RNA–Protein interactions for RNA: ENST00000435702.1

AP001046.1-201, humanhuman

TSL 2 BASIC

Gene AP001046.1, Length 2,816 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001046.1-201ENST00000435702 CACNA1FO60840 1977 aa16.14■□□□□ 0.17
AP001046.1-201ENST00000435702 SLC15A2Q16348 729 aa16.14■□□□□ 0.17
AP001046.1-201ENST00000435702 KIF6Q6ZMV9 814 aa16.14■□□□□ 0.17
AP001046.1-201ENST00000435702 PXDNLA1KZ92 1463 aa16.13■□□□□ 0.17
AP001046.1-201ENST00000435702 LRRC24Q50LG9 513 aa16.13■□□□□ 0.17
AP001046.1-201ENST00000435702 KIF2CQ99661 725 aa16.13■□□□□ 0.17
AP001046.1-201ENST00000435702 STK32BQ9NY57 414 aa16.13■□□□□ 0.17
AP001046.1-201ENST00000435702 CHMP5Q9NZZ3 219 aa16.13■□□□□ 0.17
AP001046.1-201ENST00000435702 SALL3Q9BXA9 1300 aa16.13■□□□□ 0.17
AP001046.1-201ENST00000435702 PHF14O94880 888 aa16.13■□□□□ 0.17
AP001046.1-201ENST00000435702 TIMM10P62072 90 aa16.13■□□□□ 0.17
AP001046.1-201ENST00000435702 CASC1Q6TDU7 716 aa16.13■□□□□ 0.17
AP001046.1-201ENST00000435702 BICDL1Q6ZP65 573 aa16.13■□□□□ 0.17
AP001046.1-201ENST00000435702 PI4K2BQ8TCG2 481 aa16.13■□□□□ 0.17
AP001046.1-201ENST00000435702 RAB11FIP3O75154 756 aa16.12■□□□□ 0.17
AP001046.1-201ENST00000435702 PTPN12Q05209 780 aaKnown RBP16.12■□□□□ 0.17
AP001046.1-201ENST00000435702 CCDC24Q8N4L8 307 aa16.12■□□□□ 0.17
AP001046.1-201ENST00000435702 LARP6Q9BRS8 491 aaKnown RBP16.12■□□□□ 0.17
AP001046.1-201ENST00000435702 TFCP2L1Q9NZI6 479 aa16.12■□□□□ 0.17
AP001046.1-201ENST00000435702 SSFA2P28290 1259 aa16.12■□□□□ 0.17
AP001046.1-201ENST00000435702 SLFNL1Q499Z3 407 aa16.12■□□□□ 0.17
AP001046.1-201ENST00000435702 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.11■□□□□ 0.17
AP001046.1-201ENST00000435702 ARHGEF1Q92888 912 aaKnown RBP16.11■□□□□ 0.17
AP001046.1-201ENST00000435702 USP26Q9BXU7 913 aa16.11■□□□□ 0.17
AP001046.1-201ENST00000435702 PANK2Q9BZ23 570 aa16.11■□□□□ 0.17
AP001046.1-201ENST00000435702 BCORQ6W2J9 1755 aa16.11■□□□□ 0.17
AP001046.1-201ENST00000435702 PNPLA7Q6ZV29 1317 aa16.11■□□□□ 0.17
AP001046.1-201ENST00000435702 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
AP001046.1-201ENST00000435702 HSP90AA1P07900 732 aaKnown RBP16.1■□□□□ 0.17
AP001046.1-201ENST00000435702 CHMLP26374 656 aa16.1■□□□□ 0.17
AP001046.1-201ENST00000435702 DNAJC2Q99543 621 aaKnown RBP16.1■□□□□ 0.17
AP001046.1-201ENST00000435702 SCN7AQ01118 1682 aa16.1■□□□□ 0.17
AP001046.1-201ENST00000435702 SOCS7O14512 581 aa16.1■□□□□ 0.17
AP001046.1-201ENST00000435702 RBM25P49756 843 aaKnown RBP16.1■□□□□ 0.17
AP001046.1-201ENST00000435702 FOXO4P98177 505 aa16.1■□□□□ 0.17
AP001046.1-201ENST00000435702 PALD1Q9ULE6 856 aa16.1■□□□□ 0.17
AP001046.1-201ENST00000435702 ADRA2BP18089 450 aa16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 TCIRG1Q13488 830 aa16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 TRAPPC3LQ5T215 181 aa16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 ARFGEF2Q9Y6D5 1785 aa16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 ERC2O15083 957 aa16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 TRAK2O60296 914 aa16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 CASP7P55210 303 aa16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 MTX1Q13505 466 aa16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 COL23A1Q86Y22 540 aaPredicted RBP16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 DBNDD2Q9BQY9 259 aa16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 OSBPL3Q9H4L5 887 aa16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 TRMT112Q9UI30 125 aaKnown RBP16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
AP001046.1-201ENST00000435702 H7C1W4 665 aa16.08■□□□□ 0.16
AP001046.1-201ENST00000435702 SNAP23O00161 211 aa16.08■□□□□ 0.16
AP001046.1-201ENST00000435702 CAMTA2O94983 1202 aa16.08■□□□□ 0.16
AP001046.1-201ENST00000435702 ESYT1Q9BSJ8 1104 aa16.08■□□□□ 0.16
AP001046.1-201ENST00000435702 UPF3BQ9BZI7 483 aaKnown RBP16.08■□□□□ 0.16
AP001046.1-201ENST00000435702 SRP68Q9UHB9 627 aaKnown RBP16.08■□□□□ 0.16
AP001046.1-201ENST00000435702 UTYO14607 1347 aa16.08■□□□□ 0.16
AP001046.1-201ENST00000435702 MAP3K15Q6ZN16 1313 aa16.08■□□□□ 0.16
AP001046.1-201ENST00000435702 RFX5P48382 616 aaPredicted RBP16.08■□□□□ 0.16
AP001046.1-201ENST00000435702 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.16
AP001046.1-201ENST00000435702 ECHDC1Q9NTX5 307 aa16.08■□□□□ 0.16
AP001046.1-201ENST00000435702 XRCC6P12956 609 aaKnown RBP eCLIP16.07■□□□□ 0.16
AP001046.1-201ENST00000435702 NARFQ9UHQ1 456 aa16.07■□□□□ 0.16
AP001046.1-201ENST00000435702 USP42Q9H9J4 1324 aaKnown RBP16.07■□□□□ 0.16
AP001046.1-201ENST00000435702 RFC4P35249 363 aa16.07■□□□□ 0.16
AP001046.1-201ENST00000435702 HELBQ8NG08 1087 aaPredicted RBP16.07■□□□□ 0.16
AP001046.1-201ENST00000435702 FAM227BQ96M60 508 aa16.07■□□□□ 0.16
AP001046.1-201ENST00000435702 STAP2Q9UGK3 403 aa16.07■□□□□ 0.16
AP001046.1-201ENST00000435702 UTRNP46939 3433 aa16.07■□□□□ 0.16
AP001046.1-201ENST00000435702 SRCAPQ6ZRS2 3230 aa16.07■□□□□ 0.16
AP001046.1-201ENST00000435702 FLAD1Q8NFF5 587 aa16.06■□□□□ 0.16
AP001046.1-201ENST00000435702 BCL2L12Q9HB09 334 aa16.06■□□□□ 0.16
AP001046.1-201ENST00000435702 SNRKQ9NRH2 765 aa16.06■□□□□ 0.16
AP001046.1-201ENST00000435702 DBNLQ9UJU6 430 aaKnown RBP16.06■□□□□ 0.16
AP001046.1-201ENST00000435702 CPA1P15085 419 aa16.06■□□□□ 0.16
AP001046.1-201ENST00000435702 USPL1Q5W0Q7 1092 aa16.06■□□□□ 0.16
AP001046.1-201ENST00000435702 CCDC191Q8NCU4 936 aa16.06■□□□□ 0.16
AP001046.1-201ENST00000435702 TNPO1Q92973 898 aaKnown RBP16.06■□□□□ 0.16
AP001046.1-201ENST00000435702 PDGFDQ9GZP0 370 aaPredicted RBP16.06■□□□□ 0.16
AP001046.1-201ENST00000435702 CASZ1Q86V15 1759 aa16.05■□□□□ 0.16
AP001046.1-201ENST00000435702 DDX46Q7L014 1031 aaKnown RBP16.05■□□□□ 0.16
AP001046.1-201ENST00000435702 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
AP001046.1-201ENST00000435702 CNTROBQ8N137 903 aa16.05■□□□□ 0.16
AP001046.1-201ENST00000435702 HDAC5Q9UQL6 1122 aa16.05■□□□□ 0.16
AP001046.1-201ENST00000435702 NUP98P52948 1817 aa16.05■□□□□ 0.16
AP001046.1-201ENST00000435702 R3HDM1Q15032 1099 aaKnown RBP16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 CCDC57Q2TAC2 916 aa16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 GIGYF2Q6Y7W6 1299 aaKnown RBP16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 GREM2Q9H772 168 aa16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 GOLGA6L3A6NEY3 463 aa16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 ZPR1O75312 459 aa16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 TNNI3KQ59H18 835 aa16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 FOXD4L5Q5VV16 416 aaPredicted RBP16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 NLRP10Q86W26 655 aa16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 FOXD4L4Q8WXT5 416 aaPredicted RBP16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 FSD1Q9BTV5 496 aa16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 DIAPH3Q9NSV4 1193 aa16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 FPGT-TNNI3KV9GXZ4 949 aa16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 ANKRD36CQ5JPF3 1778 aa16.04■□□□□ 0.16
AP001046.1-201ENST00000435702 DDIT3P35638 169 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms