RNA–Protein interactions for RNA: ENST00000434054.6

CLCN2-204, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCN2, Length 2,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-204ENST00000434054 FBXW7Q969H0 707 aa20.46■□□□□ 0.87
CLCN2-204ENST00000434054 CSB-PGBD3P0DP91 1061 aa20.45■□□□□ 0.86
CLCN2-204ENST00000434054 HSP90AB4PQ58FF6 505 aa20.45■□□□□ 0.86
CLCN2-204ENST00000434054 BLOC1S2Q6QNY1 142 aa20.45■□□□□ 0.86
CLCN2-204ENST00000434054 ZNF589Q86UQ0 364 aaPredicted RBP20.45■□□□□ 0.86
CLCN2-204ENST00000434054 LRRC2Q9BYS8 371 aa20.45■□□□□ 0.86
CLCN2-204ENST00000434054 TNNT1P13805 278 aa20.45■□□□□ 0.86
CLCN2-204ENST00000434054 ZNF165P49910 485 aa20.45■□□□□ 0.86
CLCN2-204ENST00000434054 CCDC144BQ3MJ40 725 aa20.45■□□□□ 0.86
CLCN2-204ENST00000434054 CCDC144CPQ8IYA2 1237 aa20.45■□□□□ 0.86
CLCN2-204ENST00000434054 FSD1Q9BTV5 496 aa20.45■□□□□ 0.86
CLCN2-204ENST00000434054 ADCY9O60503 1353 aa20.45■□□□□ 0.86
CLCN2-204ENST00000434054 NCBP1Q09161 790 aaKnown RBP20.44■□□□□ 0.86
CLCN2-204ENST00000434054 LEO1Q8WVC0 666 aaPredicted RBP20.44■□□□□ 0.86
CLCN2-204ENST00000434054 EVI5LQ96CN4 794 aa20.44■□□□□ 0.86
CLCN2-204ENST00000434054 PGBD1Q96JS3 809 aa20.44■□□□□ 0.86
CLCN2-204ENST00000434054 ZSCAN25Q6NSZ9 544 aa20.44■□□□□ 0.86
CLCN2-204ENST00000434054 CACTINQ8WUQ7 758 aaKnown RBP20.44■□□□□ 0.86
CLCN2-204ENST00000434054 ERCC4Q92889 916 aaPredicted RBP20.44■□□□□ 0.86
CLCN2-204ENST00000434054 MAP4K1Q92918 833 aa20.44■□□□□ 0.86
CLCN2-204ENST00000434054 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLCN2-204ENST00000434054 CCDC9Q9Y3X0 531 aaKnown RBP20.44■□□□□ 0.86
CLCN2-204ENST00000434054 V9GYY5 206 aaPredicted RBP20.44■□□□□ 0.86
CLCN2-204ENST00000434054 SASH1O94885 1247 aa20.44■□□□□ 0.86
CLCN2-204ENST00000434054 TM6SF1Q9BZW5 370 aa20.44■□□□□ 0.86
CLCN2-204ENST00000434054 FTOQ9C0B1 505 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLCN2-204ENST00000434054 NLRP2Q9NX02 1062 aa20.44■□□□□ 0.86
CLCN2-204ENST00000434054 BTBD11A6QL63 1104 aa20.43■□□□□ 0.86
CLCN2-204ENST00000434054 TOB2Q14106 344 aaPredicted RBP20.43■□□□□ 0.86
CLCN2-204ENST00000434054 ANKRD7Q92527 254 aa20.43■□□□□ 0.86
CLCN2-204ENST00000434054 DCCP43146 1447 aa20.43■□□□□ 0.86
CLCN2-204ENST00000434054 GPATCH3Q96I76 525 aa20.43■□□□□ 0.86
CLCN2-204ENST00000434054 CLIP2Q9UDT6 1046 aa20.43■□□□□ 0.86
CLCN2-204ENST00000434054 ZNF75DP51815 510 aa20.42■□□□□ 0.86
CLCN2-204ENST00000434054 TEFQ10587 303 aa20.42■□□□□ 0.86
CLCN2-204ENST00000434054 MARF1Q9Y4F3 1742 aaKnown RBP20.42■□□□□ 0.86
CLCN2-204ENST00000434054 TPD52L1Q16890 204 aaPredicted RBP20.42■□□□□ 0.86
CLCN2-204ENST00000434054 CTIFO43310 598 aaKnown RBP20.41■□□□□ 0.86
CLCN2-204ENST00000434054 TPM3P06753 285 aa20.41■□□□□ 0.86
CLCN2-204ENST00000434054 USP27XA6NNY8 438 aa20.41■□□□□ 0.86
CLCN2-204ENST00000434054 SUCLG2Q96I99 432 aa20.4■□□□□ 0.86
CLCN2-204ENST00000434054 BICC1Q9H694 974 aaKnown RBP20.4■□□□□ 0.86
CLCN2-204ENST00000434054 SPATA31A3Q5VYP0 1347 aa20.4■□□□□ 0.86
CLCN2-204ENST00000434054 NFAT5O94916 1531 aa20.4■□□□□ 0.86
CLCN2-204ENST00000434054 USP42Q9H9J4 1324 aaKnown RBP20.4■□□□□ 0.86
CLCN2-204ENST00000434054 UTP14CQ5TAP6 766 aaKnown RBP20.4■□□□□ 0.86
CLCN2-204ENST00000434054 CCDC129Q6ZRS4 1044 aa20.4■□□□□ 0.86
CLCN2-204ENST00000434054 SCAND2PQ9GZW5 306 aaPredicted RBP20.4■□□□□ 0.86
CLCN2-204ENST00000434054 RPS6KB1P23443 525 aa20.39■□□□□ 0.85
CLCN2-204ENST00000434054 BRF1Q92994 677 aa20.39■□□□□ 0.85
CLCN2-204ENST00000434054 TRMT1Q9NXH9 659 aaKnown RBP20.39■□□□□ 0.85
CLCN2-204ENST00000434054 PXDNLA1KZ92 1463 aa20.39■□□□□ 0.85
CLCN2-204ENST00000434054 PDCP20941 246 aa20.39■□□□□ 0.85
CLCN2-204ENST00000434054 PSMA5P28066 241 aa20.39■□□□□ 0.85
CLCN2-204ENST00000434054 G3BP1Q13283 466 aaKnown RBP eCLIP20.39■□□□□ 0.85
CLCN2-204ENST00000434054 FILIP1Q7Z7B0 1213 aa20.39■□□□□ 0.85
CLCN2-204ENST00000434054 KCNB2Q92953 911 aa20.39■□□□□ 0.85
CLCN2-204ENST00000434054 KAZALD1Q96I82 304 aa20.39■□□□□ 0.85
CLCN2-204ENST00000434054 CLSTN2Q9H4D0 955 aa20.39■□□□□ 0.85
CLCN2-204ENST00000434054 NPHP1O15259 732 aa20.38■□□□□ 0.85
CLCN2-204ENST00000434054 HSP90B1P14625 803 aaKnown RBP20.38■□□□□ 0.85
CLCN2-204ENST00000434054 PLA2G4DQ86XP0 818 aa20.38■□□□□ 0.85
CLCN2-204ENST00000434054 SEC62Q99442 399 aaKnown RBP20.38■□□□□ 0.85
CLCN2-204ENST00000434054 LTN1O94822 1766 aa20.38■□□□□ 0.85
CLCN2-204ENST00000434054 C11orf57Q6ZUT1 292 aaPredicted RBP20.38■□□□□ 0.85
CLCN2-204ENST00000434054 USP16Q9Y5T5 823 aa20.38■□□□□ 0.85
CLCN2-204ENST00000434054 XIRP1Q702N8 1843 aaKnown RBP20.38■□□□□ 0.85
CLCN2-204ENST00000434054 SYTL4Q96C24 671 aaPredicted RBP20.37■□□□□ 0.85
CLCN2-204ENST00000434054 PRDM11Q9NQV5 511 aa20.37■□□□□ 0.85
CLCN2-204ENST00000434054 ELP1O95163 1332 aa20.37■□□□□ 0.85
CLCN2-204ENST00000434054 TNS3Q68CZ2 1445 aa20.37■□□□□ 0.85
CLCN2-204ENST00000434054 H3BQV1 296 aa20.37■□□□□ 0.85
CLCN2-204ENST00000434054 PIP4K2BP78356 416 aa20.37■□□□□ 0.85
CLCN2-204ENST00000434054 IFFO2Q5TF58 517 aa20.37■□□□□ 0.85
CLCN2-204ENST00000434054 ZNF530Q6P9A1 599 aaPredicted RBP20.37■□□□□ 0.85
CLCN2-204ENST00000434054 A0A0U1RQG5 324 aaPredicted RBP20.36■□□□□ 0.85
CLCN2-204ENST00000434054 CCDC112Q8NEF3 446 aa20.36■□□□□ 0.85
CLCN2-204ENST00000434054 SLFNL1Q499Z3 407 aa20.36■□□□□ 0.85
CLCN2-204ENST00000434054 DDX19AQ9NUU7 478 aaKnown RBP20.36■□□□□ 0.85
CLCN2-204ENST00000434054 DBF4Q9UBU7 674 aaPredicted RBP20.36■□□□□ 0.85
CLCN2-204ENST00000434054 KIF1AQ12756 1690 aa20.36■□□□□ 0.85
CLCN2-204ENST00000434054 RNF20Q5VTR2 975 aa20.36■□□□□ 0.85
CLCN2-204ENST00000434054 NAP1L2Q9ULW6 460 aaPredicted RBP20.36■□□□□ 0.85
CLCN2-204ENST00000434054 GUCY1B3Q02153 619 aa20.35■□□□□ 0.85
CLCN2-204ENST00000434054 MTX1Q13505 466 aa20.35■□□□□ 0.85
CLCN2-204ENST00000434054 TDRD7Q8NHU6 1098 aaKnown RBP20.35■□□□□ 0.85
CLCN2-204ENST00000434054 PIP4K2AP48426 406 aaPredicted RBP20.34■□□□□ 0.85
CLCN2-204ENST00000434054 FGD1P98174 961 aa20.34■□□□□ 0.85
CLCN2-204ENST00000434054 CACNA1FO60840 1977 aa20.34■□□□□ 0.85
CLCN2-204ENST00000434054 SMTNL1A8MU46 457 aa20.34■□□□□ 0.85
CLCN2-204ENST00000434054 GOLGA6L19H0YKK7 550 aa20.34■□□□□ 0.85
CLCN2-204ENST00000434054 Q6ZUG5 572 aa20.34■□□□□ 0.85
CLCN2-204ENST00000434054 GTPBP4Q9BZE4 634 aaKnown RBP20.34■□□□□ 0.85
CLCN2-204ENST00000434054 STRN4Q9NRL3 753 aa20.34■□□□□ 0.85
CLCN2-204ENST00000434054 MED1Q15648 1581 aaPredicted RBP20.34■□□□□ 0.85
CLCN2-204ENST00000434054 TRPM3Q9HCF6 1732 aaPredicted RBP20.34■□□□□ 0.85
CLCN2-204ENST00000434054 KSR2Q6VAB6 950 aa20.33■□□□□ 0.85
CLCN2-204ENST00000434054 ERC1Q8IUD2 1116 aa20.33■□□□□ 0.85
CLCN2-204ENST00000434054 GRM8O00222 908 aa20.33■□□□□ 0.84
CLCN2-204ENST00000434054 CEP135Q66GS9 1140 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms