RNA–Protein interactions for RNA: ENST00000432343.1

ARPC1B-208, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 839 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-208ENST00000432343 CRY2Q49AN0 593 aa17.28■□□□□ 0.36
ARPC1B-208ENST00000432343 STYK1Q6J9G0 422 aa17.28■□□□□ 0.36
ARPC1B-208ENST00000432343 RBM17Q96I25 401 aaKnown RBP17.28■□□□□ 0.36
ARPC1B-208ENST00000432343 MEIS3Q99687 375 aa17.28■□□□□ 0.36
ARPC1B-208ENST00000432343 PDZRN3Q9UPQ7 1066 aa17.28■□□□□ 0.36
ARPC1B-208ENST00000432343 KLRG2A4D1S0 409 aaPredicted RBP17.27■□□□□ 0.36
ARPC1B-208ENST00000432343 UBTFL1P0CB47 393 aaPredicted RBP17.27■□□□□ 0.36
ARPC1B-208ENST00000432343 YBX3P16989 372 aaKnown RBP eCLIP17.27■□□□□ 0.363e-9■■■■□ 22.7
ARPC1B-208ENST00000432343 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
ARPC1B-208ENST00000432343 DALRD3Q5D0E6 543 aaKnown RBP17.27■□□□□ 0.36
ARPC1B-208ENST00000432343 EPHA10Q5JZY3 1008 aa17.27■□□□□ 0.36
ARPC1B-208ENST00000432343 TTLL6Q8N841 843 aa17.27■□□□□ 0.36
ARPC1B-208ENST00000432343 COG6Q9Y2V7 657 aa17.27■□□□□ 0.36
ARPC1B-208ENST00000432343 CCDC152Q4G0S7 254 aa17.26■□□□□ 0.35
ARPC1B-208ENST00000432343 PRPF40BQ6NWY9 871 aaKnown RBP17.26■□□□□ 0.35
ARPC1B-208ENST00000432343 DDX46Q7L014 1031 aaKnown RBP17.26■□□□□ 0.35
ARPC1B-208ENST00000432343 SLC51AQ86UW1 340 aa17.26■□□□□ 0.35
ARPC1B-208ENST00000432343 CNKSR1Q969H4 720 aa17.26■□□□□ 0.35
ARPC1B-208ENST00000432343 SEC31BQ9NQW1 1179 aa17.26■□□□□ 0.35
ARPC1B-208ENST00000432343 UTYO14607 1347 aa17.25■□□□□ 0.35
ARPC1B-208ENST00000432343 CCDC88AQ3V6T2 1871 aa17.25■□□□□ 0.35
ARPC1B-208ENST00000432343 MS4A1P11836 297 aa17.25■□□□□ 0.35
ARPC1B-208ENST00000432343 FOXO4P98177 505 aa17.25■□□□□ 0.35
ARPC1B-208ENST00000432343 SF3B3Q15393 1217 aaKnown RBP17.25■□□□□ 0.35
ARPC1B-208ENST00000432343 TTLL11Q8NHH1 800 aa17.25■□□□□ 0.35
ARPC1B-208ENST00000432343 BICC1Q9H694 974 aaKnown RBP17.25■□□□□ 0.35
ARPC1B-208ENST00000432343 GREM2Q9H772 168 aa17.25■□□□□ 0.35
ARPC1B-208ENST00000432343 SUPT16HQ9Y5B9 1047 aaKnown RBP17.25■□□□□ 0.35
ARPC1B-208ENST00000432343 C21orf2O43822 256 aa17.24■□□□□ 0.35
ARPC1B-208ENST00000432343 ALDH1B1P30837 517 aa17.24■□□□□ 0.35
ARPC1B-208ENST00000432343 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
ARPC1B-208ENST00000432343 LMBR1LQ6UX01 489 aa17.24■□□□□ 0.35
ARPC1B-208ENST00000432343 OLFM4Q6UX06 510 aa17.24■□□□□ 0.35
ARPC1B-208ENST00000432343 KAZALD1Q96I82 304 aa17.24■□□□□ 0.35
ARPC1B-208ENST00000432343 PLA2G12BQ9BX93 195 aa17.24■□□□□ 0.35
ARPC1B-208ENST00000432343 LRRFIP2Q9Y608 721 aaKnown RBP17.24■□□□□ 0.35
ARPC1B-208ENST00000432343 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
ARPC1B-208ENST00000432343 PPEF1O14829 653 aaPredicted RBP17.23■□□□□ 0.35
ARPC1B-208ENST00000432343 HOXA10P31260 410 aaPredicted RBP17.23■□□□□ 0.35
ARPC1B-208ENST00000432343 CELF1Q92879 486 aaKnown RBP17.23■□□□□ 0.35
ARPC1B-208ENST00000432343 CRAMP1Q96RY5 1269 aa17.23■□□□□ 0.35
ARPC1B-208ENST00000432343 C1orf115Q9H7X2 142 aa17.23■□□□□ 0.35
ARPC1B-208ENST00000432343 GNAI3P08754 354 aa17.22■□□□□ 0.35
ARPC1B-208ENST00000432343 GRAPQ13588 217 aa17.22■□□□□ 0.35
ARPC1B-208ENST00000432343 MVPQ14764 893 aaKnown RBP17.22■□□□□ 0.35
ARPC1B-208ENST00000432343 GRAPLQ8TC17 118 aaPredicted RBP17.22■□□□□ 0.35
ARPC1B-208ENST00000432343 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
ARPC1B-208ENST00000432343 ITGA6P23229 1130 aa17.21■□□□□ 0.35
ARPC1B-208ENST00000432343 ANKRD44Q8N8A2 993 aa17.21■□□□□ 0.35
ARPC1B-208ENST00000432343 CSF1RP07333 972 aa17.2■□□□□ 0.34
ARPC1B-208ENST00000432343 PDE3AQ14432 1141 aa17.2■□□□□ 0.34
ARPC1B-208ENST00000432343 TAF7LQ5H9L4 462 aa17.2■□□□□ 0.34
ARPC1B-208ENST00000432343 ARHGAP27Q6ZUM4 889 aa17.2■□□□□ 0.34
ARPC1B-208ENST00000432343 ANKRD18AQ8IVF6 992 aa17.2■□□□□ 0.34
ARPC1B-208ENST00000432343 LRRC37AA6NMS7 1700 aa17.2■□□□□ 0.34
ARPC1B-208ENST00000432343 A0A1B0GUL6 1792 aa17.2■□□□□ 0.34
ARPC1B-208ENST00000432343 ANKRD18BA2A2Z9 1011 aa17.19■□□□□ 0.34
ARPC1B-208ENST00000432343 ZBTB7BO15156 539 aaPredicted RBP17.19■□□□□ 0.34
ARPC1B-208ENST00000432343 GNAI2P04899 355 aa17.19■□□□□ 0.34
ARPC1B-208ENST00000432343 IFIT5Q13325 482 aaKnown RBP17.19■□□□□ 0.34
ARPC1B-208ENST00000432343 CCDC57Q2TAC2 916 aa17.19■□□□□ 0.34
ARPC1B-208ENST00000432343 ZNF594Q96JF6 807 aaPredicted RBP17.19■□□□□ 0.34
ARPC1B-208ENST00000432343 CDC5LQ99459 802 aaKnown RBP17.19■□□□□ 0.34
ARPC1B-208ENST00000432343 SBF1O95248 1867 aa17.18■□□□□ 0.34
ARPC1B-208ENST00000432343 CHD4Q14839 1912 aa17.18■□□□□ 0.34
ARPC1B-208ENST00000432343 RPS8P62241 208 aaKnown RBP17.18■□□□□ 0.34
ARPC1B-208ENST00000432343 IRX6P78412 446 aaPredicted RBP17.18■□□□□ 0.34
ARPC1B-208ENST00000432343 RASSF7Q02833 373 aa17.18■□□□□ 0.34
ARPC1B-208ENST00000432343 DDX19BQ9UMR2 479 aa17.18■□□□□ 0.34
ARPC1B-208ENST00000432343 GOLGB1Q14789 3259 aaKnown RBP17.18■□□□□ 0.34
ARPC1B-208ENST00000432343 RTL9Q8NET4 1388 aa17.17■□□□□ 0.34
ARPC1B-208ENST00000432343 BBOX1O75936 387 aa17.17■□□□□ 0.34
ARPC1B-208ENST00000432343 IGHMBP2P38935 993 aaKnown RBP17.17■□□□□ 0.34
ARPC1B-208ENST00000432343 CCDC93Q567U6 631 aa17.17■□□□□ 0.34
ARPC1B-208ENST00000432343 CRBNQ96SW2 442 aa17.17■□□□□ 0.34
ARPC1B-208ENST00000432343 TMX4Q9H1E5 349 aaPredicted RBP17.17■□□□□ 0.34
ARPC1B-208ENST00000432343 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
ARPC1B-208ENST00000432343 RABL6Q3YEC7 729 aaPredicted RBP17.16■□□□□ 0.34
ARPC1B-208ENST00000432343 KLHDC4Q8TBB5 520 aa17.16■□□□□ 0.34
ARPC1B-208ENST00000432343 C7orf43Q8WVR3 580 aa17.16■□□□□ 0.34
ARPC1B-208ENST00000432343 MPHOSPH8Q99549 860 aa17.16■□□□□ 0.34
ARPC1B-208ENST00000432343 GRIN3BO60391 1043 aa17.15■□□□□ 0.34
ARPC1B-208ENST00000432343 ATP6V0A2Q9Y487 856 aa17.15■□□□□ 0.34
ARPC1B-208ENST00000432343 SP8Q8IXZ3 490 aa17.14■□□□□ 0.33
ARPC1B-208ENST00000432343 NFKBIEO00221 500 aa17.13■□□□□ 0.33
ARPC1B-208ENST00000432343 SRGAP3O43295 1099 aa17.13■□□□□ 0.33
ARPC1B-208ENST00000432343 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
ARPC1B-208ENST00000432343 GPSM2P81274 684 aa17.13■□□□□ 0.33
ARPC1B-208ENST00000432343 SOGA3Q5TF21 947 aa17.13■□□□□ 0.33
ARPC1B-208ENST00000432343 PUS3Q9BZE2 481 aaKnown RBP17.13■□□□□ 0.33
ARPC1B-208ENST00000432343 SIL1Q9H173 461 aa17.13■□□□□ 0.33
ARPC1B-208ENST00000432343 CNNM1Q9NRU3 951 aa17.13■□□□□ 0.33
ARPC1B-208ENST00000432343 DICER1Q9UPY3 1922 aaKnown RBP17.13■□□□□ 0.33
ARPC1B-208ENST00000432343 LTBP1Q14766 1721 aa17.13■□□□□ 0.33
ARPC1B-208ENST00000432343 TIAM2Q8IVF5 1701 aa17.13■□□□□ 0.33
ARPC1B-208ENST00000432343 PNMA6EA0A0J9YXQ4 647 aa17.12■□□□□ 0.33
ARPC1B-208ENST00000432343 DPP8Q6V1X1 898 aaPredicted RBP17.12■□□□□ 0.33
ARPC1B-208ENST00000432343 LDHAL6AQ6ZMR3 332 aa17.12■□□□□ 0.33
ARPC1B-208ENST00000432343 TMC4Q7Z404 712 aa17.12■□□□□ 0.33
ARPC1B-208ENST00000432343 MPNDQ8N594 471 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms