RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 MKNK2Q9HBH9 465 aa8.67□□□□□ -1.02
CNOT4-206ENST00000428680 NSFL1CQ9UNZ2 370 aaKnown RBP8.67□□□□□ -1.02
CNOT4-206ENST00000428680 ADCY9O60503 1353 aa8.67□□□□□ -1.02
CNOT4-206ENST00000428680 TCIRG1Q13488 830 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 REM2Q8IYK8 340 aaPredicted RBP8.66□□□□□ -1.02
CNOT4-206ENST00000428680 ZNF710Q8N1W2 664 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 KIF13BQ9NQT8 1826 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 ARHGEF6Q15052 776 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 CLEC4GQ6UXB4 293 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 LARGE2Q8N3Y3 721 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 REC8O95072 547 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 HLA-DOAP06340 250 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 CA8P35219 290 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 TSR1Q2NL82 804 aaKnown RBP8.66□□□□□ -1.02
CNOT4-206ENST00000428680 ERICH6BQ5W0A0 696 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 STYK1Q6J9G0 422 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 AKAP2Q9Y2D5 859 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 LRRFIP2Q9Y608 721 aaKnown RBP8.66□□□□□ -1.02
CNOT4-206ENST00000428680 SHANK3Q9BYB0 1731 aa8.66□□□□□ -1.02
CNOT4-206ENST00000428680 GNAI2P04899 355 aa8.65□□□□□ -1.02
CNOT4-206ENST00000428680 SNRPA1P09661 255 aaKnown RBP8.65□□□□□ -1.02
CNOT4-206ENST00000428680 SLC5A1P13866 664 aa8.65□□□□□ -1.02
CNOT4-206ENST00000428680 COL23A1Q86Y22 540 aaPredicted RBP8.65□□□□□ -1.02
CNOT4-206ENST00000428680 PROM2Q8N271 834 aa8.65□□□□□ -1.02
CNOT4-206ENST00000428680 MYD88Q99836 296 aa8.65□□□□□ -1.02
CNOT4-206ENST00000428680 TAF1LQ8IZX4 1826 aa8.65□□□□□ -1.02
CNOT4-206ENST00000428680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.65□□□□□ -1.02
CNOT4-206ENST00000428680 ZNF827Q17R98 1081 aa8.65□□□□□ -1.02
CNOT4-206ENST00000428680 CNBD1Q8NA66 436 aa8.65□□□□□ -1.02
CNOT4-206ENST00000428680 KRT18P05783 430 aaKnown RBP8.65□□□□□ -1.03
CNOT4-206ENST00000428680 PPM1FP49593 454 aaPredicted RBP8.65□□□□□ -1.03
CNOT4-206ENST00000428680 FAM161AQ3B820 660 aa8.65□□□□□ -1.03
CNOT4-206ENST00000428680 CCDC152Q4G0S7 254 aa8.65□□□□□ -1.03
CNOT4-206ENST00000428680 CDK5RAP3Q96JB5 506 aa8.65□□□□□ -1.03
CNOT4-206ENST00000428680 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.65□□□□□ -1.038e-8■■■■■ 44.9
CNOT4-206ENST00000428680 ALDH1B1P30837 517 aa8.65□□□□□ -1.03
CNOT4-206ENST00000428680 ANKRD18AQ8IVF6 992 aa8.65□□□□□ -1.03
CNOT4-206ENST00000428680 CARMIL3Q8ND23 1372 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 BAG3O95817 575 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 CCT4P50991 539 aaKnown RBP8.64□□□□□ -1.03
CNOT4-206ENST00000428680 WDR70Q9NW82 654 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 NARFQ9UHQ1 456 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 F8W031 263 aaPredicted RBP8.64□□□□□ -1.03
CNOT4-206ENST00000428680 TNNI2P48788 182 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 LDHAL6AQ6ZMR3 332 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 RTKN2Q8IZC4 609 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 ATP2B1P20020 1258 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 IL6STP40189 918 aaPredicted RBP8.64□□□□□ -1.03
CNOT4-206ENST00000428680 TNIP1Q15025 636 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 ODF2Q5BJF6 829 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 FAM182BQ5T319 152 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 IL27Q8NEV9 243 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 UBAC1Q9BSL1 405 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 EMILIN1Q9Y6C2 1016 aa8.64□□□□□ -1.03
CNOT4-206ENST00000428680 CT47A1Q5JQC4 288 aaPredicted RBP8.63□□□□□ -1.03
CNOT4-206ENST00000428680 SLC52A2Q9HAB3 445 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 MIS18AQ9NYP9 233 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 ARFGEF1Q9Y6D6 1849 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 CDHR2Q9BYE9 1310 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 H7C1D1 291 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 MCM10Q7L590 875 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 CNTROBQ8N137 903 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 EYA1Q99502 592 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 POLKQ9UBT6 870 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 LMNB1P20700 586 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 KIF22Q14807 665 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 CCDC96Q2M329 555 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 SPTY2D1Q68D10 685 aaPredicted RBP8.63□□□□□ -1.03
CNOT4-206ENST00000428680 MSL1Q68DK7 614 aa8.63□□□□□ -1.03
CNOT4-206ENST00000428680 PCMTD1Q96MG8 357 aaPredicted RBP8.63□□□□□ -1.03
CNOT4-206ENST00000428680 DBF4Q9UBU7 674 aaPredicted RBP8.63□□□□□ -1.03
CNOT4-206ENST00000428680 EIF4A2Q14240 407 aaKnown RBP8.63□□□□□ -1.03
CNOT4-206ENST00000428680 ZNF444Q8N0Y2 327 aaPredicted RBP8.63□□□□□ -1.03
CNOT4-206ENST00000428680 UBR3Q6ZT12 1888 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 SRGAP3O43295 1099 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 DZIP3Q86Y13 1208 aaKnown RBP8.62□□□□□ -1.03
CNOT4-206ENST00000428680 HYPKQ9NX55 129 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 ITGB4P16144 1822 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 USP42Q9H9J4 1324 aaKnown RBP8.62□□□□□ -1.03
CNOT4-206ENST00000428680 HIP1O00291 1037 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 KDM4AO75164 1064 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 CAPN2P17655 700 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 MAP3K12Q12852 859 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 ANKRD20A12PQ8NF67 263 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 PIGBQ92521 554 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.62□□□□□ -1.03
CNOT4-206ENST00000428680 TRIM21P19474 475 aaKnown RBP8.62□□□□□ -1.03
CNOT4-206ENST00000428680 EXOSC9Q06265 439 aaKnown RBP8.62□□□□□ -1.03
CNOT4-206ENST00000428680 NFE2L2Q16236 605 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 NIM1KQ8IY84 436 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 TTLL6Q8N841 843 aa8.62□□□□□ -1.03
CNOT4-206ENST00000428680 COL5A3P25940 1745 aaPredicted RBP8.62□□□□□ -1.03
CNOT4-206ENST00000428680 CA12O43570 354 aa8.61□□□□□ -1.03
CNOT4-206ENST00000428680 PPP4R3AQ6IN85 833 aa8.61□□□□□ -1.03
CNOT4-206ENST00000428680 PNMA8AQ86V59 439 aaPredicted RBP8.61□□□□□ -1.03
CNOT4-206ENST00000428680 PRKRIP1Q9H875 184 aaPredicted RBP8.61□□□□□ -1.03
CNOT4-206ENST00000428680 ATP6V1DQ9Y5K8 247 aa8.61□□□□□ -1.03
CNOT4-206ENST00000428680 TPM3P06753 285 aa8.61□□□□□ -1.03
CNOT4-206ENST00000428680 NUP133Q8WUM0 1156 aa8.61□□□□□ -1.03
CNOT4-206ENST00000428680 SYAP1Q96A49 352 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms