RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 MPNDQ8N594 471 aa29.16■■■□□ 2.26
PTPRA-207ENST00000431048 THUMPD2Q9BTF0 503 aaKnown RBP29.16■■■□□ 2.26
PTPRA-207ENST00000431048 GLIS2Q9BZE0 524 aaPredicted RBP29.16■■■□□ 2.26
PTPRA-207ENST00000431048 TSKSQ9UJT2 592 aa29.15■■■□□ 2.26
PTPRA-207ENST00000431048 HIRAP54198 1017 aaPredicted RBP29.14■■■□□ 2.26
PTPRA-207ENST00000431048 CDC37L1Q7L3B6 337 aa29.14■■■□□ 2.26
PTPRA-207ENST00000431048 PNNQ9H307 717 aaKnown RBP29.14■■■□□ 2.26
PTPRA-207ENST00000431048 HSP90AB3PQ58FF7 597 aa29.12■■■□□ 2.25
PTPRA-207ENST00000431048 BCL2L13Q9BXK5 485 aa29.12■■■□□ 2.25
PTPRA-207ENST00000431048 MCOLN1Q9GZU1 580 aa29.12■■■□□ 2.25
PTPRA-207ENST00000431048 BABAM1Q9NWV8 329 aa29.11■■■□□ 2.25
PTPRA-207ENST00000431048 RAD17O75943 681 aa29.1■■■□□ 2.25
PTPRA-207ENST00000431048 CNOT7Q9UIV1 285 aaKnown RBP29.1■■■□□ 2.25
PTPRA-207ENST00000431048 TSPYL4Q9UJ04 414 aa29.1■■■□□ 2.25
PTPRA-207ENST00000431048 GRAPQ13588 217 aa29.09■■■□□ 2.25
PTPRA-207ENST00000431048 DDX46Q7L014 1031 aaKnown RBP29.09■■■□□ 2.25
PTPRA-207ENST00000431048 TMC4Q7Z404 712 aa29.09■■■□□ 2.25
PTPRA-207ENST00000431048 NLRP10Q86W26 655 aa29.09■■■□□ 2.25
PTPRA-207ENST00000431048 GRAPLQ8TC17 118 aaPredicted RBP29.09■■■□□ 2.25
PTPRA-207ENST00000431048 EIF2S2P20042 333 aaKnown RBP29.08■■■□□ 2.25
PTPRA-207ENST00000431048 NOGQ13253 232 aa29.08■■■□□ 2.25
PTPRA-207ENST00000431048 TRPM4Q8TD43 1214 aa29.08■■■□□ 2.25
PTPRA-207ENST00000431048 H7C1D1 291 aa29.07■■■□□ 2.24
PTPRA-207ENST00000431048 HCLS1P14317 486 aaPredicted RBP29.07■■■□□ 2.24
PTPRA-207ENST00000431048 PROSER3Q2NL68 480 aa29.07■■■□□ 2.24
PTPRA-207ENST00000431048 DPF2Q92785 391 aa29.07■■■□□ 2.24
PTPRA-207ENST00000431048 MAPK8IP3Q9UPT6 1336 aa29.06■■■□□ 2.24
PTPRA-207ENST00000431048 YDJCA8MPS7 323 aa29.06■■■□□ 2.24
PTPRA-207ENST00000431048 TCIRG1Q13488 830 aa29.06■■■□□ 2.24
PTPRA-207ENST00000431048 ZNF408Q9H9D4 720 aa29.06■■■□□ 2.24
PTPRA-207ENST00000431048 ANKRD36CQ5JPF3 1778 aa29.06■■■□□ 2.24
PTPRA-207ENST00000431048 COPS6Q7L5N1 327 aa29.05■■■□□ 2.24
PTPRA-207ENST00000431048 SH3TC1Q8TE82 1336 aa29.04■■■□□ 2.24
PTPRA-207ENST00000431048 USP48Q86UV5 1035 aa29.04■■■□□ 2.24
PTPRA-207ENST00000431048 TRMT112Q9UI30 125 aaKnown RBP29.04■■■□□ 2.24
PTPRA-207ENST00000431048 CASP8AP2Q9UKL3 1982 aa29.03■■■□□ 2.24
PTPRA-207ENST00000431048 ANXA1P04083 346 aa29.03■■■□□ 2.24
PTPRA-207ENST00000431048 HUNKP57058 714 aa29.02■■■□□ 2.24
PTPRA-207ENST00000431048 DGKZQ13574 1117 aa29.02■■■□□ 2.24
PTPRA-207ENST00000431048 MICALL2Q8IY33 904 aa29.02■■■□□ 2.24
PTPRA-207ENST00000431048 SHTN1A0MZ66 631 aa29.01■■■□□ 2.23
PTPRA-207ENST00000431048 XAGE3Q8WTP9 111 aa29.01■■■□□ 2.23
PTPRA-207ENST00000431048 ZIC5Q96T25 663 aa29.01■■■□□ 2.23
PTPRA-207ENST00000431048 LAMB2P55268 1798 aa29.01■■■□□ 2.23
PTPRA-207ENST00000431048 AIMP1Q12904 312 aaKnown RBP28.99■■■□□ 2.23
PTPRA-207ENST00000431048 DUOX1Q9NRD9 1551 aa28.98■■■□□ 2.23
PTPRA-207ENST00000431048 RIPK4P57078 832 aa28.98■■■□□ 2.23
PTPRA-207ENST00000431048 WASHC4Q2M389 1173 aa28.98■■■□□ 2.23
PTPRA-207ENST00000431048 CFAP44Q96MT7 982 aa28.98■■■□□ 2.23
PTPRA-207ENST00000431048 PCDH10Q9P2E7 1040 aa28.98■■■□□ 2.23
PTPRA-207ENST00000431048 ZBTB12Q9Y330 459 aaPredicted RBP28.98■■■□□ 2.23
PTPRA-207ENST00000431048 FAM155AB1AL88 458 aaPredicted RBP28.97■■■□□ 2.23
PTPRA-207ENST00000431048 PSMD14O00487 310 aa28.97■■■□□ 2.23
PTPRA-207ENST00000431048 RPS12P25398 132 aaKnown RBP28.97■■■□□ 2.23
PTPRA-207ENST00000431048 RGMBQ6NW40 437 aa28.97■■■□□ 2.23
PTPRA-207ENST00000431048 SAMD7Q7Z3H4 446 aa28.97■■■□□ 2.23
PTPRA-207ENST00000431048 CCDC102AQ96A19 550 aa28.97■■■□□ 2.23
PTPRA-207ENST00000431048 SAGE1Q9NXZ1 904 aa28.97■■■□□ 2.23
PTPRA-207ENST00000431048 SF3B3Q15393 1217 aaKnown RBP28.96■■■□□ 2.23
PTPRA-207ENST00000431048 KRT26Q7Z3Y9 468 aa28.96■■■□□ 2.23
PTPRA-207ENST00000431048 C2orf69Q8N8R5 385 aa28.95■■■□□ 2.22
PTPRA-207ENST00000431048 GBA2Q9HCG7 927 aaPredicted RBP28.95■■■□□ 2.22
PTPRA-207ENST00000431048 LRRC37AA6NMS7 1700 aa28.94■■■□□ 2.22
PTPRA-207ENST00000431048 LMOD3Q0VAK6 560 aa28.94■■■□□ 2.22
PTPRA-207ENST00000431048 DLK2Q6UY11 383 aa28.94■■■□□ 2.22
PTPRA-207ENST00000431048 NSFL1CQ9UNZ2 370 aaKnown RBP28.94■■■□□ 2.22
PTPRA-207ENST00000431048 TBC1D10BQ4KMP7 808 aaPredicted RBP28.93■■■□□ 2.22
PTPRA-207ENST00000431048 NECTIN2Q92692 538 aa28.93■■■□□ 2.22
PTPRA-207ENST00000431048 CELF1Q92879 486 aaKnown RBP28.92■■■□□ 2.22
PTPRA-207ENST00000431048 DCPSQ96C86 337 aaKnown RBP28.92■■■□□ 2.22
PTPRA-207ENST00000431048 DBNDD1Q9H9R9 158 aa28.92■■■□□ 2.22
PTPRA-207ENST00000431048 POLLQ9UGP5 575 aa28.92■■■□□ 2.22
PTPRA-207ENST00000431048 EGFRP00533 1210 aa28.91■■■□□ 2.22
PTPRA-207ENST00000431048 TMPOP42166 694 aaKnown RBP28.91■■■□□ 2.22
PTPRA-207ENST00000431048 KIF23Q02241 960 aaPredicted RBP28.91■■■□□ 2.22
PTPRA-207ENST00000431048 PLBD2Q8NHP8 589 aa28.91■■■□□ 2.22
PTPRA-207ENST00000431048 EYA3Q99504 573 aa28.91■■■□□ 2.22
PTPRA-207ENST00000431048 ISCA1Q9BUE6 129 aa28.91■■■□□ 2.22
PTPRA-207ENST00000431048 TNRC18O15417 2968 aaPredicted RBP28.91■■■□□ 2.22
PTPRA-207ENST00000431048 TAF1P21675 1872 aa28.91■■■□□ 2.22
PTPRA-207ENST00000431048 C6orf229H3BNL8 230 aa28.89■■■□□ 2.22
PTPRA-207ENST00000431048 CHL1O00533 1208 aa28.89■■■□□ 2.22
PTPRA-207ENST00000431048 RIMBP2O15034 1052 aa28.89■■■□□ 2.22
PTPRA-207ENST00000431048 GPSM2P81274 684 aa28.89■■■□□ 2.22
PTPRA-207ENST00000431048 ECE2O60344 883 aa28.88■■■□□ 2.21
PTPRA-207ENST00000431048 ZNF157P51786 506 aaPredicted RBP28.88■■■□□ 2.21
PTPRA-207ENST00000431048 ANKRD13DQ6ZTN6 518 aa28.88■■■□□ 2.21
PTPRA-207ENST00000431048 FAM89AQ96GI7 184 aa28.88■■■□□ 2.21
PTPRA-207ENST00000431048 KCNQ5Q9NR82 932 aa28.88■■■□□ 2.21
PTPRA-207ENST00000431048 RNF186Q9NXI6 227 aa28.88■■■□□ 2.21
PTPRA-207ENST00000431048 RTL9Q8NET4 1388 aa28.88■■■□□ 2.21
PTPRA-207ENST00000431048 ADM5C9JUS6 153 aa28.87■■■□□ 2.21
PTPRA-207ENST00000431048 VIL1P09327 827 aaKnown RBP28.87■■■□□ 2.21
PTPRA-207ENST00000431048 TRIM28Q13263 835 aaKnown RBP28.87■■■□□ 2.21
PTPRA-207ENST00000431048 POLR2AP24928 1970 aaKnown RBP28.86■■■□□ 2.21
PTPRA-207ENST00000431048 RBM26Q5T8P6 1007 aaKnown RBP28.86■■■□□ 2.21
PTPRA-207ENST00000431048 REM2Q8IYK8 340 aaPredicted RBP28.86■■■□□ 2.21
PTPRA-207ENST00000431048 TBC1D16Q8TBP0 767 aa28.86■■■□□ 2.21
PTPRA-207ENST00000431048 CHPF2Q9P2E5 772 aa28.86■■■□□ 2.21
PTPRA-207ENST00000431048 SLC10A3P09131 477 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms