RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 OVOS2A0A0J9YW53 1432 aa14.74□□□□□ -0.05
CDH3-202ENST00000429102 OVOS2Q6IE36 1432 aa14.74□□□□□ -0.05
CDH3-202ENST00000429102 TERF1P54274 439 aa14.74□□□□□ -0.05
CDH3-202ENST00000429102 DDX17Q92841 729 aaKnown RBP14.74□□□□□ -0.05
CDH3-202ENST00000429102 ORAI2Q96SN7 254 aa14.74□□□□□ -0.05
CDH3-202ENST00000429102 GOLIM4O00461 696 aa14.73□□□□□ -0.05
CDH3-202ENST00000429102 GJB4Q9NTQ9 266 aa14.73□□□□□ -0.05
CDH3-202ENST00000429102 PGBD1Q96JS3 809 aa14.73□□□□□ -0.05
CDH3-202ENST00000429102 SDF4Q9BRK5 362 aa14.73□□□□□ -0.05
CDH3-202ENST00000429102 GPHNQ9NQX3 736 aaPredicted RBP14.73□□□□□ -0.05
CDH3-202ENST00000429102 PPP6R1Q9UPN7 881 aa14.73□□□□□ -0.05
CDH3-202ENST00000429102 TTC21AQ8NDW8 1320 aa14.73□□□□□ -0.05
CDH3-202ENST00000429102 CDC42BPGQ6DT37 1551 aa14.73□□□□□ -0.05
CDH3-202ENST00000429102 TMX1Q9H3N1 280 aa14.73□□□□□ -0.05
CDH3-202ENST00000429102 ADCY9O60503 1353 aa14.73□□□□□ -0.05
CDH3-202ENST00000429102 GIGYF1O75420 1035 aaPredicted RBP14.72□□□□□ -0.05
CDH3-202ENST00000429102 SF3A1Q15459 793 aaKnown RBP14.72□□□□□ -0.05
CDH3-202ENST00000429102 ZRSR1Q15695 479 aaKnown RBP14.72□□□□□ -0.05
CDH3-202ENST00000429102 CCDC144BQ3MJ40 725 aa14.72□□□□□ -0.05
CDH3-202ENST00000429102 CCDC144CPQ8IYA2 1237 aa14.72□□□□□ -0.05
CDH3-202ENST00000429102 CACTINQ8WUQ7 758 aaKnown RBP14.72□□□□□ -0.05
CDH3-202ENST00000429102 PRIMPOLQ96LW4 560 aa14.72□□□□□ -0.05
CDH3-202ENST00000429102 NEK1Q96PY6 1258 aa14.72□□□□□ -0.05
CDH3-202ENST00000429102 RPS6KB1P23443 525 aa14.72□□□□□ -0.05
CDH3-202ENST00000429102 TOB2Q14106 344 aaPredicted RBP14.72□□□□□ -0.05
CDH3-202ENST00000429102 PDCP20941 246 aa14.72□□□□□ -0.05
CDH3-202ENST00000429102 FAM177A1Q8N128 213 aaPredicted RBP14.72□□□□□ -0.05
CDH3-202ENST00000429102 MAP4K1Q92918 833 aa14.72□□□□□ -0.05
CDH3-202ENST00000429102 USP27XA6NNY8 438 aa14.71□□□□□ -0.05
CDH3-202ENST00000429102 FKBP4Q02790 459 aaKnown RBP eCLIP14.71□□□□□ -0.05
CDH3-202ENST00000429102 CCAR1Q8IX12 1150 aaKnown RBP14.71□□□□□ -0.05
CDH3-202ENST00000429102 CABLES1Q8TDN4 633 aa14.71□□□□□ -0.05
CDH3-202ENST00000429102 KAZALD1Q96I82 304 aa14.71□□□□□ -0.05
CDH3-202ENST00000429102 FUCA2Q9BTY2 467 aa14.71□□□□□ -0.05
CDH3-202ENST00000429102 TTC41PQ6P2S7 1318 aa14.71□□□□□ -0.05
CDH3-202ENST00000429102 A0A0G2JS52 829 aa14.71□□□□□ -0.05
CDH3-202ENST00000429102 RNMTO43148 476 aaKnown RBP14.71□□□□□ -0.05
CDH3-202ENST00000429102 HTATSF1O43719 755 aaKnown RBP14.71□□□□□ -0.05
CDH3-202ENST00000429102 DDX58O95786 925 aaKnown RBP14.71□□□□□ -0.05
CDH3-202ENST00000429102 C11orf57Q6ZUT1 292 aaPredicted RBP14.71□□□□□ -0.05
CDH3-202ENST00000429102 TTLL5Q6EMB2 1281 aa14.7□□□□□ -0.06
CDH3-202ENST00000429102 ERC1Q8IUD2 1116 aa14.7□□□□□ -0.06
CDH3-202ENST00000429102 ANKRD24Q8TF21 1146 aa14.7□□□□□ -0.06
CDH3-202ENST00000429102 ZNF594Q96JF6 807 aaPredicted RBP14.7□□□□□ -0.06
CDH3-202ENST00000429102 SCAND2PQ9GZW5 306 aaPredicted RBP14.7□□□□□ -0.06
CDH3-202ENST00000429102 SSH2Q76I76 1423 aa14.7□□□□□ -0.06
CDH3-202ENST00000429102 A0A087WZG4 1122 aa14.7□□□□□ -0.06
CDH3-202ENST00000429102 A0A1B0GVL5 298 aa14.7□□□□□ -0.06
CDH3-202ENST00000429102 CHRNA2Q15822 529 aa14.7□□□□□ -0.06
CDH3-202ENST00000429102 TMEM87AQ8NBN3 555 aa14.7□□□□□ -0.06
CDH3-202ENST00000429102 CCDC112Q8NEF3 446 aa14.7□□□□□ -0.06
CDH3-202ENST00000429102 ANKRD26Q9UPS8 1709 aa14.7□□□□□ -0.06
CDH3-202ENST00000429102 SMC2O95347 1197 aa14.7□□□□□ -0.06
CDH3-202ENST00000429102 PODXL2Q9NZ53 605 aa14.7□□□□□ -0.06
CDH3-202ENST00000429102 DBNLQ9UJU6 430 aaKnown RBP14.7□□□□□ -0.06
CDH3-202ENST00000429102 IGKV5-2P06315 115 aa14.69□□□□□ -0.06
CDH3-202ENST00000429102 AXIN2Q9Y2T1 843 aa14.69□□□□□ -0.06
CDH3-202ENST00000429102 AOX1Q06278 1338 aa14.69□□□□□ -0.06
CDH3-202ENST00000429102 WASHC4Q2M389 1173 aa14.69□□□□□ -0.06
CDH3-202ENST00000429102 ZSCAN25Q6NSZ9 544 aa14.69□□□□□ -0.06
CDH3-202ENST00000429102 MTERF4Q7Z6M4 381 aaKnown RBP14.69□□□□□ -0.06
CDH3-202ENST00000429102 TRERF1Q96PN7 1200 aa14.69□□□□□ -0.06
CDH3-202ENST00000429102 CLTCQ00610 1675 aaKnown RBP14.69□□□□□ -0.06
CDH3-202ENST00000429102 PTPRUQ92729 1446 aa14.69□□□□□ -0.06
CDH3-202ENST00000429102 CYP21A2P08686 494 aa14.68□□□□□ -0.06
CDH3-202ENST00000429102 RXRAP19793 462 aa14.68□□□□□ -0.06
CDH3-202ENST00000429102 ZNF75DP51815 510 aa14.68□□□□□ -0.06
CDH3-202ENST00000429102 CCDC73Q6ZRK6 1079 aa14.68□□□□□ -0.06
CDH3-202ENST00000429102 IP6K1Q92551 441 aa14.68□□□□□ -0.06
CDH3-202ENST00000429102 PRDM4Q9UKN5 801 aa14.68□□□□□ -0.06
CDH3-202ENST00000429102 FSIP1Q8NA03 581 aa14.68□□□□□ -0.06
CDH3-202ENST00000429102 LINS1Q8NG48 757 aa14.68□□□□□ -0.06
CDH3-202ENST00000429102 KINO60870 393 aaKnown RBP14.68□□□□□ -0.06
CDH3-202ENST00000429102 TAF5LO75529 589 aa14.68□□□□□ -0.06
CDH3-202ENST00000429102 SCRN1Q12765 414 aa14.68□□□□□ -0.06
CDH3-202ENST00000429102 LMBR1LQ6UX01 489 aa14.68□□□□□ -0.06
CDH3-202ENST00000429102 AOPEPQ8N6M6 819 aa14.68□□□□□ -0.06
CDH3-202ENST00000429102 AKAP4Q5JQC9 854 aa14.67□□□□□ -0.06
CDH3-202ENST00000429102 USP28Q96RU2 1077 aa14.67□□□□□ -0.06
CDH3-202ENST00000429102 KDRP35968 1356 aa14.67□□□□□ -0.06
CDH3-202ENST00000429102 USP31Q70CQ4 1352 aa14.67□□□□□ -0.06
CDH3-202ENST00000429102 GCP02774 474 aa14.67□□□□□ -0.06
CDH3-202ENST00000429102 SKILP12757 684 aa14.67□□□□□ -0.06
CDH3-202ENST00000429102 ERICH4A6NGS2 130 aa14.66□□□□□ -0.06
CDH3-202ENST00000429102 TTC5Q8N0Z6 440 aa14.66□□□□□ -0.06
CDH3-202ENST00000429102 RAPGEF4Q8WZA2 1011 aa14.66□□□□□ -0.06
CDH3-202ENST00000429102 ZNF496Q96IT1 587 aaPredicted RBP14.66□□□□□ -0.06
CDH3-202ENST00000429102 ZBTB3Q9H5J0 574 aa14.66□□□□□ -0.06
CDH3-202ENST00000429102 ADAMTS13Q76LX8 1427 aa14.66□□□□□ -0.06
CDH3-202ENST00000429102 NPHP3Q7Z494 1330 aa14.66□□□□□ -0.06
CDH3-202ENST00000429102 ATP2B1P20020 1258 aa14.66□□□□□ -0.06
CDH3-202ENST00000429102 ANKRD1Q15327 319 aa14.66□□□□□ -0.06
CDH3-202ENST00000429102 ANKRD13DQ6ZTN6 518 aa14.66□□□□□ -0.06
CDH3-202ENST00000429102 PTPDC1A2A3K4 754 aa14.65□□□□□ -0.06
CDH3-202ENST00000429102 GOLGA8FQ08AF8 430 aa14.65□□□□□ -0.06
CDH3-202ENST00000429102 GOLGA8DPQ0D2H9 430 aa14.65□□□□□ -0.06
CDH3-202ENST00000429102 SIRT1Q96EB6 747 aa14.65□□□□□ -0.06
CDH3-202ENST00000429102 CLSTN2Q9H4D0 955 aa14.65□□□□□ -0.06
CDH3-202ENST00000429102 MARCKSP29966 332 aaPredicted RBP14.65□□□□□ -0.06
CDH3-202ENST00000429102 CEP135Q66GS9 1140 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms