RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 A0A0D9SFI3 127 aa23.84■■□□□ 1.41
CASC4-203ENST00000429162 ZGPATQ8N5A5 531 aaKnown RBP23.84■■□□□ 1.41
CASC4-203ENST00000429162 INTS4Q96HW7 963 aaKnown RBP23.84■■□□□ 1.41
CASC4-203ENST00000429162 ZNF594Q96JF6 807 aaPredicted RBP23.84■■□□□ 1.41
CASC4-203ENST00000429162 CSF1RP07333 972 aa23.83■■□□□ 1.41
CASC4-203ENST00000429162 LRRC24Q50LG9 513 aa23.83■■□□□ 1.41
CASC4-203ENST00000429162 DZIP3Q86Y13 1208 aaKnown RBP23.83■■□□□ 1.41
CASC4-203ENST00000429162 RASEFQ8IZ41 740 aa23.83■■□□□ 1.41
CASC4-203ENST00000429162 JCADQ9P266 1359 aa23.83■■□□□ 1.41
CASC4-203ENST00000429162 A0A0G2JS52 829 aa23.82■■□□□ 1.4
CASC4-203ENST00000429162 CYP2E1P05181 493 aaPredicted RBP23.82■■□□□ 1.4
CASC4-203ENST00000429162 GPTP24298 496 aa23.82■■□□□ 1.4
CASC4-203ENST00000429162 ACSBG1Q96GR2 724 aa23.82■■□□□ 1.4
CASC4-203ENST00000429162 NEUROD6Q96NK8 337 aa23.82■■□□□ 1.4
CASC4-203ENST00000429162 DNAJC2Q99543 621 aaKnown RBP23.82■■□□□ 1.4
CASC4-203ENST00000429162 SPEF2Q9C093 1822 aa23.82■■□□□ 1.4
CASC4-203ENST00000429162 TRAK2O60296 914 aa23.81■■□□□ 1.4
CASC4-203ENST00000429162 KCNJ4P48050 445 aa23.81■■□□□ 1.4
CASC4-203ENST00000429162 IFIT5Q13325 482 aaKnown RBP23.81■■□□□ 1.4
CASC4-203ENST00000429162 TAF7LQ5H9L4 462 aa23.81■■□□□ 1.4
CASC4-203ENST00000429162 PRPF40BQ6NWY9 871 aaKnown RBP23.81■■□□□ 1.4
CASC4-203ENST00000429162 TICAM2Q86XR7 235 aa23.81■■□□□ 1.4
CASC4-203ENST00000429162 MAP4K1Q92918 833 aa23.81■■□□□ 1.4
CASC4-203ENST00000429162 TM6SF1Q9BZW5 370 aa23.81■■□□□ 1.4
CASC4-203ENST00000429162 CCDC87Q9NVE4 849 aa23.81■■□□□ 1.4
CASC4-203ENST00000429162 CEP126Q9P2H0 1117 aa23.81■■□□□ 1.4
CASC4-203ENST00000429162 RBM8AQ9Y5S9 174 aaKnown RBP23.81■■□□□ 1.4
CASC4-203ENST00000429162 UBAP1LF5GYI3 381 aa23.8■■□□□ 1.4
CASC4-203ENST00000429162 GOLGA6L22H0YM25 854 aa23.8■■□□□ 1.4
CASC4-203ENST00000429162 ZKSCAN1P17029 563 aaPredicted RBP23.8■■□□□ 1.4
CASC4-203ENST00000429162 NECTIN1Q15223 517 aa23.8■■□□□ 1.4
CASC4-203ENST00000429162 EDC3Q96F86 508 aaKnown RBP23.8■■□□□ 1.4
CASC4-203ENST00000429162 TTC14Q96N46 770 aa23.8■■□□□ 1.4
CASC4-203ENST00000429162 MYH3P11055 1940 aa23.8■■□□□ 1.4
CASC4-203ENST00000429162 PALLDQ8WX93 1383 aa23.8■■□□□ 1.4
CASC4-203ENST00000429162 NOL8Q76FK4 1167 aaKnown RBP23.8■■□□□ 1.4
CASC4-203ENST00000429162 AKAP2Q9Y2D5 859 aa23.8■■□□□ 1.4
CASC4-203ENST00000429162 A0A1B0GUL7 405 aa23.79■■□□□ 1.4
CASC4-203ENST00000429162 ATP6V1AP38606 617 aa23.79■■□□□ 1.4
CASC4-203ENST00000429162 PUS3Q9BZE2 481 aaKnown RBP23.79■■□□□ 1.4
CASC4-203ENST00000429162 LOC102724428A0A0B4J2F2 783 aa23.78■■□□□ 1.4
CASC4-203ENST00000429162 EIF5P55010 431 aaKnown RBP23.78■■□□□ 1.4
CASC4-203ENST00000429162 SIK1P57059 783 aa23.78■■□□□ 1.4
CASC4-203ENST00000429162 KBTBD3Q8NAB2 608 aa23.78■■□□□ 1.4
CASC4-203ENST00000429162 SMARCC1Q92922 1105 aaPredicted RBP23.78■■□□□ 1.4
CASC4-203ENST00000429162 CASTP20810 708 aaKnown RBP23.78■■□□□ 1.4
CASC4-203ENST00000429162 CTSWP56202 376 aa23.78■■□□□ 1.4
CASC4-203ENST00000429162 RNF20Q5VTR2 975 aa23.78■■□□□ 1.4
CASC4-203ENST00000429162 CREB3L3Q68CJ9 461 aa23.78■■□□□ 1.4
CASC4-203ENST00000429162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.78■■□□□ 1.4
CASC4-203ENST00000429162 TRMT112Q9UI30 125 aaKnown RBP23.78■■□□□ 1.4
CASC4-203ENST00000429162 TBC1D2BQ9UPU7 963 aa23.78■■□□□ 1.4
CASC4-203ENST00000429162 ZNF831Q5JPB2 1677 aa23.77■■□□□ 1.4
CASC4-203ENST00000429162 TIMM10P62072 90 aa23.77■■□□□ 1.4
CASC4-203ENST00000429162 INTS5Q6P9B9 1019 aaKnown RBP23.77■■□□□ 1.4
CASC4-203ENST00000429162 JAKMIP1Q96N16 626 aaKnown RBP23.77■■□□□ 1.4
CASC4-203ENST00000429162 IRS4O14654 1257 aaPredicted RBP23.76■■□□□ 1.39
CASC4-203ENST00000429162 BAG4O95429 457 aaKnown RBP23.76■■□□□ 1.39
CASC4-203ENST00000429162 CRKLP46109 303 aaKnown RBP23.76■■□□□ 1.39
CASC4-203ENST00000429162 VPS72Q15906 364 aa23.76■■□□□ 1.39
CASC4-203ENST00000429162 SKOR2Q2VWA4 1001 aaPredicted RBP23.76■■□□□ 1.39
CASC4-203ENST00000429162 DDX46Q7L014 1031 aaKnown RBP23.76■■□□□ 1.39
CASC4-203ENST00000429162 ZNF34Q8IZ26 560 aa23.76■■□□□ 1.39
CASC4-203ENST00000429162 PAG1Q9NWQ8 432 aa23.76■■□□□ 1.39
CASC4-203ENST00000429162 AK2P54819 239 aa23.76■■□□□ 1.39
CASC4-203ENST00000429162 RIC1Q4ADV7 1423 aa23.76■■□□□ 1.39
CASC4-203ENST00000429162 ZSWIM6Q9HCJ5 1215 aa23.76■■□□□ 1.39
CASC4-203ENST00000429162 CYP46A1Q9Y6A2 500 aa23.76■■□□□ 1.39
CASC4-203ENST00000429162 COL5A3P25940 1745 aaPredicted RBP23.75■■□□□ 1.39
CASC4-203ENST00000429162 SLC27A2O14975 620 aa23.75■■□□□ 1.39
CASC4-203ENST00000429162 VPS53Q5VIR6 699 aa23.75■■□□□ 1.39
CASC4-203ENST00000429162 ZNF589Q86UQ0 364 aaPredicted RBP23.75■■□□□ 1.39
CASC4-203ENST00000429162 TTLL11Q8NHH1 800 aa23.75■■□□□ 1.39
CASC4-203ENST00000429162 CCDC85AQ96PX6 553 aaPredicted RBP23.75■■□□□ 1.39
CASC4-203ENST00000429162 HMG20BQ9P0W2 317 aa23.75■■□□□ 1.39
CASC4-203ENST00000429162 NDUFB9Q9Y6M9 179 aa23.75■■□□□ 1.39
CASC4-203ENST00000429162 RPAP1Q9BWH6 1393 aaPredicted RBP23.75■■□□□ 1.39
CASC4-203ENST00000429162 BCL9LQ86UU0 1499 aa23.75■■□□□ 1.39
CASC4-203ENST00000429162 UBN2Q6ZU65 1347 aa23.75■■□□□ 1.39
CASC4-203ENST00000429162 SH3TC1Q8TE82 1336 aa23.75■■□□□ 1.39
CASC4-203ENST00000429162 ANKRD18BA2A2Z9 1011 aa23.74■■□□□ 1.39
CASC4-203ENST00000429162 PDE8AO60658 829 aa23.74■■□□□ 1.39
CASC4-203ENST00000429162 IFIT1P09914 478 aaKnown RBP23.74■■□□□ 1.39
CASC4-203ENST00000429162 PSMA5P28066 241 aa23.74■■□□□ 1.39
CASC4-203ENST00000429162 AK7Q96M32 723 aa23.74■■□□□ 1.39
CASC4-203ENST00000429162 LIMCH1Q9UPQ0 1083 aa23.74■■□□□ 1.39
CASC4-203ENST00000429162 LRP5O75197 1615 aa23.74■■□□□ 1.39
CASC4-203ENST00000429162 TAF5LO75529 589 aa23.74■■□□□ 1.39
CASC4-203ENST00000429162 ITGA6P23229 1130 aa23.74■■□□□ 1.39
CASC4-203ENST00000429162 NGLY1Q96IV0 654 aa23.74■■□□□ 1.39
CASC4-203ENST00000429162 C8orf37Q96NL8 207 aa23.74■■□□□ 1.39
CASC4-203ENST00000429162 GOLIM4O00461 696 aa23.73■■□□□ 1.39
CASC4-203ENST00000429162 ITPK1Q13572 414 aa23.73■■□□□ 1.39
CASC4-203ENST00000429162 PKP1Q13835 747 aa23.73■■□□□ 1.39
CASC4-203ENST00000429162 FAM98CQ17RN3 349 aaKnown RBP23.73■■□□□ 1.39
CASC4-203ENST00000429162 MCMDC2Q4G0Z9 681 aa23.73■■□□□ 1.39
CASC4-203ENST00000429162 SYNE4Q8N205 404 aa23.73■■□□□ 1.39
CASC4-203ENST00000429162 GREM2Q9H772 168 aa23.73■■□□□ 1.39
CASC4-203ENST00000429162 PDRG1Q9NUG6 133 aa23.73■■□□□ 1.39
CASC4-203ENST00000429162 ABCC12Q96J65 1359 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms