RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 LMBRD1Q9NUN5 540 aa19.5■□□□□ 0.71
MBD4-203ENST00000429544 KLHL40Q2TBA0 621 aa19.49■□□□□ 0.71
MBD4-203ENST00000429544 SLC4A9Q96Q91 983 aa19.49■□□□□ 0.71
MBD4-203ENST00000429544 TM6SF1Q9BZW5 370 aa19.49■□□□□ 0.71
MBD4-203ENST00000429544 PDRG1Q9NUG6 133 aa19.49■□□□□ 0.71
MBD4-203ENST00000429544 ZNF609O15014 1411 aa19.49■□□□□ 0.71
MBD4-203ENST00000429544 SLC27A2O14975 620 aa19.49■□□□□ 0.71
MBD4-203ENST00000429544 ZSWIM6Q9HCJ5 1215 aa19.49■□□□□ 0.71
MBD4-203ENST00000429544 CYP46A1Q9Y6A2 500 aa19.49■□□□□ 0.71
MBD4-203ENST00000429544 PHLPP1O60346 1717 aa19.49■□□□□ 0.71
MBD4-203ENST00000429544 MAP3K15Q6ZN16 1313 aa19.49■□□□□ 0.71
MBD4-203ENST00000429544 DDX46Q7L014 1031 aaKnown RBP19.48■□□□□ 0.71
MBD4-203ENST00000429544 PUS3Q9BZE2 481 aaKnown RBP19.48■□□□□ 0.71
MBD4-203ENST00000429544 RFX7Q2KHR2 1363 aa19.48■□□□□ 0.71
MBD4-203ENST00000429544 ANKRD36CQ5JPF3 1778 aa19.48■□□□□ 0.71
MBD4-203ENST00000429544 ADAMTS2O95450 1211 aa19.48■□□□□ 0.71
MBD4-203ENST00000429544 XRCC6P12956 609 aaKnown RBP eCLIP19.48■□□□□ 0.71
MBD4-203ENST00000429544 TIMM10P62072 90 aa19.48■□□□□ 0.71
MBD4-203ENST00000429544 TRIM28Q13263 835 aaKnown RBP19.48■□□□□ 0.71
MBD4-203ENST00000429544 VPS53Q5VIR6 699 aa19.48■□□□□ 0.71
MBD4-203ENST00000429544 FAM89AQ96GI7 184 aa19.48■□□□□ 0.71
MBD4-203ENST00000429544 GPR108Q9NPR9 543 aa19.48■□□□□ 0.71
MBD4-203ENST00000429544 JCADQ9P266 1359 aa19.48■□□□□ 0.71
MBD4-203ENST00000429544 LARGE1O95461 756 aa19.47■□□□□ 0.71
MBD4-203ENST00000429544 PCCAP05165 728 aaPredicted RBP19.47■□□□□ 0.71
MBD4-203ENST00000429544 CYP19A1P11511 503 aaPredicted RBP19.47■□□□□ 0.71
MBD4-203ENST00000429544 NRAPQ86VF7 1730 aa19.47■□□□□ 0.71
MBD4-203ENST00000429544 CIAO1O76071 339 aa19.47■□□□□ 0.71
MBD4-203ENST00000429544 CHGBP05060 677 aa19.47■□□□□ 0.71
MBD4-203ENST00000429544 HLFQ16534 295 aa19.47■□□□□ 0.71
MBD4-203ENST00000429544 CCDC85AQ96PX6 553 aaPredicted RBP19.47■□□□□ 0.71
MBD4-203ENST00000429544 PRPF40AO75400 957 aaKnown RBP19.46■□□□□ 0.71
MBD4-203ENST00000429544 GPTP24298 496 aa19.46■□□□□ 0.71
MBD4-203ENST00000429544 CCDC57Q2TAC2 916 aa19.46■□□□□ 0.71
MBD4-203ENST00000429544 GIGYF2Q6Y7W6 1299 aaKnown RBP19.46■□□□□ 0.71
MBD4-203ENST00000429544 RPAP1Q9BWH6 1393 aaPredicted RBP19.46■□□□□ 0.71
MBD4-203ENST00000429544 LTBP4Q8N2S1 1624 aa19.46■□□□□ 0.71
MBD4-203ENST00000429544 TAF5LO75529 589 aa19.46■□□□□ 0.71
MBD4-203ENST00000429544 NCLP19338 710 aaKnown RBP19.46■□□□□ 0.71
MBD4-203ENST00000429544 ZBTB1Q9Y2K1 713 aa19.46■□□□□ 0.71
MBD4-203ENST00000429544 PRIM1P49642 420 aaKnown RBP19.45■□□□□ 0.7
MBD4-203ENST00000429544 RNF20Q5VTR2 975 aa19.45■□□□□ 0.7
MBD4-203ENST00000429544 CCDC129Q6ZRS4 1044 aa19.45■□□□□ 0.7
MBD4-203ENST00000429544 ZBTB38Q8NAP3 1195 aaPredicted RBP19.45■□□□□ 0.7
MBD4-203ENST00000429544 TAF6LQ9Y6J9 622 aa19.45■□□□□ 0.7
MBD4-203ENST00000429544 NUP98P52948 1817 aa19.45■□□□□ 0.7
MBD4-203ENST00000429544 A0A1B0GUL7 405 aa19.44■□□□□ 0.7
MBD4-203ENST00000429544 MRE11P49959 708 aa19.44■□□□□ 0.7
MBD4-203ENST00000429544 SYNE4Q8N205 404 aa19.44■□□□□ 0.7
MBD4-203ENST00000429544 KBTBD3Q8NAB2 608 aa19.44■□□□□ 0.7
MBD4-203ENST00000429544 SEC62Q99442 399 aaKnown RBP19.44■□□□□ 0.7
MBD4-203ENST00000429544 A0A0G2JS52 829 aa19.44■□□□□ 0.7
MBD4-203ENST00000429544 GOLIM4O00461 696 aa19.44■□□□□ 0.7
MBD4-203ENST00000429544 GAS2L3Q86XJ1 694 aa19.44■□□□□ 0.7
MBD4-203ENST00000429544 PANK2Q9BZ23 570 aa19.44■□□□□ 0.7
MBD4-203ENST00000429544 PAG1Q9NWQ8 432 aa19.44■□□□□ 0.7
MBD4-203ENST00000429544 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.44■□□□□ 0.7
MBD4-203ENST00000429544 PALLDQ8WX93 1383 aa19.43■□□□□ 0.7
MBD4-203ENST00000429544 WDR33Q9C0J8 1336 aaKnown RBP19.43■□□□□ 0.7
MBD4-203ENST00000429544 PSMA5P28066 241 aa19.43■□□□□ 0.7
MBD4-203ENST00000429544 COL9A3Q14050 684 aaPredicted RBP19.43■□□□□ 0.7
MBD4-203ENST00000429544 CCDC83Q8IWF9 413 aa19.43■□□□□ 0.7
MBD4-203ENST00000429544 PLA2G12BQ9BX93 195 aa19.43■□□□□ 0.7
MBD4-203ENST00000429544 GRPEL1Q9HAV7 217 aa19.43■□□□□ 0.7
MBD4-203ENST00000429544 CEP126Q9P2H0 1117 aa19.43■□□□□ 0.7
MBD4-203ENST00000429544 ISY1Q9ULR0 285 aaKnown RBP19.43■□□□□ 0.7
MBD4-203ENST00000429544 MYH3P11055 1940 aa19.43■□□□□ 0.7
MBD4-203ENST00000429544 TAF7LQ5H9L4 462 aa19.43■□□□□ 0.7
MBD4-203ENST00000429544 NLRP10Q86W26 655 aa19.43■□□□□ 0.7
MBD4-203ENST00000429544 SMC3Q9UQE7 1217 aa19.43■□□□□ 0.7
MBD4-203ENST00000429544 SPATA31A1Q5TZJ5 1347 aa19.42■□□□□ 0.7
MBD4-203ENST00000429544 CAVIN1Q6NZI2 390 aaKnown RBP19.42■□□□□ 0.7
MBD4-203ENST00000429544 ZSCAN31Q96LW9 406 aaPredicted RBP19.42■□□□□ 0.7
MBD4-203ENST00000429544 IFIT1P09914 478 aaKnown RBP19.42■□□□□ 0.7
MBD4-203ENST00000429544 MCMDC2Q4G0Z9 681 aa19.42■□□□□ 0.7
MBD4-203ENST00000429544 HSP90AB3PQ58FF7 597 aa19.42■□□□□ 0.7
MBD4-203ENST00000429544 BLOC1S2Q6QNY1 142 aa19.42■□□□□ 0.7
MBD4-203ENST00000429544 SH2B1Q9NRF2 756 aaPredicted RBP19.42■□□□□ 0.7
MBD4-203ENST00000429544 HMG20BQ9P0W2 317 aa19.42■□□□□ 0.7
MBD4-203ENST00000429544 CDHR2Q9BYE9 1310 aa19.41■□□□□ 0.7
MBD4-203ENST00000429544 CSF1RP07333 972 aa19.41■□□□□ 0.7
MBD4-203ENST00000429544 FOXD4L6Q3SYB3 417 aaPredicted RBP19.41■□□□□ 0.7
MBD4-203ENST00000429544 FOXD4L3Q6VB84 417 aaPredicted RBP19.41■□□□□ 0.7
MBD4-203ENST00000429544 GPT2Q8TD30 523 aa19.41■□□□□ 0.7
MBD4-203ENST00000429544 IFIT5Q13325 482 aaKnown RBP19.41■□□□□ 0.7
MBD4-203ENST00000429544 DDB1Q16531 1140 aa19.41■□□□□ 0.7
MBD4-203ENST00000429544 USPL1Q5W0Q7 1092 aa19.41■□□□□ 0.7
MBD4-203ENST00000429544 TCEANC2Q96MN5 208 aa19.41■□□□□ 0.7
MBD4-203ENST00000429544 SPEF2Q9C093 1822 aa19.4■□□□□ 0.7
MBD4-203ENST00000429544 SH3TC1Q8TE82 1336 aa19.4■□□□□ 0.7
MBD4-203ENST00000429544 NUTM2BA6NNL0 878 aaPredicted RBP19.4■□□□□ 0.7
MBD4-203ENST00000429544 NUTM2EB1AL46 878 aaPredicted RBP19.4■□□□□ 0.7
MBD4-203ENST00000429544 ME3Q16798 604 aa19.4■□□□□ 0.7
MBD4-203ENST00000429544 SLFNL1Q499Z3 407 aa19.4■□□□□ 0.7
MBD4-203ENST00000429544 NUTM2AQ8IVF1 878 aaPredicted RBP19.4■□□□□ 0.7
MBD4-203ENST00000429544 CDCA7Q9BWT1 371 aaPredicted RBP19.4■□□□□ 0.7
MBD4-203ENST00000429544 TCHHQ07283 1943 aa19.4■□□□□ 0.7
MBD4-203ENST00000429544 DTNBO60941 627 aa19.4■□□□□ 0.7
MBD4-203ENST00000429544 RPS6KB1P23443 525 aa19.4■□□□□ 0.7
MBD4-203ENST00000429544 RTN4Q9NQC3 1192 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms