RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 THSD7AQ9UPZ6 1657 aa15.27■□□□□ 0.04
LINC00840-201ENST00000431737 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.27■□□□□ 0.03
LINC00840-201ENST00000431737 TTC14Q96N46 770 aa15.27■□□□□ 0.03
LINC00840-201ENST00000431737 FSD1Q9BTV5 496 aa15.27■□□□□ 0.03
LINC00840-201ENST00000431737 BCL9LQ86UU0 1499 aa15.26■□□□□ 0.03
LINC00840-201ENST00000431737 RASEFQ8IZ41 740 aa15.26■□□□□ 0.03
LINC00840-201ENST00000431737 MAP4K1Q92918 833 aa15.26■□□□□ 0.03
LINC00840-201ENST00000431737 FOXD4L1Q9NU39 408 aa15.26■□□□□ 0.03
LINC00840-201ENST00000431737 CHMP3Q9Y3E7 222 aa15.26■□□□□ 0.03
LINC00840-201ENST00000431737 EIF5P55010 431 aaKnown RBP15.25■□□□□ 0.03
LINC00840-201ENST00000431737 PTH1RQ03431 593 aa15.25■□□□□ 0.03
LINC00840-201ENST00000431737 NECTIN1Q15223 517 aa15.25■□□□□ 0.03
LINC00840-201ENST00000431737 HLFQ16534 295 aa15.25■□□□□ 0.03
LINC00840-201ENST00000431737 RIC1Q4ADV7 1423 aa15.25■□□□□ 0.03
LINC00840-201ENST00000431737 DDX60Q8IY21 1712 aaKnown RBP15.25■□□□□ 0.03
LINC00840-201ENST00000431737 FAM227BQ96M60 508 aa15.25■□□□□ 0.03
LINC00840-201ENST00000431737 MYH7P12883 1935 aa15.25■□□□□ 0.03
LINC00840-201ENST00000431737 A0A0D9SFI3 127 aa15.25■□□□□ 0.03
LINC00840-201ENST00000431737 SYTL4Q96C24 671 aaPredicted RBP15.25■□□□□ 0.03
LINC00840-201ENST00000431737 ABCC12Q96J65 1359 aa15.25■□□□□ 0.03
LINC00840-201ENST00000431737 RPAP1Q9BWH6 1393 aaPredicted RBP15.25■□□□□ 0.03
LINC00840-201ENST00000431737 SSFA2P28290 1259 aa15.24■□□□□ 0.03
LINC00840-201ENST00000431737 CCDC57Q2TAC2 916 aa15.24■□□□□ 0.03
LINC00840-201ENST00000431737 ZNF34Q8IZ26 560 aa15.24■□□□□ 0.03
LINC00840-201ENST00000431737 AK7Q96M32 723 aa15.24■□□□□ 0.03
LINC00840-201ENST00000431737 UPF3BQ9BZI7 483 aaKnown RBP15.24■□□□□ 0.03
LINC00840-201ENST00000431737 CCDC87Q9NVE4 849 aa15.24■□□□□ 0.03
LINC00840-201ENST00000431737 ZNF330Q9Y3S2 320 aaPredicted RBP15.24■□□□□ 0.03
LINC00840-201ENST00000431737 NHSQ6T4R5 1651 aa15.24■□□□□ 0.03
LINC00840-201ENST00000431737 VPS72Q15906 364 aa15.24■□□□□ 0.03
LINC00840-201ENST00000431737 LRRC24Q50LG9 513 aa15.24■□□□□ 0.03
LINC00840-201ENST00000431737 INTS5Q6P9B9 1019 aaKnown RBP15.24■□□□□ 0.03
LINC00840-201ENST00000431737 ZGPATQ8N5A5 531 aaKnown RBP15.24■□□□□ 0.03
LINC00840-201ENST00000431737 SH3TC1Q8TE82 1336 aa15.23■□□□□ 0.03
LINC00840-201ENST00000431737 NUTM2BA6NNL0 878 aaPredicted RBP15.23■□□□□ 0.03
LINC00840-201ENST00000431737 NUTM2EB1AL46 878 aaPredicted RBP15.23■□□□□ 0.03
LINC00840-201ENST00000431737 DZIP3Q86Y13 1208 aaKnown RBP15.23■□□□□ 0.03
LINC00840-201ENST00000431737 NUTM2AQ8IVF1 878 aaPredicted RBP15.23■□□□□ 0.03
LINC00840-201ENST00000431737 KBTBD3Q8NAB2 608 aa15.23■□□□□ 0.03
LINC00840-201ENST00000431737 SMARCC1Q92922 1105 aaPredicted RBP15.23■□□□□ 0.03
LINC00840-201ENST00000431737 FAM89AQ96GI7 184 aa15.23■□□□□ 0.03
LINC00840-201ENST00000431737 RBM8AQ9Y5S9 174 aaKnown RBP15.23■□□□□ 0.03
LINC00840-201ENST00000431737 SCN7AQ01118 1682 aa15.23■□□□□ 0.03
LINC00840-201ENST00000431737 LOC102724428A0A0B4J2F2 783 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 CTSWP56202 376 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 SIK1P57059 783 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 PIP4K2BP78356 416 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 USPL1Q5W0Q7 1092 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 ZNF594Q96JF6 807 aaPredicted RBP15.22■□□□□ 0.03
LINC00840-201ENST00000431737 ZSWIM6Q9HCJ5 1215 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 AKAP11Q9UKA4 1901 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 A0A1B0GUL7 405 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 TRAK2O60296 914 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 IFIT5Q13325 482 aaKnown RBP15.22■□□□□ 0.03
LINC00840-201ENST00000431737 TSGA10IPQ3SY00 556 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 VPS53Q5VIR6 699 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 HMG20BQ9P0W2 317 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 CEP126Q9P2H0 1117 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 AKAP2Q9Y2D5 859 aa15.22■□□□□ 0.03
LINC00840-201ENST00000431737 UBN2Q6ZU65 1347 aa15.21■□□□□ 0.03
LINC00840-201ENST00000431737 TAF5LO75529 589 aa15.21■□□□□ 0.03
LINC00840-201ENST00000431737 CRKLP46109 303 aaKnown RBP15.21■□□□□ 0.03
LINC00840-201ENST00000431737 CREB3L3Q68CJ9 461 aa15.21■□□□□ 0.03
LINC00840-201ENST00000431737 PRPF40BQ6NWY9 871 aaKnown RBP15.21■□□□□ 0.03
LINC00840-201ENST00000431737 TTLL11Q8NHH1 800 aa15.21■□□□□ 0.03
LINC00840-201ENST00000431737 PUS3Q9BZE2 481 aaKnown RBP15.21■□□□□ 0.03
LINC00840-201ENST00000431737 BTAF1O14981 1849 aa15.2■□□□□ 0.02
LINC00840-201ENST00000431737 BAG4O95429 457 aaKnown RBP15.2■□□□□ 0.02
LINC00840-201ENST00000431737 ZKSCAN1P17029 563 aaPredicted RBP15.2■□□□□ 0.02
LINC00840-201ENST00000431737 SKOR2Q2VWA4 1001 aaPredicted RBP15.2■□□□□ 0.02
LINC00840-201ENST00000431737 FNBP4Q8N3X1 1017 aaPredicted RBP15.2■□□□□ 0.02
LINC00840-201ENST00000431737 EDC3Q96F86 508 aaKnown RBP15.2■□□□□ 0.02
LINC00840-201ENST00000431737 CASZ1Q86V15 1759 aa15.2■□□□□ 0.02
LINC00840-201ENST00000431737 RGL2O15211 777 aa15.2■□□□□ 0.02
LINC00840-201ENST00000431737 ITPK1Q13572 414 aa15.2■□□□□ 0.02
LINC00840-201ENST00000431737 RNF20Q5VTR2 975 aa15.2■□□□□ 0.02
LINC00840-201ENST00000431737 ZNF589Q86UQ0 364 aaPredicted RBP15.2■□□□□ 0.02
LINC00840-201ENST00000431737 ALDH8A1Q9H2A2 487 aaPredicted RBP15.2■□□□□ 0.02
LINC00840-201ENST00000431737 PAG1Q9NWQ8 432 aa15.2■□□□□ 0.02
LINC00840-201ENST00000431737 ZDHHC9Q9Y397 364 aa15.2■□□□□ 0.02
LINC00840-201ENST00000431737 SPATA31A6Q5VVP1 1343 aa15.19■□□□□ 0.02
LINC00840-201ENST00000431737 UBAP1LF5GYI3 381 aa15.19■□□□□ 0.02
LINC00840-201ENST00000431737 IRS4O14654 1257 aaPredicted RBP15.19■□□□□ 0.02
LINC00840-201ENST00000431737 SLC27A2O14975 620 aa15.19■□□□□ 0.02
LINC00840-201ENST00000431737 PDE8AO60658 829 aa15.19■□□□□ 0.02
LINC00840-201ENST00000431737 GPTP24298 496 aa15.19■□□□□ 0.02
LINC00840-201ENST00000431737 ATP6V1AP38606 617 aa15.19■□□□□ 0.02
LINC00840-201ENST00000431737 AK2P54819 239 aa15.19■□□□□ 0.02
LINC00840-201ENST00000431737 DNAJC2Q99543 621 aaKnown RBP15.19■□□□□ 0.02
LINC00840-201ENST00000431737 LIMCH1Q9UPQ0 1083 aa15.19■□□□□ 0.02
LINC00840-201ENST00000431737 RIPOR2Q9Y4F9 1068 aa15.19■□□□□ 0.02
LINC00840-201ENST00000431737 RTL9Q8NET4 1388 aa15.19■□□□□ 0.02
LINC00840-201ENST00000431737 LAMA4Q16363 1823 aa15.19■□□□□ 0.02
LINC00840-201ENST00000431737 GOLGA6L22H0YM25 854 aa15.18■□□□□ 0.02
LINC00840-201ENST00000431737 BRD1O95696 1058 aa15.18■□□□□ 0.02
LINC00840-201ENST00000431737 CASTP20810 708 aaKnown RBP15.18■□□□□ 0.02
LINC00840-201ENST00000431737 TIMM10P62072 90 aa15.18■□□□□ 0.02
LINC00840-201ENST00000431737 PKP1Q13835 747 aa15.18■□□□□ 0.02
LINC00840-201ENST00000431737 RUFY3Q7L099 469 aa15.18■□□□□ 0.02
LINC00840-201ENST00000431737 ACSBG1Q96GR2 724 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms