RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 PRC1O43663 620 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 RANBP6O60518 1105 aaKnown RBP6.83□□□□□ -1.32
UBR3-204ENST00000430321 LDHBP07195 334 aaKnown RBP6.83□□□□□ -1.32
UBR3-204ENST00000430321 NLRP5P59047 1200 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 CCNA1P78396 465 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 MNS1Q8NEH6 495 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 MLH3Q9UHC1 1453 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 NOD1Q9Y239 953 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 COL17A1Q9UMD9 1497 aaPredicted RBP6.83□□□□□ -1.32
UBR3-204ENST00000430321 RAD50Q92878 1312 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 MINDY4BA8MYZ0 360 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 GCP02774 474 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 VIMP08670 466 aaKnown RBP6.83□□□□□ -1.32
UBR3-204ENST00000430321 ATP2B3Q16720 1220 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 DCPSQ96C86 337 aaKnown RBP6.83□□□□□ -1.32
UBR3-204ENST00000430321 GOPCQ9HD26 462 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 SSBP05455 408 aaKnown RBP eCLIP6.83□□□□□ -1.32
UBR3-204ENST00000430321 IFI16Q16666 785 aaKnown RBP6.83□□□□□ -1.32
UBR3-204ENST00000430321 HSP90B2PQ58FF3 399 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 LARGE2Q8N3Y3 721 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 SMARCC2Q8TAQ2 1214 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 LZTS2Q9BRK4 669 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 MAP3K2Q9Y2U5 619 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 SENP3-EIF4A1A0A087X0R7 540 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 GOLIM4O00461 696 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 FLIIQ13045 1269 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 TAF12Q16514 161 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 CHD1LQ86WJ1 897 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 PLVAPQ9BX97 442 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 IMPG2Q9BZV3 1241 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 ECHDC1Q9NTX5 307 aa6.83□□□□□ -1.32
UBR3-204ENST00000430321 NR1I2O75469 434 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 ANAPC15P60006 121 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 CCDC91Q7Z6B0 441 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 PRKAG2Q9UGJ0 569 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 POLR3AO14802 1390 aaPredicted RBP6.82□□□□□ -1.32
UBR3-204ENST00000430321 HECW2Q9P2P5 1572 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 GOLGA6L10A6NI86 522 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 IFIT3O14879 490 aaKnown RBP6.82□□□□□ -1.32
UBR3-204ENST00000430321 PRPHP41219 470 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 PPM1FP49593 454 aaPredicted RBP6.82□□□□□ -1.32
UBR3-204ENST00000430321 DPP8Q6V1X1 898 aaPredicted RBP6.82□□□□□ -1.32
UBR3-204ENST00000430321 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.82□□□□□ -1.324e-7■■■□□ 15.2
UBR3-204ENST00000430321 DNMT1P26358 1616 aaKnown RBP6.82□□□□□ -1.32
UBR3-204ENST00000430321 STX6O43752 255 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 ATP2B4P23634 1241 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 TRIM5Q9C035 493 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 ADGBQ8N7X0 1667 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 CCDC192P0DO97 292 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 PPP2R5BQ15173 497 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 ARMC9Q7Z3E5 817 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 RRP36Q96EU6 259 aaKnown RBP6.82□□□□□ -1.32
UBR3-204ENST00000430321 ZBTB3Q9H5J0 574 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 VEZTQ9HBM0 779 aa6.82□□□□□ -1.32
UBR3-204ENST00000430321 MAGEB6P1A0A0J9YX57 407 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 MCM3P25205 808 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 KIF4BQ2VIQ3 1234 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 CCDC181Q5TID7 509 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 EXOC8Q8IYI6 725 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 QTRT2Q9H974 415 aaKnown RBP6.81□□□□□ -1.32
UBR3-204ENST00000430321 ZNF219Q9P2Y4 722 aaPredicted RBP6.81□□□□□ -1.32
UBR3-204ENST00000430321 UGGT1Q9NYU2 1555 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 SPATA31A6Q5VVP1 1343 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 PDE4AP27815 886 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 GNA11P29992 359 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 HSPA2P54652 639 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 CHRNA2Q15822 529 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 SH3TC1Q8TE82 1336 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 ANKARQ7Z5J8 1434 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 ARHGEF37A1IGU5 675 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 SPDYE3A6NKU9 549 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 PDE8AO60658 829 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 NOM1Q5C9Z4 860 aaKnown RBP6.81□□□□□ -1.32
UBR3-204ENST00000430321 LINS1Q8NG48 757 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 SREK1Q8WXA9 508 aaKnown RBP6.81□□□□□ -1.32
UBR3-204ENST00000430321 KRT13P13646 458 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 OSBPP22059 807 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 NEK4P51957 841 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 SLC8A3P57103 927 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 CCDC191Q8NCU4 936 aa6.81□□□□□ -1.32
UBR3-204ENST00000430321 GABPB2Q8TAK5 448 aaPredicted RBP6.81□□□□□ -1.32
UBR3-204ENST00000430321 MROH5Q6ZUA9 1318 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 GRIN3BO60391 1043 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 GPTP24298 496 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 LARP1BQ659C4 914 aaKnown RBP6.8□□□□□ -1.32
UBR3-204ENST00000430321 CCDC83Q8IWF9 413 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 ACSBG1Q96GR2 724 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 CCDC94Q9BW85 323 aaPredicted RBP6.8□□□□□ -1.32
UBR3-204ENST00000430321 SCAND2PQ9GZW5 306 aaPredicted RBP6.8□□□□□ -1.32
UBR3-204ENST00000430321 PARD3Q8TEW0 1356 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 IRS4O14654 1257 aaPredicted RBP6.8□□□□□ -1.32
UBR3-204ENST00000430321 CYP7A1P22680 504 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 ABCD1P33897 745 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 ME1P48163 572 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 SUPT20HL1Q3ZLR7 823 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 CCAR2Q8N163 923 aaKnown RBP6.8□□□□□ -1.32
UBR3-204ENST00000430321 PLBD2Q8NHP8 589 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 TSNARE1Q96NA8 513 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 TAOK3Q9H2K8 898 aa6.8□□□□□ -1.32
UBR3-204ENST00000430321 GJA3Q9Y6H8 435 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms