RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 USPL1Q5W0Q7 1092 aa16.79■□□□□ 0.28
HOXC4-202ENST00000430889 ZNF589Q86UQ0 364 aaPredicted RBP16.79■□□□□ 0.28
HOXC4-202ENST00000430889 GAS2L3Q86XJ1 694 aa16.79■□□□□ 0.28
HOXC4-202ENST00000430889 SLC4A9Q96Q91 983 aa16.79■□□□□ 0.28
HOXC4-202ENST00000430889 RREB1Q92766 1687 aa16.79■□□□□ 0.28
HOXC4-202ENST00000430889 PALLDQ8WX93 1383 aa16.78■□□□□ 0.28
HOXC4-202ENST00000430889 SLC27A2O14975 620 aa16.78■□□□□ 0.28
HOXC4-202ENST00000430889 MRE11P49959 708 aa16.78■□□□□ 0.28
HOXC4-202ENST00000430889 TICAM2Q86XR7 235 aa16.78■□□□□ 0.28
HOXC4-202ENST00000430889 TCHHQ07283 1943 aa16.78■□□□□ 0.28
HOXC4-202ENST00000430889 EYA2O00167 538 aa16.78■□□□□ 0.28
HOXC4-202ENST00000430889 TAF5LO75529 589 aa16.78■□□□□ 0.28
HOXC4-202ENST00000430889 PCCAP05165 728 aaPredicted RBP16.78■□□□□ 0.28
HOXC4-202ENST00000430889 CPA1P15085 419 aa16.78■□□□□ 0.28
HOXC4-202ENST00000430889 JAKMIP1Q96N16 626 aaKnown RBP16.78■□□□□ 0.28
HOXC4-202ENST00000430889 MAP3K15Q6ZN16 1313 aa16.77■□□□□ 0.28
HOXC4-202ENST00000430889 PHLPP1O60346 1717 aa16.77■□□□□ 0.28
HOXC4-202ENST00000430889 LARGE1O95461 756 aa16.77■□□□□ 0.28
HOXC4-202ENST00000430889 ST3GAL1Q11201 340 aa16.77■□□□□ 0.28
HOXC4-202ENST00000430889 ALDH8A1Q9H2A2 487 aaPredicted RBP16.77■□□□□ 0.28
HOXC4-202ENST00000430889 FBXO3Q9UK99 471 aa16.77■□□□□ 0.28
HOXC4-202ENST00000430889 DDX49Q9Y6V7 483 aaKnown RBP16.77■□□□□ 0.28
HOXC4-202ENST00000430889 LAMA4Q16363 1823 aa16.77■□□□□ 0.27
HOXC4-202ENST00000430889 CYP19A1P11511 503 aaPredicted RBP16.76■□□□□ 0.27
HOXC4-202ENST00000430889 LRRC24Q50LG9 513 aa16.76■□□□□ 0.27
HOXC4-202ENST00000430889 CHAMP1Q96JM3 812 aa16.76■□□□□ 0.27
HOXC4-202ENST00000430889 GRPEL1Q9HAV7 217 aa16.76■□□□□ 0.27
HOXC4-202ENST00000430889 PDRG1Q9NUG6 133 aa16.76■□□□□ 0.27
HOXC4-202ENST00000430889 CYP46A1Q9Y6A2 500 aa16.76■□□□□ 0.27
HOXC4-202ENST00000430889 CDHR2Q9BYE9 1310 aa16.76■□□□□ 0.27
HOXC4-202ENST00000430889 STARD3NLO95772 234 aa16.75■□□□□ 0.27
HOXC4-202ENST00000430889 CSF1RP07333 972 aa16.75■□□□□ 0.27
HOXC4-202ENST00000430889 ZNF445P59923 1031 aa16.75■□□□□ 0.27
HOXC4-202ENST00000430889 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
HOXC4-202ENST00000430889 GIGYF2Q6Y7W6 1299 aaKnown RBP16.75■□□□□ 0.27
HOXC4-202ENST00000430889 KBTBD3Q8NAB2 608 aa16.75■□□□□ 0.27
HOXC4-202ENST00000430889 GPT2Q8TD30 523 aa16.75■□□□□ 0.27
HOXC4-202ENST00000430889 ZSCAN31Q96LW9 406 aaPredicted RBP16.75■□□□□ 0.27
HOXC4-202ENST00000430889 HMG20BQ9P0W2 317 aa16.75■□□□□ 0.27
HOXC4-202ENST00000430889 SH3TC1Q8TE82 1336 aa16.75■□□□□ 0.27
HOXC4-202ENST00000430889 NWD2Q9ULI1 1742 aa16.75■□□□□ 0.27
HOXC4-202ENST00000430889 ZKSCAN1P17029 563 aaPredicted RBP16.75■□□□□ 0.27
HOXC4-202ENST00000430889 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.75■□□□□ 0.27
HOXC4-202ENST00000430889 ZNF594Q96JF6 807 aaPredicted RBP16.75■□□□□ 0.27
HOXC4-202ENST00000430889 PANK2Q9BZ23 570 aa16.75■□□□□ 0.27
HOXC4-202ENST00000430889 SH2B1Q9NRF2 756 aaPredicted RBP16.75■□□□□ 0.27
HOXC4-202ENST00000430889 CHMP3Q9Y3E7 222 aa16.75■□□□□ 0.27
HOXC4-202ENST00000430889 TAF6LQ9Y6J9 622 aa16.75■□□□□ 0.27
HOXC4-202ENST00000430889 NDUFB9Q9Y6M9 179 aa16.75■□□□□ 0.27
HOXC4-202ENST00000430889 WDR33Q9C0J8 1336 aaKnown RBP16.74■□□□□ 0.27
HOXC4-202ENST00000430889 LRP5O75197 1615 aa16.74■□□□□ 0.27
HOXC4-202ENST00000430889 KIF6Q6ZMV9 814 aa16.74■□□□□ 0.27
HOXC4-202ENST00000430889 ZBTB38Q8NAP3 1195 aaPredicted RBP16.74■□□□□ 0.27
HOXC4-202ENST00000430889 PUS3Q9BZE2 481 aaKnown RBP16.74■□□□□ 0.27
HOXC4-202ENST00000430889 PRPF40AO75400 957 aaKnown RBP16.73■□□□□ 0.27
HOXC4-202ENST00000430889 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.73■□□□□ 0.27
HOXC4-202ENST00000430889 MYH7P12883 1935 aa16.73■□□□□ 0.27
HOXC4-202ENST00000430889 RIC1Q4ADV7 1423 aa16.73■□□□□ 0.27
HOXC4-202ENST00000430889 SLIT2O94813 1529 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 EXOC5O00471 708 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 CHGBP05060 677 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 PSMA5P28066 241 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 HLFQ16534 295 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 AKAP11Q9UKA4 1901 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 RPS6KB1P23443 525 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 TIMM10P62072 90 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 ME3Q16798 604 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 MCMDC2Q4G0Z9 681 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 RNF20Q5VTR2 975 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 NLRP10Q86W26 655 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 TMEM87AQ8NBN3 555 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 DNAJC2Q99543 621 aaKnown RBP16.72■□□□□ 0.27
HOXC4-202ENST00000430889 LARP6Q9BRS8 491 aaKnown RBP16.72■□□□□ 0.27
HOXC4-202ENST00000430889 SPATA31A1Q5TZJ5 1347 aa16.72■□□□□ 0.27
HOXC4-202ENST00000430889 KAT6BQ8WYB5 2073 aa16.71■□□□□ 0.27
HOXC4-202ENST00000430889 A0A1B0GUL7 405 aa16.71■□□□□ 0.27
HOXC4-202ENST00000430889 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
HOXC4-202ENST00000430889 DDX46Q7L014 1031 aaKnown RBP16.71■□□□□ 0.27
HOXC4-202ENST00000430889 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
HOXC4-202ENST00000430889 CDCA7Q9BWT1 371 aaPredicted RBP16.71■□□□□ 0.27
HOXC4-202ENST00000430889 PAG1Q9NWQ8 432 aa16.71■□□□□ 0.27
HOXC4-202ENST00000430889 TPCN1Q9ULQ1 816 aa16.71■□□□□ 0.27
HOXC4-202ENST00000430889 ZBTB1Q9Y2K1 713 aa16.71■□□□□ 0.27
HOXC4-202ENST00000430889 ARAP2Q8WZ64 1704 aa16.7■□□□□ 0.26
HOXC4-202ENST00000430889 KCNJ4P48050 445 aa16.7■□□□□ 0.26
HOXC4-202ENST00000430889 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
HOXC4-202ENST00000430889 HSP90AB3PQ58FF7 597 aa16.7■□□□□ 0.26
HOXC4-202ENST00000430889 ZMYM1Q5SVZ6 1142 aa16.7■□□□□ 0.26
HOXC4-202ENST00000430889 FAM89AQ96GI7 184 aa16.7■□□□□ 0.26
HOXC4-202ENST00000430889 SEC62Q99442 399 aaKnown RBP16.7■□□□□ 0.26
HOXC4-202ENST00000430889 NSFL1CQ9UNZ2 370 aaKnown RBP16.7■□□□□ 0.26
HOXC4-202ENST00000430889 THRAP3Q9Y2W1 955 aaKnown RBP16.7■□□□□ 0.26
HOXC4-202ENST00000430889 U3KPZ7 1027 aaPredicted RBP16.7■□□□□ 0.26
HOXC4-202ENST00000430889 ERVV-1B6SEH8 477 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 ZSCAN22P10073 491 aaPredicted RBP16.69■□□□□ 0.26
HOXC4-202ENST00000430889 SYT1P21579 422 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 TOB2Q14106 344 aaPredicted RBP16.69■□□□□ 0.26
HOXC4-202ENST00000430889 CCDC57Q2TAC2 916 aa16.69■□□□□ 0.26
HOXC4-202ENST00000430889 CAVIN1Q6NZI2 390 aaKnown RBP16.69■□□□□ 0.26
HOXC4-202ENST00000430889 CCDC129Q6ZRS4 1044 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms