RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 PRAMEF22A3QJZ6 481 aa21.09■□□□□ 0.97
NUP50-209ENST00000432340 PARP10Q53GL7 1025 aa21.09■□□□□ 0.97
NUP50-209ENST00000432340 SAMD7Q7Z3H4 446 aa21.09■□□□□ 0.97
NUP50-209ENST00000432340 TMC4Q7Z404 712 aa21.09■□□□□ 0.97
NUP50-209ENST00000432340 ADM5C9JUS6 153 aa21.07■□□□□ 0.96
NUP50-209ENST00000432340 GPTP24298 496 aa21.07■□□□□ 0.96
NUP50-209ENST00000432340 TBC1D10BQ4KMP7 808 aaPredicted RBP21.07■□□□□ 0.96
NUP50-209ENST00000432340 SUSD4Q5VX71 490 aa21.07■□□□□ 0.96
NUP50-209ENST00000432340 RASAL3Q86YV0 1011 aa21.07■□□□□ 0.96
NUP50-209ENST00000432340 GPR25O00155 361 aa21.06■□□□□ 0.96
NUP50-209ENST00000432340 EIF4G2P78344 907 aaKnown RBP eCLIP21.06■□□□□ 0.96
NUP50-209ENST00000432340 AMER1Q5JTC6 1135 aaPredicted RBP21.06■□□□□ 0.96
NUP50-209ENST00000432340 NGEFQ8N5V2 710 aa21.05■□□□□ 0.96
NUP50-209ENST00000432340 ABCC4O15439 1325 aa21.04■□□□□ 0.96
NUP50-209ENST00000432340 FKTNO75072 461 aa21.04■□□□□ 0.96
NUP50-209ENST00000432340 NTSR2O95665 410 aa21.04■□□□□ 0.96
NUP50-209ENST00000432340 SLC10A5Q5PT55 438 aa21.04■□□□□ 0.96
NUP50-209ENST00000432340 RBM26Q5T8P6 1007 aaKnown RBP21.04■□□□□ 0.96
NUP50-209ENST00000432340 DDX46Q7L014 1031 aaKnown RBP21.04■□□□□ 0.96
NUP50-209ENST00000432340 ZBTB12Q9Y330 459 aaPredicted RBP21.04■□□□□ 0.96
NUP50-209ENST00000432340 SHTN1A0MZ66 631 aa21.03■□□□□ 0.96
NUP50-209ENST00000432340 TBC1D8O95759 1140 aa21.03■□□□□ 0.96
NUP50-209ENST00000432340 SREBF2Q12772 1141 aa21.03■□□□□ 0.96
NUP50-209ENST00000432340 KIF4BQ2VIQ3 1234 aa21.03■□□□□ 0.96
NUP50-209ENST00000432340 DLK2Q6UY11 383 aa21.03■□□□□ 0.96
NUP50-209ENST00000432340 ZNF34Q8IZ26 560 aa21.03■□□□□ 0.96
NUP50-209ENST00000432340 CDCA5Q96FF9 252 aa21.03■□□□□ 0.96
NUP50-209ENST00000432340 UTP14AQ9BVJ6 771 aaKnown RBP21.03■□□□□ 0.96
NUP50-209ENST00000432340 UBN2Q6ZU65 1347 aa21.03■□□□□ 0.96
NUP50-209ENST00000432340 YDJCA8MPS7 323 aa21.02■□□□□ 0.96
NUP50-209ENST00000432340 PSMD14O00487 310 aa21.02■□□□□ 0.96
NUP50-209ENST00000432340 WASHC4Q2M389 1173 aa21.02■□□□□ 0.96
NUP50-209ENST00000432340 GGA3Q9NZ52 723 aa21.02■□□□□ 0.96
NUP50-209ENST00000432340 HTATSF1O43719 755 aaKnown RBP21.01■□□□□ 0.95
NUP50-209ENST00000432340 ALDH1A1P00352 501 aa21■□□□□ 0.95
NUP50-209ENST00000432340 TM4SF4P48230 202 aa21■□□□□ 0.95
NUP50-209ENST00000432340 GIGYF2Q6Y7W6 1299 aaKnown RBP21■□□□□ 0.95
NUP50-209ENST00000432340 NECTIN2Q92692 538 aa21■□□□□ 0.95
NUP50-209ENST00000432340 CFHR5Q9BXR6 569 aa21■□□□□ 0.95
NUP50-209ENST00000432340 ZBTB3Q9H5J0 574 aa21■□□□□ 0.95
NUP50-209ENST00000432340 DLL1O00548 723 aa20.99■□□□□ 0.95
NUP50-209ENST00000432340 GRAPQ13588 217 aa20.99■□□□□ 0.95
NUP50-209ENST00000432340 TAF7Q15545 349 aaPredicted RBP20.99■□□□□ 0.95
NUP50-209ENST00000432340 C3orf67Q6ZVT6 689 aa20.99■□□□□ 0.95
NUP50-209ENST00000432340 GRAPLQ8TC17 118 aaPredicted RBP20.99■□□□□ 0.95
NUP50-209ENST00000432340 PNISRQ8TF01 805 aaKnown RBP20.99■□□□□ 0.95
NUP50-209ENST00000432340 EYA3Q99504 573 aa20.99■□□□□ 0.95
NUP50-209ENST00000432340 RRP7AQ9Y3A4 280 aaKnown RBP20.99■□□□□ 0.95
NUP50-209ENST00000432340 PRKAR2BP31323 418 aa20.98■□□□□ 0.95
NUP50-209ENST00000432340 SLC51AQ86UW1 340 aa20.98■□□□□ 0.95
NUP50-209ENST00000432340 AKAP11Q9UKA4 1901 aa20.98■□□□□ 0.95
NUP50-209ENST00000432340 SIPA1L3O60292 1781 aaPredicted RBP20.97■□□□□ 0.95
NUP50-209ENST00000432340 TTLL7Q6ZT98 887 aa20.97■□□□□ 0.95
NUP50-209ENST00000432340 EGFRP00533 1210 aa20.96■□□□□ 0.95
NUP50-209ENST00000432340 MCM10Q7L590 875 aa20.96■□□□□ 0.95
NUP50-209ENST00000432340 DBNDD1Q9H9R9 158 aa20.96■□□□□ 0.95
NUP50-209ENST00000432340 NUDCQ9Y266 331 aa20.96■□□□□ 0.95
NUP50-209ENST00000432340 ERBB4Q15303 1308 aa20.96■□□□□ 0.95
NUP50-209ENST00000432340 NF2P35240 595 aa20.95■□□□□ 0.94
NUP50-209ENST00000432340 TCIRG1Q13488 830 aa20.95■□□□□ 0.94
NUP50-209ENST00000432340 PHACTR3Q96KR7 559 aa20.95■□□□□ 0.94
NUP50-209ENST00000432340 CFAP53Q96M91 514 aa20.95■□□□□ 0.94
NUP50-209ENST00000432340 HSP90AB3PQ58FF7 597 aa20.94■□□□□ 0.94
NUP50-209ENST00000432340 NSFL1CQ9UNZ2 370 aaKnown RBP20.94■□□□□ 0.94
NUP50-209ENST00000432340 TRIM17Q9Y577 477 aa20.94■□□□□ 0.94
NUP50-209ENST00000432340 PITPNM2Q9BZ72 1349 aa20.94■□□□□ 0.94
NUP50-209ENST00000432340 G3V3G9 751 aa20.93■□□□□ 0.94
NUP50-209ENST00000432340 C6orf229H3BNL8 230 aa20.93■□□□□ 0.94
NUP50-209ENST00000432340 ECE2O60344 883 aa20.93■□□□□ 0.94
NUP50-209ENST00000432340 HSPA5P11021 654 aaKnown RBP20.93■□□□□ 0.94
NUP50-209ENST00000432340 MYL6BP14649 208 aa20.93■□□□□ 0.94
NUP50-209ENST00000432340 TTLL12Q14166 644 aaPredicted RBP20.93■□□□□ 0.94
NUP50-209ENST00000432340 DCAF8Q5TAQ9 597 aa20.93■□□□□ 0.94
NUP50-209ENST00000432340 ANGEL2Q5VTE6 544 aaKnown RBP20.93■□□□□ 0.94
NUP50-209ENST00000432340 SLC17A8Q8NDX2 589 aa20.93■□□□□ 0.94
NUP50-209ENST00000432340 TMEM106CQ9BVX2 250 aa20.93■□□□□ 0.94
NUP50-209ENST00000432340 COLQQ9Y215 455 aaPredicted RBP20.93■□□□□ 0.94
NUP50-209ENST00000432340 POTEFA5A3E0 1075 aa20.92■□□□□ 0.94
NUP50-209ENST00000432340 RSPH6AQ9H0K4 717 aa20.92■□□□□ 0.94
NUP50-209ENST00000432340 VIL1P09327 827 aaKnown RBP20.91■□□□□ 0.94
NUP50-209ENST00000432340 INHBEP58166 350 aa20.91■□□□□ 0.94
NUP50-209ENST00000432340 SCARF1Q14162 830 aa20.91■□□□□ 0.94
NUP50-209ENST00000432340 CC2D1BQ5T0F9 858 aaKnown RBP20.91■□□□□ 0.94
NUP50-209ENST00000432340 AGBL3Q8NEM8 1001 aa20.91■□□□□ 0.94
NUP50-209ENST00000432340 RIMBP2O15034 1052 aa20.9■□□□□ 0.94
NUP50-209ENST00000432340 ZNF280AP59817 542 aaPredicted RBP20.9■□□□□ 0.94
NUP50-209ENST00000432340 ZC3H12CQ9C0D7 883 aaKnown RBP20.9■□□□□ 0.94
NUP50-209ENST00000432340 PAPPA2Q9BXP8 1791 aa20.9■□□□□ 0.94
NUP50-209ENST00000432340 SH3TC1Q8TE82 1336 aa20.89■□□□□ 0.93
NUP50-209ENST00000432340 UBE2Q2LH0YL09 131 aa20.89■□□□□ 0.93
NUP50-209ENST00000432340 ERO1AQ96HE7 468 aa20.89■□□□□ 0.93
NUP50-209ENST00000432340 OTOP1Q7RTM1 612 aa20.88■□□□□ 0.93
NUP50-209ENST00000432340 ARMC5Q96C12 935 aa20.88■□□□□ 0.93
NUP50-209ENST00000432340 TRMT112Q9UI30 125 aaKnown RBP20.88■□□□□ 0.93
NUP50-209ENST00000432340 COL3A1P02461 1466 aaPredicted RBP20.88■□□□□ 0.93
NUP50-209ENST00000432340 NEFMP07197 916 aa20.87■□□□□ 0.93
NUP50-209ENST00000432340 HCLS1P14317 486 aaPredicted RBP20.87■□□□□ 0.93
NUP50-209ENST00000432340 ARMC9Q7Z3E5 817 aa20.87■□□□□ 0.93
NUP50-209ENST00000432340 RTL9Q8NET4 1388 aa20.86■□□□□ 0.93
NUP50-209ENST00000432340 USP17L8P0C7I0 530 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms