RNA–Protein interactions for RNA: ENST00000428835.5

HLA-DPB1-212, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-212ENST00000428835 IPO8O15397 1037 aaKnown RBP25.61■■□□□ 1.69
HLA-DPB1-212ENST00000428835 CASP7P55210 303 aa25.61■■□□□ 1.69
HLA-DPB1-212ENST00000428835 ARHGAP45Q92619 1136 aa25.61■■□□□ 1.69
HLA-DPB1-212ENST00000428835 CCDC85AQ96PX6 553 aaPredicted RBP25.61■■□□□ 1.69
HLA-DPB1-212ENST00000428835 CTSWP56202 376 aa25.6■■□□□ 1.69
HLA-DPB1-212ENST00000428835 CC2D2BQ6DHV5 1058 aa25.6■■□□□ 1.69
HLA-DPB1-212ENST00000428835 RTKN2Q8IZC4 609 aa25.6■■□□□ 1.69
HLA-DPB1-212ENST00000428835 FRAT1Q92837 279 aaPredicted RBP25.6■■□□□ 1.69
HLA-DPB1-212ENST00000428835 CHD4Q14839 1912 aa25.6■■□□□ 1.69
HLA-DPB1-212ENST00000428835 CACNA1SQ13698 1873 aa25.6■■□□□ 1.69
HLA-DPB1-212ENST00000428835 NFKBIEO00221 500 aa25.59■■□□□ 1.69
HLA-DPB1-212ENST00000428835 C9orf131Q5VYM1 1079 aa25.59■■□□□ 1.69
HLA-DPB1-212ENST00000428835 PLA2G12BQ9BX93 195 aa25.59■■□□□ 1.69
HLA-DPB1-212ENST00000428835 TAOK3Q9H2K8 898 aa25.59■■□□□ 1.69
HLA-DPB1-212ENST00000428835 LAMB2P55268 1798 aa25.59■■□□□ 1.69
HLA-DPB1-212ENST00000428835 TTLL11Q8NHH1 800 aa25.58■■□□□ 1.69
HLA-DPB1-212ENST00000428835 CELF1Q92879 486 aaKnown RBP25.58■■□□□ 1.69
HLA-DPB1-212ENST00000428835 ATP6V0A2Q9Y487 856 aa25.58■■□□□ 1.69
HLA-DPB1-212ENST00000428835 LMNB1P20700 586 aa25.57■■□□□ 1.68
HLA-DPB1-212ENST00000428835 CCT4P50991 539 aaKnown RBP25.57■■□□□ 1.68
HLA-DPB1-212ENST00000428835 SEC31BQ9NQW1 1179 aa25.57■■□□□ 1.68
HLA-DPB1-212ENST00000428835 RNF181Q9P0P0 153 aa25.57■■□□□ 1.68
HLA-DPB1-212ENST00000428835 RPS8P62241 208 aaKnown RBP25.56■■□□□ 1.68
HLA-DPB1-212ENST00000428835 GRIPAP1Q4V328 841 aa25.56■■□□□ 1.68
HLA-DPB1-212ENST00000428835 TMC4Q7Z404 712 aa25.56■■□□□ 1.68
HLA-DPB1-212ENST00000428835 SP8Q8IXZ3 490 aa25.56■■□□□ 1.68
HLA-DPB1-212ENST00000428835 LTBP3Q9NS15 1303 aa25.55■■□□□ 1.68
HLA-DPB1-212ENST00000428835 NBPF7P0C2Y1 421 aaPredicted RBP25.54■■□□□ 1.68
HLA-DPB1-212ENST00000428835 FKBP4Q02790 459 aaKnown RBP eCLIP25.54■■□□□ 1.68
HLA-DPB1-212ENST00000428835 ATF7IPQ6VMQ6 1270 aa25.54■■□□□ 1.68
HLA-DPB1-212ENST00000428835 SLC51AQ86UW1 340 aa25.54■■□□□ 1.68
HLA-DPB1-212ENST00000428835 GREM2Q9H772 168 aa25.54■■□□□ 1.68
HLA-DPB1-212ENST00000428835 TRIM27P14373 513 aa25.53■■□□□ 1.68
HLA-DPB1-212ENST00000428835 PRELPP51888 382 aa25.53■■□□□ 1.68
HLA-DPB1-212ENST00000428835 ZKSCAN2Q63HK3 967 aa25.53■■□□□ 1.68
HLA-DPB1-212ENST00000428835 CSF1RP07333 972 aa25.52■■□□□ 1.68
HLA-DPB1-212ENST00000428835 FOXO4P98177 505 aa25.52■■□□□ 1.68
HLA-DPB1-212ENST00000428835 ANKRD18AQ8IVF6 992 aa25.52■■□□□ 1.68
HLA-DPB1-212ENST00000428835 CDC5LQ99459 802 aaKnown RBP25.52■■□□□ 1.68
HLA-DPB1-212ENST00000428835 USP44Q9H0E7 712 aa25.52■■□□□ 1.68
HLA-DPB1-212ENST00000428835 UTYO14607 1347 aa25.52■■□□□ 1.68
HLA-DPB1-212ENST00000428835 SUCLG2Q96I99 432 aa25.51■■□□□ 1.67
HLA-DPB1-212ENST00000428835 PSMD1Q99460 953 aa25.51■■□□□ 1.67
HLA-DPB1-212ENST00000428835 ZNF277Q9NRM2 450 aaPredicted RBP25.51■■□□□ 1.67
HLA-DPB1-212ENST00000428835 CHMP3Q9Y3E7 222 aa25.51■■□□□ 1.67
HLA-DPB1-212ENST00000428835 FER1L6Q2WGJ9 1857 aa25.5■■□□□ 1.67
HLA-DPB1-212ENST00000428835 EPHA10Q5JZY3 1008 aa25.5■■□□□ 1.67
HLA-DPB1-212ENST00000428835 MPNDQ8N594 471 aa25.5■■□□□ 1.67
HLA-DPB1-212ENST00000428835 RTL9Q8NET4 1388 aa25.5■■□□□ 1.67
HLA-DPB1-212ENST00000428835 CLUAP1Q96AJ1 413 aa25.5■■□□□ 1.67
HLA-DPB1-212ENST00000428835 ITGA6P23229 1130 aa25.49■■□□□ 1.67
HLA-DPB1-212ENST00000428835 FAM161AQ3B820 660 aa25.49■■□□□ 1.67
HLA-DPB1-212ENST00000428835 LMBR1LQ6UX01 489 aa25.49■■□□□ 1.67
HLA-DPB1-212ENST00000428835 DPP8Q6V1X1 898 aaPredicted RBP25.49■■□□□ 1.67
HLA-DPB1-212ENST00000428835 TNNQ9UQP3 1299 aa25.49■■□□□ 1.67
HLA-DPB1-212ENST00000428835 TAF1P21675 1872 aa25.49■■□□□ 1.67
HLA-DPB1-212ENST00000428835 INTS3Q68E01 1043 aaKnown RBP25.48■■□□□ 1.67
HLA-DPB1-212ENST00000428835 RCAN3Q9UKA8 241 aa25.48■■□□□ 1.67
HLA-DPB1-212ENST00000428835 ANKRD18BA2A2Z9 1011 aa25.47■■□□□ 1.67
HLA-DPB1-212ENST00000428835 IGHMBP2P38935 993 aaKnown RBP25.47■■□□□ 1.67
HLA-DPB1-212ENST00000428835 IFIT5Q13325 482 aaKnown RBP25.47■■□□□ 1.67
HLA-DPB1-212ENST00000428835 ZNF784Q8NCA9 323 aaPredicted RBP25.47■■□□□ 1.67
HLA-DPB1-212ENST00000428835 NSFL1CQ9UNZ2 370 aaKnown RBP25.47■■□□□ 1.67
HLA-DPB1-212ENST00000428835 SNED1Q8TER0 1413 aa25.46■■□□□ 1.67
HLA-DPB1-212ENST00000428835 IARSP41252 1262 aaKnown RBP25.46■■□□□ 1.67
HLA-DPB1-212ENST00000428835 SUPT20HQ8NEM7 779 aa25.46■■□□□ 1.67
HLA-DPB1-212ENST00000428835 KAZALD1Q96I82 304 aa25.46■■□□□ 1.67
HLA-DPB1-212ENST00000428835 MYH3P11055 1940 aa25.45■■□□□ 1.67
HLA-DPB1-212ENST00000428835 SBF1O95248 1867 aa25.45■■□□□ 1.67
HLA-DPB1-212ENST00000428835 FTSJ3Q8IY81 847 aaKnown RBP25.45■■□□□ 1.66
HLA-DPB1-212ENST00000428835 BICC1Q9H694 974 aaKnown RBP25.45■■□□□ 1.66
HLA-DPB1-212ENST00000428835 BSDC1Q9NW68 430 aaPredicted RBP25.45■■□□□ 1.66
HLA-DPB1-212ENST00000428835 COL4A1P02462 1669 aa25.45■■□□□ 1.66
HLA-DPB1-212ENST00000428835 UBTFL1P0CB47 393 aaPredicted RBP25.44■■□□□ 1.66
HLA-DPB1-212ENST00000428835 GPSM2P81274 684 aa25.44■■□□□ 1.66
HLA-DPB1-212ENST00000428835 CCDC57Q2TAC2 916 aa25.44■■□□□ 1.66
HLA-DPB1-212ENST00000428835 MPHOSPH8Q99549 860 aa25.44■■□□□ 1.66
HLA-DPB1-212ENST00000428835 RTFDC1Q9BY42 306 aaPredicted RBP25.44■■□□□ 1.66
HLA-DPB1-212ENST00000428835 DZIP1LQ8IYY4 767 aaKnown RBP25.43■■□□□ 1.66
HLA-DPB1-212ENST00000428835 ZNF526Q8TF50 670 aaPredicted RBP25.43■■□□□ 1.66
HLA-DPB1-212ENST00000428835 ANKIB1Q9P2G1 1089 aa25.43■■□□□ 1.66
HLA-DPB1-212ENST00000428835 HDAC5Q9UQL6 1122 aa25.43■■□□□ 1.66
HLA-DPB1-212ENST00000428835 ZC3H4Q9UPT8 1303 aaKnown RBP25.42■■□□□ 1.66
HLA-DPB1-212ENST00000428835 TAF7LQ5H9L4 462 aa25.42■■□□□ 1.66
HLA-DPB1-212ENST00000428835 LARGE2Q8N3Y3 721 aa25.42■■□□□ 1.66
HLA-DPB1-212ENST00000428835 TMEM57Q8N5G2 664 aa25.42■■□□□ 1.66
HLA-DPB1-212ENST00000428835 C6orf229H3BNL8 230 aa25.41■■□□□ 1.66
HLA-DPB1-212ENST00000428835 PPIP5K2O43314 1243 aa25.41■■□□□ 1.66
HLA-DPB1-212ENST00000428835 RABL6Q3YEC7 729 aaPredicted RBP25.41■■□□□ 1.66
HLA-DPB1-212ENST00000428835 ANKRD44Q8N8A2 993 aa25.41■■□□□ 1.66
HLA-DPB1-212ENST00000428835 JDP2Q8WYK2 163 aa25.41■■□□□ 1.66
HLA-DPB1-212ENST00000428835 MEIS3Q99687 375 aa25.41■■□□□ 1.66
HLA-DPB1-212ENST00000428835 VPS33BQ9H267 617 aa25.41■■□□□ 1.66
HLA-DPB1-212ENST00000428835 MINPP1Q9UNW1 487 aa25.41■■□□□ 1.66
HLA-DPB1-212ENST00000428835 GNAI3P08754 354 aa25.4■■□□□ 1.66
HLA-DPB1-212ENST00000428835 CCDC88AQ3V6T2 1871 aa25.4■■□□□ 1.66
HLA-DPB1-212ENST00000428835 AOC3Q16853 763 aa25.39■■□□□ 1.66
HLA-DPB1-212ENST00000428835 GPBP1L1Q9HC44 474 aaPredicted RBP25.39■■□□□ 1.66
HLA-DPB1-212ENST00000428835 PODXL2Q9NZ53 605 aa25.39■■□□□ 1.66
HLA-DPB1-212ENST00000428835 POLLQ9UGP5 575 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms