RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 TTC12Q9H892 705 aaPredicted RBP12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 PI4KAP2A4QPH2 592 aa12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 PHACTR2O75167 634 aa12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 MRPS9P82933 396 aaKnown RBP12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 IFI16Q16666 785 aaKnown RBP12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 PI4KAP1Q8N8J0 262 aa12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 SMARCC2Q8TAQ2 1214 aa12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 DDX12PQ92771 950 aa12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 EIF4G3O43432 1585 aaKnown RBP12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 IFFO1Q0D2I5 559 aa12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 RARSP54136 660 aaKnown RBP12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 FERMT3Q86UX7 667 aa12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 NAA15Q9BXJ9 866 aaKnown RBP12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 C6orf50Q9HD87 102 aa12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 MICU3Q86XE3 530 aa12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 CCDC144CPQ8IYA2 1237 aa12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 CCDC113Q9H0I3 377 aa12.22□□□□□ -0.45
LDLRAD4-204ENST00000435606 ATP2B3Q16720 1220 aa12.21□□□□□ -0.45
LDLRAD4-204ENST00000435606 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.45
LDLRAD4-204ENST00000435606 SIRT1Q96EB6 747 aa12.21□□□□□ -0.45
LDLRAD4-204ENST00000435606 ZNF354CQ86Y25 554 aa12.21□□□□□ -0.45
LDLRAD4-204ENST00000435606 CDCA7Q9BWT1 371 aaPredicted RBP12.21□□□□□ -0.45
LDLRAD4-204ENST00000435606 PLVAPQ9BX97 442 aa12.21□□□□□ -0.45
LDLRAD4-204ENST00000435606 SLC4A4Q9Y6R1 1079 aa12.21□□□□□ -0.45
LDLRAD4-204ENST00000435606 AKAP4Q5JQC9 854 aa12.21□□□□□ -0.45
LDLRAD4-204ENST00000435606 IMPG2Q9BZV3 1241 aa12.21□□□□□ -0.45
LDLRAD4-204ENST00000435606 GNAT2P19087 354 aa12.21□□□□□ -0.45
LDLRAD4-204ENST00000435606 DZIP3Q86Y13 1208 aaKnown RBP12.21□□□□□ -0.45
LDLRAD4-204ENST00000435606 SNRKQ9NRH2 765 aa12.21□□□□□ -0.45
LDLRAD4-204ENST00000435606 KRT13P13646 458 aa12.21□□□□□ -0.46
LDLRAD4-204ENST00000435606 CCDC102AQ96A19 550 aa12.21□□□□□ -0.46
LDLRAD4-204ENST00000435606 SPDYE3A6NKU9 549 aa12.21□□□□□ -0.46
LDLRAD4-204ENST00000435606 FERP16591 822 aa12.21□□□□□ -0.46
LDLRAD4-204ENST00000435606 NEK1Q96PY6 1258 aa12.21□□□□□ -0.46
LDLRAD4-204ENST00000435606 SH2D4AQ9H788 454 aa12.21□□□□□ -0.46
LDLRAD4-204ENST00000435606 TAF12Q16514 161 aa12.2□□□□□ -0.46
LDLRAD4-204ENST00000435606 C19orf44Q9H6X5 657 aa12.2□□□□□ -0.46
LDLRAD4-204ENST00000435606 SREK1Q8WXA9 508 aaKnown RBP12.2□□□□□ -0.46
LDLRAD4-204ENST00000435606 PPIP5K1Q6PFW1 1433 aa12.2□□□□□ -0.46
LDLRAD4-204ENST00000435606 TRAPPC3LQ5T215 181 aa12.2□□□□□ -0.46
LDLRAD4-204ENST00000435606 PPM1EQ8WY54 764 aa12.2□□□□□ -0.46
LDLRAD4-204ENST00000435606 RBM26Q5T8P6 1007 aaKnown RBP12.2□□□□□ -0.46
LDLRAD4-204ENST00000435606 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
LDLRAD4-204ENST00000435606 IL16Q14005 1332 aa12.2□□□□□ -0.46
LDLRAD4-204ENST00000435606 DUOX2Q9NRD8 1548 aa12.2□□□□□ -0.46
LDLRAD4-204ENST00000435606 MAGEB6P1A0A0J9YX57 407 aa12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 HOOK2Q96ED9 719 aa12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 HEATR3Q7Z4Q2 680 aa12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 ZNF518AQ6AHZ1 1483 aa12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 RIMS2Q9UQ26 1411 aa12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 CCDC117Q8IWD4 279 aaPredicted RBP12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 FSIP1Q8NA03 581 aa12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 UBXN4Q92575 508 aa12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 PSMD1Q99460 953 aa12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 IL15P40933 162 aaPredicted RBP12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 PICK1Q9NRD5 415 aa12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
LDLRAD4-204ENST00000435606 HAND2P61296 217 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 BRDTQ58F21 947 aaPredicted RBP12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 XAGE3Q8WTP9 111 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 PCDH11XQ9BZA7 1347 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 PCDH11YQ9BZA8 1340 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 CALM1P0DP23 149 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 CALM2P0DP24 149 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 CALM3P0DP25 149 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 TNNT1P13805 278 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 GRPEL1Q9HAV7 217 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 TMCO5BA8MYB1 307 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 RAPGEF6Q8TEU7 1601 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 ZBTB43O43298 467 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 RRP36Q96EU6 259 aaKnown RBP12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 BACH2Q9BYV9 841 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 FSD2A1L4K1 749 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 RTN1Q16799 776 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 KIF4BQ2VIQ3 1234 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 DDX19AQ9NUU7 478 aaKnown RBP12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 NOP2P46087 812 aaKnown RBP12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 SMC1AQ14683 1233 aaKnown RBP12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 CHPF2Q9P2E5 772 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 IKBKGQ9Y6K9 419 aa12.18□□□□□ -0.46
LDLRAD4-204ENST00000435606 NAPAP54920 295 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 RTL9Q8NET4 1388 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 RALGAPBQ86X10 1494 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 STAT6P42226 847 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 WDR97A6NE52 1622 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 STX1AQ16623 288 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 ASXL2Q76L83 1435 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 TMOD4Q9NZQ9 345 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 TCHPQ9BT92 498 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 ZSCAN16Q9H4T2 348 aaPredicted RBP12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 URB2Q14146 1524 aaKnown RBP12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 GRM8O00222 908 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 RBM25P49756 843 aaKnown RBP12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 MSANTD4Q8NCY6 345 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 A2MP01023 1474 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 LDHBP07195 334 aaKnown RBP12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 WDR70Q9NW82 654 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms