RNA–Protein interactions for RNA: ENST00000432192.5

CLCN1-202, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 491 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-202ENST00000432192 RTKN2Q8IZC4 609 aa18.66■□□□□ 0.58
CLCN1-202ENST00000432192 CDHR2Q9BYE9 1310 aa18.66■□□□□ 0.58
CLCN1-202ENST00000432192 ALDH1L1O75891 902 aa18.65■□□□□ 0.58
CLCN1-202ENST00000432192 CASP7P55210 303 aa18.65■□□□□ 0.58
CLCN1-202ENST00000432192 SF3B3Q15393 1217 aaKnown RBP18.65■□□□□ 0.58
CLCN1-202ENST00000432192 ARHGAP45Q92619 1136 aa18.65■□□□□ 0.58
CLCN1-202ENST00000432192 CRAMP1Q96RY5 1269 aa18.65■□□□□ 0.58
CLCN1-202ENST00000432192 SRCIN1Q9C0H9 1055 aa18.65■□□□□ 0.58
CLCN1-202ENST00000432192 PPEF1O14829 653 aaPredicted RBP18.64■□□□□ 0.57
CLCN1-202ENST00000432192 FKBP4Q02790 459 aaKnown RBP eCLIP18.64■□□□□ 0.57
CLCN1-202ENST00000432192 CC2D2BQ6DHV5 1058 aa18.64■□□□□ 0.57
CLCN1-202ENST00000432192 UBE3BQ7Z3V4 1068 aa18.64■□□□□ 0.57
CLCN1-202ENST00000432192 C7orf43Q8WVR3 580 aa18.64■□□□□ 0.57
CLCN1-202ENST00000432192 KIF16BQ96L93 1317 aa18.64■□□□□ 0.57
CLCN1-202ENST00000432192 PDE8AO60658 829 aa18.63■□□□□ 0.57
CLCN1-202ENST00000432192 HSP90B1P14625 803 aaKnown RBP18.63■□□□□ 0.57
CLCN1-202ENST00000432192 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
CLCN1-202ENST00000432192 KIF3CO14782 793 aa18.62■□□□□ 0.57
CLCN1-202ENST00000432192 GRIPAP1Q4V328 841 aa18.62■□□□□ 0.57
CLCN1-202ENST00000432192 DPY19L2Q6NUT2 758 aa18.62■□□□□ 0.57
CLCN1-202ENST00000432192 NMRK2Q9NPI5 230 aa18.62■□□□□ 0.57
CLCN1-202ENST00000432192 TAF1P21675 1872 aa18.62■□□□□ 0.57
CLCN1-202ENST00000432192 GRM8O00222 908 aa18.61■□□□□ 0.57
CLCN1-202ENST00000432192 IPO8O15397 1037 aaKnown RBP18.61■□□□□ 0.57
CLCN1-202ENST00000432192 PRELPP51888 382 aa18.61■□□□□ 0.57
CLCN1-202ENST00000432192 DDX46Q7L014 1031 aaKnown RBP18.61■□□□□ 0.57
CLCN1-202ENST00000432192 FRAT1Q92837 279 aaPredicted RBP18.61■□□□□ 0.57
CLCN1-202ENST00000432192 WDR90Q96KV7 1748 aa18.6■□□□□ 0.57
CLCN1-202ENST00000432192 ABCC4O15439 1325 aa18.6■□□□□ 0.57
CLCN1-202ENST00000432192 GLTPD2A6NH11 291 aa18.6■□□□□ 0.57
CLCN1-202ENST00000432192 PLA2G12BQ9BX93 195 aa18.6■□□□□ 0.57
CLCN1-202ENST00000432192 TNNQ9UQP3 1299 aa18.6■□□□□ 0.57
CLCN1-202ENST00000432192 MYH3P11055 1940 aa18.6■□□□□ 0.57
CLCN1-202ENST00000432192 UTYO14607 1347 aa18.59■□□□□ 0.57
CLCN1-202ENST00000432192 TRIM27P14373 513 aa18.59■□□□□ 0.57
CLCN1-202ENST00000432192 CTSWP56202 376 aa18.59■□□□□ 0.57
CLCN1-202ENST00000432192 OLFM4Q6UX06 510 aa18.59■□□□□ 0.57
CLCN1-202ENST00000432192 ATF7IPQ6VMQ6 1270 aa18.59■□□□□ 0.57
CLCN1-202ENST00000432192 TTLL11Q8NHH1 800 aa18.59■□□□□ 0.57
CLCN1-202ENST00000432192 C9orf78Q9NZ63 289 aaPredicted RBP18.59■□□□□ 0.57
CLCN1-202ENST00000432192 BBOX1O75936 387 aa18.58■□□□□ 0.56
CLCN1-202ENST00000432192 TOMM70O94826 608 aa18.58■□□□□ 0.56
CLCN1-202ENST00000432192 NBPF7P0C2Y1 421 aaPredicted RBP18.58■□□□□ 0.56
CLCN1-202ENST00000432192 CCT4P50991 539 aaKnown RBP18.58■□□□□ 0.56
CLCN1-202ENST00000432192 GRAPQ13588 217 aa18.58■□□□□ 0.56
CLCN1-202ENST00000432192 SLC51AQ86UW1 340 aa18.58■□□□□ 0.56
CLCN1-202ENST00000432192 GRAPLQ8TC17 118 aaPredicted RBP18.58■□□□□ 0.56
CLCN1-202ENST00000432192 PSMD1Q99460 953 aa18.58■□□□□ 0.56
CLCN1-202ENST00000432192 USP44Q9H0E7 712 aa18.58■□□□□ 0.56
CLCN1-202ENST00000432192 RRAGCQ9HB90 399 aa18.58■□□□□ 0.56
CLCN1-202ENST00000432192 SEC31BQ9NQW1 1179 aa18.58■□□□□ 0.56
CLCN1-202ENST00000432192 ZNF277Q9NRM2 450 aaPredicted RBP18.58■□□□□ 0.56
CLCN1-202ENST00000432192 COL4A1P02462 1669 aa18.57■□□□□ 0.56
CLCN1-202ENST00000432192 CSF1RP07333 972 aa18.57■□□□□ 0.56
CLCN1-202ENST00000432192 IARSP41252 1262 aaKnown RBP18.57■□□□□ 0.56
CLCN1-202ENST00000432192 FOXO4P98177 505 aa18.57■□□□□ 0.56
CLCN1-202ENST00000432192 CCDC152Q4G0S7 254 aa18.57■□□□□ 0.56
CLCN1-202ENST00000432192 ZKSCAN2Q63HK3 967 aa18.57■□□□□ 0.56
CLCN1-202ENST00000432192 INTS3Q68E01 1043 aaKnown RBP18.57■□□□□ 0.56
CLCN1-202ENST00000432192 CELF1Q92879 486 aaKnown RBP18.57■□□□□ 0.56
CLCN1-202ENST00000432192 CCDC85AQ96PX6 553 aaPredicted RBP18.57■□□□□ 0.56
CLCN1-202ENST00000432192 RCAN3Q9UKA8 241 aa18.57■□□□□ 0.56
CLCN1-202ENST00000432192 LRRC37AA6NMS7 1700 aa18.57■□□□□ 0.56
CLCN1-202ENST00000432192 EPHA10Q5JZY3 1008 aa18.56■□□□□ 0.56
CLCN1-202ENST00000432192 TMC4Q7Z404 712 aa18.56■□□□□ 0.56
CLCN1-202ENST00000432192 JDP2Q8WYK2 163 aa18.56■□□□□ 0.56
CLCN1-202ENST00000432192 KAZALD1Q96I82 304 aa18.56■□□□□ 0.56
CLCN1-202ENST00000432192 SNED1Q8TER0 1413 aa18.56■□□□□ 0.56
CLCN1-202ENST00000432192 SCN4AP35499 1836 aa18.56■□□□□ 0.56
CLCN1-202ENST00000432192 VEGFAP15692 232 aaPredicted RBP18.55■□□□□ 0.56
CLCN1-202ENST00000432192 RBM46Q8TBY0 533 aaKnown RBP18.55■□□□□ 0.56
CLCN1-202ENST00000432192 CLUAP1Q96AJ1 413 aa18.55■□□□□ 0.56
CLCN1-202ENST00000432192 SUCLG2Q96I99 432 aa18.55■□□□□ 0.56
CLCN1-202ENST00000432192 GREM2Q9H772 168 aa18.55■□□□□ 0.56
CLCN1-202ENST00000432192 ATP6V0A2Q9Y487 856 aa18.55■□□□□ 0.56
CLCN1-202ENST00000432192 RTL9Q8NET4 1388 aa18.55■□□□□ 0.56
CLCN1-202ENST00000432192 RPS8P62241 208 aaKnown RBP18.54■□□□□ 0.56
CLCN1-202ENST00000432192 SP8Q8IXZ3 490 aa18.54■□□□□ 0.56
CLCN1-202ENST00000432192 SUPT20HQ8NEM7 779 aa18.54■□□□□ 0.56
CLCN1-202ENST00000432192 HSPA6P17066 643 aa18.52■□□□□ 0.56
CLCN1-202ENST00000432192 LMBR1LQ6UX01 489 aa18.52■□□□□ 0.56
CLCN1-202ENST00000432192 DPP8Q6V1X1 898 aaPredicted RBP18.52■□□□□ 0.56
CLCN1-202ENST00000432192 LARGE2Q8N3Y3 721 aa18.52■□□□□ 0.56
CLCN1-202ENST00000432192 SPEF2Q9C093 1822 aa18.51■□□□□ 0.55
CLCN1-202ENST00000432192 IQCA1LA6NCM1 817 aa18.51■□□□□ 0.55
CLCN1-202ENST00000432192 RLBP1P12271 317 aa18.51■□□□□ 0.55
CLCN1-202ENST00000432192 EIF6P56537 245 aaKnown RBP18.51■□□□□ 0.55
CLCN1-202ENST00000432192 FSTL1Q12841 308 aa18.51■□□□□ 0.55
CLCN1-202ENST00000432192 FAM161AQ3B820 660 aa18.51■□□□□ 0.55
CLCN1-202ENST00000432192 DZIP1LQ8IYY4 767 aaKnown RBP18.51■□□□□ 0.55
CLCN1-202ENST00000432192 MPNDQ8N594 471 aa18.51■□□□□ 0.55
CLCN1-202ENST00000432192 TMEM57Q8N5G2 664 aa18.51■□□□□ 0.55
CLCN1-202ENST00000432192 SMC1BQ8NDV3 1235 aa18.51■□□□□ 0.55
CLCN1-202ENST00000432192 PPIP5K2O43314 1243 aa18.5■□□□□ 0.55
CLCN1-202ENST00000432192 DDNO94850 711 aaPredicted RBP18.5■□□□□ 0.55
CLCN1-202ENST00000432192 ITGA6P23229 1130 aa18.5■□□□□ 0.55
CLCN1-202ENST00000432192 ANKRD18AQ8IVF6 992 aa18.5■□□□□ 0.55
CLCN1-202ENST00000432192 NIM1KQ8IY84 436 aa18.5■□□□□ 0.55
CLCN1-202ENST00000432192 CDC5LQ99459 802 aaKnown RBP18.5■□□□□ 0.55
CLCN1-202ENST00000432192 MEIS3Q99687 375 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms