RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 MBIPQ9NS73 344 aa14.01□□□□□ -0.17
HMGCL-204ENST00000436439 CHPF2Q9P2E5 772 aa14.01□□□□□ -0.17
HMGCL-204ENST00000436439 COL4A1P02462 1669 aa14□□□□□ -0.17
HMGCL-204ENST00000436439 LRRC37AA6NMS7 1700 aa14□□□□□ -0.17
HMGCL-204ENST00000436439 HCLS1P14317 486 aaPredicted RBP14□□□□□ -0.17
HMGCL-204ENST00000436439 TCIRG1Q13488 830 aa14□□□□□ -0.17
HMGCL-204ENST00000436439 LARGE2Q8N3Y3 721 aa14□□□□□ -0.17
HMGCL-204ENST00000436439 CLEC11AQ9Y240 323 aa14□□□□□ -0.17
HMGCL-204ENST00000436439 GJA3Q9Y6H8 435 aa14□□□□□ -0.17
HMGCL-204ENST00000436439 EIF6P56537 245 aaKnown RBP13.99□□□□□ -0.17
HMGCL-204ENST00000436439 EXOSC9Q06265 439 aaKnown RBP13.99□□□□□ -0.17
HMGCL-204ENST00000436439 MAP1SQ66K74 1059 aaPredicted RBP13.99□□□□□ -0.17
HMGCL-204ENST00000436439 ATP6V0A2Q9Y487 856 aa13.99□□□□□ -0.17
HMGCL-204ENST00000436439 DUOX1Q9NRD9 1551 aa13.98□□□□□ -0.17
HMGCL-204ENST00000436439 SCNN1DP51172 638 aa13.98□□□□□ -0.17
HMGCL-204ENST00000436439 AOC3Q16853 763 aa13.98□□□□□ -0.17
HMGCL-204ENST00000436439 HSP90AB3PQ58FF7 597 aa13.98□□□□□ -0.17
HMGCL-204ENST00000436439 HDGFL1Q5TGJ6 251 aa13.98□□□□□ -0.17
HMGCL-204ENST00000436439 TRMT112Q9UI30 125 aaKnown RBP13.98□□□□□ -0.17
HMGCL-204ENST00000436439 CNTNAP1P78357 1384 aa13.98□□□□□ -0.17
HMGCL-204ENST00000436439 TRPM7Q96QT4 1865 aa13.98□□□□□ -0.17
HMGCL-204ENST00000436439 PPIP5K2O43314 1243 aa13.97□□□□□ -0.17
HMGCL-204ENST00000436439 EPS15P42566 896 aa13.97□□□□□ -0.17
HMGCL-204ENST00000436439 GRIPAP1Q4V328 841 aa13.97□□□□□ -0.17
HMGCL-204ENST00000436439 PNMA8AQ86V59 439 aaPredicted RBP13.97□□□□□ -0.17
HMGCL-204ENST00000436439 TMEM88BA6NKF7 163 aa13.96□□□□□ -0.17
HMGCL-204ENST00000436439 NIM1KQ8IY84 436 aa13.96□□□□□ -0.17
HMGCL-204ENST00000436439 CNTROBQ8N137 903 aa13.96□□□□□ -0.17
HMGCL-204ENST00000436439 RTFDC1Q9BY42 306 aaPredicted RBP13.96□□□□□ -0.17
HMGCL-204ENST00000436439 SH3TC1Q8TE82 1336 aa13.96□□□□□ -0.17
HMGCL-204ENST00000436439 HOXB7P09629 217 aa13.96□□□□□ -0.18
HMGCL-204ENST00000436439 RARSP54136 660 aaKnown RBP13.96□□□□□ -0.18
HMGCL-204ENST00000436439 RRP1P56182 461 aaKnown RBP13.96□□□□□ -0.18
HMGCL-204ENST00000436439 FMR1Q06787 632 aaKnown RBP eCLIP13.96□□□□□ -0.18
HMGCL-204ENST00000436439 ALDH1L2Q3SY69 923 aa13.96□□□□□ -0.18
HMGCL-204ENST00000436439 ANKRD13DQ6ZTN6 518 aa13.96□□□□□ -0.18
HMGCL-204ENST00000436439 SP8Q8IXZ3 490 aa13.96□□□□□ -0.18
HMGCL-204ENST00000436439 PLBD2Q8NHP8 589 aa13.96□□□□□ -0.18
HMGCL-204ENST00000436439 ISCA1Q9BUE6 129 aa13.96□□□□□ -0.18
HMGCL-204ENST00000436439 ATP5J2-PTCD1G3V325 749 aa13.95□□□□□ -0.18
HMGCL-204ENST00000436439 VAMP4O75379 141 aa13.95□□□□□ -0.18
HMGCL-204ENST00000436439 BBOX1O75936 387 aa13.95□□□□□ -0.18
HMGCL-204ENST00000436439 VEGFBP49765 207 aa13.95□□□□□ -0.18
HMGCL-204ENST00000436439 BRPF1P55201 1214 aaPredicted RBP13.95□□□□□ -0.18
HMGCL-204ENST00000436439 GRAPQ13588 217 aa13.95□□□□□ -0.18
HMGCL-204ENST00000436439 GRAPLQ8TC17 118 aaPredicted RBP13.95□□□□□ -0.18
HMGCL-204ENST00000436439 FAM89AQ96GI7 184 aa13.95□□□□□ -0.18
HMGCL-204ENST00000436439 DBF4Q9UBU7 674 aaPredicted RBP13.95□□□□□ -0.18
HMGCL-204ENST00000436439 LMOD1P29536 600 aaPredicted RBP13.94□□□□□ -0.18
HMGCL-204ENST00000436439 CXCL9Q07325 125 aa13.94□□□□□ -0.18
HMGCL-204ENST00000436439 TWISTNBQ3B726 338 aaPredicted RBP13.94□□□□□ -0.18
HMGCL-204ENST00000436439 DPP8Q6V1X1 898 aaPredicted RBP13.94□□□□□ -0.18
HMGCL-204ENST00000436439 DDX46Q7L014 1031 aaKnown RBP13.94□□□□□ -0.18
HMGCL-204ENST00000436439 TNS4Q8IZW8 715 aa13.94□□□□□ -0.18
HMGCL-204ENST00000436439 MPNDQ8N594 471 aa13.94□□□□□ -0.18
HMGCL-204ENST00000436439 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.94□□□□□ -0.18
HMGCL-204ENST00000436439 VPS33BQ9H267 617 aa13.94□□□□□ -0.18
HMGCL-204ENST00000436439 RTL5Q5HYW3 569 aaPredicted RBP13.93□□□□□ -0.18
HMGCL-204ENST00000436439 TSPYL6Q8N831 410 aa13.93□□□□□ -0.18
HMGCL-204ENST00000436439 C8orf58Q8NAV2 365 aa13.93□□□□□ -0.18
HMGCL-204ENST00000436439 SUPT20HQ8NEM7 779 aa13.93□□□□□ -0.18
HMGCL-204ENST00000436439 TMX4Q9H1E5 349 aaPredicted RBP13.93□□□□□ -0.18
HMGCL-204ENST00000436439 PHAXQ9H814 394 aaKnown RBP13.93□□□□□ -0.18
HMGCL-204ENST00000436439 ZNRF3Q9ULT6 936 aa13.93□□□□□ -0.18
HMGCL-204ENST00000436439 ELL2O00472 640 aaPredicted RBP13.92□□□□□ -0.18
HMGCL-204ENST00000436439 FOXN1O15353 648 aa13.92□□□□□ -0.18
HMGCL-204ENST00000436439 KIAA2012Q0VF49 1180 aa13.92□□□□□ -0.18
HMGCL-204ENST00000436439 CELF1Q92879 486 aaKnown RBP13.92□□□□□ -0.18
HMGCL-204ENST00000436439 HYPKQ9NX55 129 aa13.92□□□□□ -0.18
HMGCL-204ENST00000436439 GPRC5DQ9NZD1 345 aa13.92□□□□□ -0.18
HMGCL-204ENST00000436439 THSD7BQ9C0I4 1608 aa13.91□□□□□ -0.18
HMGCL-204ENST00000436439 RASSF10A6NK89 507 aa13.91□□□□□ -0.18
HMGCL-204ENST00000436439 YDJCA8MPS7 323 aa13.91□□□□□ -0.18
HMGCL-204ENST00000436439 CAPN15O75808 1086 aa13.91□□□□□ -0.18
HMGCL-204ENST00000436439 BCAR3O75815 825 aa13.91□□□□□ -0.18
HMGCL-204ENST00000436439 USP50Q70EL3 339 aaPredicted RBP13.91□□□□□ -0.18
HMGCL-204ENST00000436439 TRAF5O00463 557 aa13.9□□□□□ -0.18
HMGCL-204ENST00000436439 RAD17O75943 681 aa13.9□□□□□ -0.18
HMGCL-204ENST00000436439 GMPSP49915 693 aaPredicted RBP13.9□□□□□ -0.18
HMGCL-204ENST00000436439 SF3B3Q15393 1217 aaKnown RBP13.9□□□□□ -0.18
HMGCL-204ENST00000436439 DEFB115Q30KQ5 88 aa13.9□□□□□ -0.18
HMGCL-204ENST00000436439 CIAPIN1Q6FI81 312 aa13.9□□□□□ -0.18
HMGCL-204ENST00000436439 CHMP4AQ9BY43 222 aa13.9□□□□□ -0.18
HMGCL-204ENST00000436439 ADARB2Q9NS39 739 aaKnown RBP13.9□□□□□ -0.18
HMGCL-204ENST00000436439 SCN9AQ15858 1988 aa13.89□□□□□ -0.19
HMGCL-204ENST00000436439 SHTN1A0MZ66 631 aa13.89□□□□□ -0.19
HMGCL-204ENST00000436439 TRIM28Q13263 835 aaKnown RBP13.89□□□□□ -0.19
HMGCL-204ENST00000436439 CST9Q5W186 159 aa13.89□□□□□ -0.19
HMGCL-204ENST00000436439 SSH1Q8WYL5 1049 aa13.89□□□□□ -0.19
HMGCL-204ENST00000436439 SPEF2Q9C093 1822 aa13.89□□□□□ -0.19
HMGCL-204ENST00000436439 KIF16BQ96L93 1317 aa13.88□□□□□ -0.19
HMGCL-204ENST00000436439 POLR2AP24928 1970 aaKnown RBP13.88□□□□□ -0.19
HMGCL-204ENST00000436439 IRS4O14654 1257 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-204ENST00000436439 HIRAP54198 1017 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-204ENST00000436439 TMC4Q7Z404 712 aa13.88□□□□□ -0.19
HMGCL-204ENST00000436439 RIC3Q7Z5B4 369 aa13.88□□□□□ -0.19
HMGCL-204ENST00000436439 SMC4Q9NTJ3 1288 aa13.88□□□□□ -0.19
HMGCL-204ENST00000436439 ABT1Q9ULW3 272 aaKnown RBP13.88□□□□□ -0.19
HMGCL-204ENST00000436439 MYH3P11055 1940 aa13.88□□□□□ -0.19
HMGCL-204ENST00000436439 WDR33Q9C0J8 1336 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms