RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 SQSTM1Q13501 440 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 RAB33AQ14088 237 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 DALRD3Q5D0E6 543 aaKnown RBP7.5□□□□□ -1.21
VRK2-206ENST00000435505 NBPF6Q5VWK0 638 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 NBPF4Q96M43 638 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 SLC27A5Q9Y2P5 690 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 LEMD3Q9Y2U8 911 aa7.5□□□□□ -1.21
VRK2-206ENST00000435505 HFM1A2PYH4 1435 aa7.49□□□□□ -1.21
VRK2-206ENST00000435505 CBX1P83916 185 aa7.49□□□□□ -1.21
VRK2-206ENST00000435505 ALG1LQ6GMV1 187 aa7.49□□□□□ -1.21
VRK2-206ENST00000435505 CHMP7Q8WUX9 453 aaPredicted RBP7.49□□□□□ -1.21
VRK2-206ENST00000435505 PPP1R9BQ96SB3 815 aa7.49□□□□□ -1.21
VRK2-206ENST00000435505 TRIM55Q9BYV6 548 aa7.49□□□□□ -1.21
VRK2-206ENST00000435505 CGNQ9P2M7 1197 aaKnown RBP7.49□□□□□ -1.21
VRK2-206ENST00000435505 HECW1Q76N89 1606 aa7.49□□□□□ -1.21
VRK2-206ENST00000435505 DENND4BO75064 1496 aaPredicted RBP7.49□□□□□ -1.21
VRK2-206ENST00000435505 SCG3Q8WXD2 468 aaKnown RBP7.49□□□□□ -1.21
VRK2-206ENST00000435505 QTRT2Q9H974 415 aaKnown RBP7.49□□□□□ -1.21
VRK2-206ENST00000435505 ATP6V1AP38606 617 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 CHRDL2Q6WN34 429 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 COLQQ9Y215 455 aaPredicted RBP7.48□□□□□ -1.21
VRK2-206ENST00000435505 COMMD10Q9Y6G5 202 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 CFHP08603 1231 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 VIL1P09327 827 aaKnown RBP7.48□□□□□ -1.21
VRK2-206ENST00000435505 PLCG2P16885 1265 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 C21orf62-AS1Q17RA5 79 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 TTC39BQ5VTQ0 682 aaPredicted RBP7.48□□□□□ -1.21
VRK2-206ENST00000435505 BLOC1S3Q6QNY0 202 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 CELF2-AS1Q8N7Q2 184 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 APPBP2Q92624 585 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 COL26A1Q96A83 441 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 OSBPL7Q9BZF2 842 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 SIRPGQ9P1W8 387 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 POLIQ9UNA4 740 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 PTPRKQ15262 1439 aa7.48□□□□□ -1.21
VRK2-206ENST00000435505 PCF11O94913 1555 aaKnown RBP7.47□□□□□ -1.21
VRK2-206ENST00000435505 CTHP32929 405 aa7.47□□□□□ -1.21
VRK2-206ENST00000435505 DNTTIP2Q5QJE6 756 aaKnown RBP7.47□□□□□ -1.21
VRK2-206ENST00000435505 COX20Q5RI15 118 aa7.47□□□□□ -1.21
VRK2-206ENST00000435505 C10orf62Q5T681 223 aaPredicted RBP7.47□□□□□ -1.21
VRK2-206ENST00000435505 C16orf46Q6P387 395 aa7.47□□□□□ -1.21
VRK2-206ENST00000435505 PANK3Q9H999 370 aa7.47□□□□□ -1.21
VRK2-206ENST00000435505 MAP3K20Q9NYL2 800 aaKnown RBP7.47□□□□□ -1.21
VRK2-206ENST00000435505 CTTNBP2Q8WZ74 1663 aa7.47□□□□□ -1.21
VRK2-206ENST00000435505 OS9Q13438 667 aaPredicted RBP7.47□□□□□ -1.21
VRK2-206ENST00000435505 ATP2B3Q16720 1220 aa7.47□□□□□ -1.21
VRK2-206ENST00000435505 SASS6Q6UVJ0 657 aa7.47□□□□□ -1.21
VRK2-206ENST00000435505 JARID2Q92833 1246 aaPredicted RBP7.47□□□□□ -1.21
VRK2-206ENST00000435505 APBA2Q99767 749 aa7.47□□□□□ -1.21
VRK2-206ENST00000435505 BSDC1Q9NW68 430 aaPredicted RBP7.47□□□□□ -1.21
VRK2-206ENST00000435505 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.47□□□□□ -1.21
VRK2-206ENST00000435505 EFR3BQ9Y2G0 817 aa7.47□□□□□ -1.21
VRK2-206ENST00000435505 NAIPQ13075 1403 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 ZNF500O60304 480 aaPredicted RBP7.46□□□□□ -1.22
VRK2-206ENST00000435505 IRX3P78415 501 aaPredicted RBP7.46□□□□□ -1.22
VRK2-206ENST00000435505 PODNQ7Z5L7 613 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 C14orf80Q86SX3 495 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 PIP4P2Q8N4L2 257 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 RASGRP4Q8TDF6 673 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 KBTBD4Q9NVX7 518 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 FBXO9Q9UK97 447 aaPredicted RBP7.46□□□□□ -1.22
VRK2-206ENST00000435505 LRFN2Q9ULH4 789 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 TSPAN6O43657 245 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 NR1I2O75469 434 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 PTK2Q05397 1052 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 NFX1Q12986 1120 aaKnown RBP7.46□□□□□ -1.22
VRK2-206ENST00000435505 NFE2Q16621 373 aaPredicted RBP7.46□□□□□ -1.22
VRK2-206ENST00000435505 TAF3Q5VWG9 929 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 PACS2Q86VP3 889 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 TNS4Q8IZW8 715 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 SCYL1Q96KG9 808 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 CEP89Q96ST8 783 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 CHMP5Q9NZZ3 219 aa7.46□□□□□ -1.22
VRK2-206ENST00000435505 BRD4O60885 1362 aaPredicted RBP7.45□□□□□ -1.22
VRK2-206ENST00000435505 TOP2BQ02880 1626 aa7.45□□□□□ -1.22
VRK2-206ENST00000435505 HMGB1P1B2RPK0 211 aaPredicted RBP7.45□□□□□ -1.22
VRK2-206ENST00000435505 IRS1P35568 1242 aa7.45□□□□□ -1.22
VRK2-206ENST00000435505 SAFB2Q14151 953 aaKnown RBP eCLIP7.45□□□□□ -1.22
VRK2-206ENST00000435505 NBPF8Q3BBV2 869 aa7.45□□□□□ -1.22
VRK2-206ENST00000435505 ARNT2Q9HBZ2 717 aa7.45□□□□□ -1.22
VRK2-206ENST00000435505 ZNF358Q9NW07 568 aa7.45□□□□□ -1.22
VRK2-206ENST00000435505 GEMIN8Q9NWZ8 242 aaKnown RBP7.45□□□□□ -1.22
VRK2-206ENST00000435505 ATP8A1Q9Y2Q0 1164 aa7.45□□□□□ -1.22
VRK2-206ENST00000435505 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.45□□□□□ -1.22
VRK2-206ENST00000435505 TEX14Q8IWB6 1497 aa7.45□□□□□ -1.22
VRK2-206ENST00000435505 CUX1P39880 1505 aa7.45□□□□□ -1.22
VRK2-206ENST00000435505 A0A1W2PRU2 124 aa7.44□□□□□ -1.22
VRK2-206ENST00000435505 ALDH1L1O75891 902 aa7.44□□□□□ -1.22
VRK2-206ENST00000435505 EXOSC10Q01780 885 aaKnown RBP7.44□□□□□ -1.22
VRK2-206ENST00000435505 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.44□□□□□ -1.22
VRK2-206ENST00000435505 GRIPAP1Q4V328 841 aa7.44□□□□□ -1.22
VRK2-206ENST00000435505 ERMP1Q7Z2K6 904 aa7.44□□□□□ -1.22
VRK2-206ENST00000435505 GJD3Q8N144 294 aa7.44□□□□□ -1.22
VRK2-206ENST00000435505 L3MBTL2Q969R5 705 aa7.44□□□□□ -1.22
VRK2-206ENST00000435505 TBC1D32Q96NH3 1257 aa7.44□□□□□ -1.22
VRK2-206ENST00000435505 TSPAN10Q9H1Z9 355 aaPredicted RBP7.44□□□□□ -1.22
VRK2-206ENST00000435505 GINM1Q9NU53 330 aa7.44□□□□□ -1.22
VRK2-206ENST00000435505 STIM2Q9P246 746 aa7.44□□□□□ -1.22
VRK2-206ENST00000435505 ROCK2O75116 1388 aaKnown RBP7.44□□□□□ -1.22
VRK2-206ENST00000435505 USP31Q70CQ4 1352 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms