15
PDLIM2-211ENST00000436754 CACNA1FO60840 1977 aa14.1□□□□□ -0.15
PDLIM2-211ENST00000436754 YDJCA8MPS7 323 aa14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 TRAF5O00463 557 aa14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 RAD17O75943 681 aa14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 HSP90B1P14625 803 aaKnown RBP14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 MAP2K2P36507 400 aa14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 LBX1P52954 281 aa14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 HIRAP54198 1017 aaPredicted RBP14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 WASHC4Q2M389 1173 aa14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 CDC37L1Q7L3B6 337 aa14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 CELF1Q92879 486 aaKnown RBP14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 CAPNS2Q96L46 248 aa14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 BCL2L13Q9BXK5 485 aa14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 MYH16Q9H6N6 1097 aa14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 CNOT7Q9UIV1 285 aaKnown RBP14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 TRPM7Q96QT4 1865 aa14.09□□□□□ -0.15
PDLIM2-211ENST00000436754 LRRC37AA6NMS7 1700 aa14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 DDX60Q8IY21 1712 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 H7C1D1 291 aa14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 CCER2I3L3R5 266 aa14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 IRS4O14654 1257 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 HSPA8P11142 646 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 RPS8P62241 208 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 EXOSC9Q06265 439 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 SAPCD2Q86UD0 394 aa14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 ZBTB38Q8NAP3 1195 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 GPR101Q96P66 508 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 MYD88Q99836 296 aa14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 NSFL1CQ9UNZ2 370 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 DUOX1Q9NRD9 1551 aa14.08□□□□□ -0.16
PDLIM2-211ENST00000436754 RTL5Q5HYW3 569 aaPredicted RBP14.07□□□□□ -0.16
PDLIM2-211ENST00000436754 CCDC191Q8NCU4 936 aa14.07□□□□□ -0.16
PDLIM2-211ENST00000436754 EYA3Q99504 573 aa14.07□□□□□ -0.16
PDLIM2-211ENST00000436754 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
PDLIM2-211ENST00000436754 PODXL2Q9NZ53 605 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms