RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 KLRG2A4D1S0 409 aaPredicted RBP15.53■□□□□ 0.08
TRIM39-207ENST00000428404 NUCB1Q02818 461 aa15.53■□□□□ 0.08
TRIM39-207ENST00000428404 FAM161AQ3B820 660 aa15.53■□□□□ 0.08
TRIM39-207ENST00000428404 GREM2Q9H772 168 aa15.53■□□□□ 0.08
TRIM39-207ENST00000428404 PA2G4Q9UQ80 394 aaKnown RBP15.53■□□□□ 0.08
TRIM39-207ENST00000428404 DDX60Q8IY21 1712 aaKnown RBP15.53■□□□□ 0.08
TRIM39-207ENST00000428404 SURF6O75683 361 aaKnown RBP15.52■□□□□ 0.08
TRIM39-207ENST00000428404 IFIT5Q13325 482 aaKnown RBP15.52■□□□□ 0.08
TRIM39-207ENST00000428404 R3HDM1Q15032 1099 aaKnown RBP15.52■□□□□ 0.08
TRIM39-207ENST00000428404 CCDC152Q4G0S7 254 aa15.52■□□□□ 0.08
TRIM39-207ENST00000428404 CCDC24Q8N4L8 307 aa15.52■□□□□ 0.08
TRIM39-207ENST00000428404 NLRP3Q96P20 1036 aa15.52■□□□□ 0.08
TRIM39-207ENST00000428404 EXOC6BQ9Y2D4 811 aa15.52■□□□□ 0.08
TRIM39-207ENST00000428404 PARP3Q9Y6F1 533 aa15.52■□□□□ 0.08
TRIM39-207ENST00000428404 LAMB2P55268 1798 aa15.52■□□□□ 0.07
TRIM39-207ENST00000428404 NRXN2Q9P2S2 1712 aa15.51■□□□□ 0.07
TRIM39-207ENST00000428404 RAB11FIP3O75154 756 aa15.51■□□□□ 0.07
TRIM39-207ENST00000428404 ITGA6P23229 1130 aa15.51■□□□□ 0.07
TRIM39-207ENST00000428404 ST5P78524 1137 aa15.51■□□□□ 0.07
TRIM39-207ENST00000428404 CCDC57Q2TAC2 916 aa15.51■□□□□ 0.07
TRIM39-207ENST00000428404 HSP90AB4PQ58FF6 505 aa15.51■□□□□ 0.07
TRIM39-207ENST00000428404 KLHDC4Q8TBB5 520 aa15.51■□□□□ 0.07
TRIM39-207ENST00000428404 PDZRN3Q9UPQ7 1066 aa15.51■□□□□ 0.07
TRIM39-207ENST00000428404 CHMP3Q9Y3E7 222 aa15.51■□□□□ 0.07
TRIM39-207ENST00000428404 ANKRD18BA2A2Z9 1011 aa15.5■□□□□ 0.07
TRIM39-207ENST00000428404 CRY2Q49AN0 593 aa15.5■□□□□ 0.07
TRIM39-207ENST00000428404 CCDC85AQ96PX6 553 aaPredicted RBP15.5■□□□□ 0.07
TRIM39-207ENST00000428404 BRIP1Q9BX63 1249 aa15.5■□□□□ 0.07
TRIM39-207ENST00000428404 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
TRIM39-207ENST00000428404 CASZ1Q86V15 1759 aa15.49■□□□□ 0.07
TRIM39-207ENST00000428404 MYH3P11055 1940 aa15.49■□□□□ 0.07
TRIM39-207ENST00000428404 NPHP1O15259 732 aa15.49■□□□□ 0.07
TRIM39-207ENST00000428404 CIAO1O76071 339 aa15.49■□□□□ 0.07
TRIM39-207ENST00000428404 ANKRD45Q5TZF3 282 aa15.49■□□□□ 0.07
TRIM39-207ENST00000428404 ATG9AQ7Z3C6 839 aa15.49■□□□□ 0.07
TRIM39-207ENST00000428404 CHD1LQ86WJ1 897 aa15.49■□□□□ 0.07
TRIM39-207ENST00000428404 ZNF594Q96JF6 807 aaPredicted RBP15.49■□□□□ 0.07
TRIM39-207ENST00000428404 SEC31BQ9NQW1 1179 aa15.49■□□□□ 0.07
TRIM39-207ENST00000428404 EYA2O00167 538 aa15.48■□□□□ 0.07
TRIM39-207ENST00000428404 SASH1O94885 1247 aa15.48■□□□□ 0.07
TRIM39-207ENST00000428404 G3BP1Q13283 466 aaKnown RBP eCLIP15.48■□□□□ 0.07
TRIM39-207ENST00000428404 MTFR1LQ9H019 292 aa15.48■□□□□ 0.07
TRIM39-207ENST00000428404 HOXA10P31260 410 aaPredicted RBP15.47■□□□□ 0.07
TRIM39-207ENST00000428404 ERC1Q8IUD2 1116 aa15.47■□□□□ 0.07
TRIM39-207ENST00000428404 RHPN1Q8TCX5 695 aa15.47■□□□□ 0.07
TRIM39-207ENST00000428404 KIF1BPQ96EK5 621 aa15.47■□□□□ 0.07
TRIM39-207ENST00000428404 PUS3Q9BZE2 481 aaKnown RBP15.47■□□□□ 0.07
TRIM39-207ENST00000428404 LRRCC1Q9C099 1032 aa15.47■□□□□ 0.07
TRIM39-207ENST00000428404 SIL1Q9H173 461 aa15.47■□□□□ 0.07
TRIM39-207ENST00000428404 RIPOR2Q9Y4F9 1068 aa15.47■□□□□ 0.07
TRIM39-207ENST00000428404 ZBTB7AO95365 584 aa15.46■□□□□ 0.07
TRIM39-207ENST00000428404 PDE4AP27815 886 aa15.46■□□□□ 0.07
TRIM39-207ENST00000428404 IL15P40933 162 aaPredicted RBP15.46■□□□□ 0.07
TRIM39-207ENST00000428404 LRRC24Q50LG9 513 aa15.46■□□□□ 0.07
TRIM39-207ENST00000428404 TNRC6CQ9HCJ0 1690 aaKnown RBP15.45■□□□□ 0.06
TRIM39-207ENST00000428404 PSDA5PKW4 1024 aaPredicted RBP15.45■□□□□ 0.06
TRIM39-207ENST00000428404 APBB1O00213 710 aa15.45■□□□□ 0.06
TRIM39-207ENST00000428404 SMARCA5O60264 1052 aaPredicted RBP15.45■□□□□ 0.06
TRIM39-207ENST00000428404 PDE6BP35913 854 aa15.45■□□□□ 0.06
TRIM39-207ENST00000428404 OS9Q13438 667 aaPredicted RBP15.45■□□□□ 0.06
TRIM39-207ENST00000428404 TAF7LQ5H9L4 462 aa15.45■□□□□ 0.06
TRIM39-207ENST00000428404 LDHAL6AQ6ZMR3 332 aa15.45■□□□□ 0.06
TRIM39-207ENST00000428404 CDC5LQ99459 802 aaKnown RBP15.45■□□□□ 0.06
TRIM39-207ENST00000428404 SGIP1Q9BQI5 828 aa15.45■□□□□ 0.06
TRIM39-207ENST00000428404 LNPKQ9C0E8 428 aa15.45■□□□□ 0.06
TRIM39-207ENST00000428404 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.45■□□□□ 0.06
TRIM39-207ENST00000428404 RPS8P62241 208 aaKnown RBP15.44■□□□□ 0.06
TRIM39-207ENST00000428404 DDX46Q7L014 1031 aaKnown RBP15.44■□□□□ 0.06
TRIM39-207ENST00000428404 SKAP1Q86WV1 359 aa15.44■□□□□ 0.06
TRIM39-207ENST00000428404 CELF1Q92879 486 aaKnown RBP15.44■□□□□ 0.06
TRIM39-207ENST00000428404 CRAMP1Q96RY5 1269 aa15.44■□□□□ 0.06
TRIM39-207ENST00000428404 BSDC1Q9NW68 430 aaPredicted RBP15.44■□□□□ 0.06
TRIM39-207ENST00000428404 ATF5Q9Y2D1 282 aaPredicted RBP15.44■□□□□ 0.06
TRIM39-207ENST00000428404 LRP5O75197 1615 aa15.43■□□□□ 0.06
TRIM39-207ENST00000428404 SRGNP10124 158 aa15.43■□□□□ 0.06
TRIM39-207ENST00000428404 TFCP2Q12800 502 aa15.43■□□□□ 0.06
TRIM39-207ENST00000428404 ANKRD18AQ8IVF6 992 aa15.43■□□□□ 0.06
TRIM39-207ENST00000428404 C16orf71Q8IYS4 520 aaPredicted RBP15.43■□□□□ 0.06
TRIM39-207ENST00000428404 COL4A1P02462 1669 aa15.43■□□□□ 0.06
TRIM39-207ENST00000428404 ANKRD31Q8N7Z5 1873 aa15.43■□□□□ 0.06
TRIM39-207ENST00000428404 C10orf71Q711Q0 1435 aa15.43■□□□□ 0.06
TRIM39-207ENST00000428404 NPR1P16066 1061 aa15.42■□□□□ 0.06
TRIM39-207ENST00000428404 IGHMBP2P38935 993 aaKnown RBP15.42■□□□□ 0.06
TRIM39-207ENST00000428404 PTGER2P43116 358 aa15.42■□□□□ 0.06
TRIM39-207ENST00000428404 GRAPQ13588 217 aa15.42■□□□□ 0.06
TRIM39-207ENST00000428404 GRAPLQ8TC17 118 aaPredicted RBP15.42■□□□□ 0.06
TRIM39-207ENST00000428404 RPGRQ92834 1020 aaKnown RBP15.42■□□□□ 0.06
TRIM39-207ENST00000428404 RBM17Q96I25 401 aaKnown RBP15.42■□□□□ 0.06
TRIM39-207ENST00000428404 MPHOSPH8Q99549 860 aa15.42■□□□□ 0.06
TRIM39-207ENST00000428404 IL1RAPL2Q9NP60 686 aa15.42■□□□□ 0.06
TRIM39-207ENST00000428404 GPR108Q9NPR9 543 aa15.42■□□□□ 0.06
TRIM39-207ENST00000428404 CNNM1Q9NRU3 951 aa15.42■□□□□ 0.06
TRIM39-207ENST00000428404 SALL3Q9BXA9 1300 aa15.42■□□□□ 0.06
TRIM39-207ENST00000428404 POLD1P28340 1107 aa15.41■□□□□ 0.06
TRIM39-207ENST00000428404 VGLL2Q8N8G2 317 aa15.41■□□□□ 0.06
TRIM39-207ENST00000428404 OTUD7AQ8TE49 926 aaPredicted RBP15.41■□□□□ 0.06
TRIM39-207ENST00000428404 EAF2Q96CJ1 260 aaPredicted RBP15.41■□□□□ 0.06
TRIM39-207ENST00000428404 CEP126Q9P2H0 1117 aa15.41■□□□□ 0.06
TRIM39-207ENST00000428404 ZBTB47Q9UFB7 747 aaPredicted RBP15.41■□□□□ 0.06
TRIM39-207ENST00000428404 MROH5Q6ZUA9 1318 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms