RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 ITPK1Q13572 414 aa12.56□□□□□ -0.4
HDAC9-210ENST00000428307 PKP1Q13835 747 aa12.56□□□□□ -0.4
HDAC9-210ENST00000428307 CEP126Q9P2H0 1117 aa12.56□□□□□ -0.4
HDAC9-210ENST00000428307 SLIT2O94813 1529 aa12.55□□□□□ -0.4
HDAC9-210ENST00000428307 A0A1B0GUL7 405 aa12.55□□□□□ -0.4
HDAC9-210ENST00000428307 CPA1P15085 419 aa12.55□□□□□ -0.4
HDAC9-210ENST00000428307 LARP6Q9BRS8 491 aaKnown RBP12.55□□□□□ -0.4
HDAC9-210ENST00000428307 CCDC87Q9NVE4 849 aa12.55□□□□□ -0.4
HDAC9-210ENST00000428307 PLCH1Q4KWH8 1693 aa12.55□□□□□ -0.4
HDAC9-210ENST00000428307 IRS4O14654 1257 aaPredicted RBP12.55□□□□□ -0.4
HDAC9-210ENST00000428307 CSF1RP07333 972 aa12.55□□□□□ -0.4
HDAC9-210ENST00000428307 MCM2P49736 904 aa12.55□□□□□ -0.4
HDAC9-210ENST00000428307 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
HDAC9-210ENST00000428307 KCNQ4P56696 695 aa12.55□□□□□ -0.4
HDAC9-210ENST00000428307 ZNF589Q86UQ0 364 aaPredicted RBP12.55□□□□□ -0.4
HDAC9-210ENST00000428307 GREM2Q9H772 168 aa12.55□□□□□ -0.4
HDAC9-210ENST00000428307 NUP188Q5SRE5 1749 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 CCDC171Q6TFL3 1326 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 CIAO1O76071 339 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 ITGA6P23229 1130 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 ADCK5Q3MIX3 580 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 TTLL11Q8NHH1 800 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 IL17RAQ96F46 866 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 HAUS7Q99871 368 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 UBN2Q6ZU65 1347 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 GOLIM4O00461 696 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 CASTP20810 708 aaKnown RBP12.54□□□□□ -0.4
HDAC9-210ENST00000428307 PLA2G12BQ9BX93 195 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 GPR108Q9NPR9 543 aa12.54□□□□□ -0.4
HDAC9-210ENST00000428307 RBM8AQ9Y5S9 174 aaKnown RBP12.54□□□□□ -0.4
HDAC9-210ENST00000428307 NECTIN1Q15223 517 aa12.53□□□□□ -0.4
HDAC9-210ENST00000428307 LDHAL6AQ6ZMR3 332 aa12.53□□□□□ -0.4
HDAC9-210ENST00000428307 PTF1AQ7RTS3 328 aa12.53□□□□□ -0.4
HDAC9-210ENST00000428307 MAP4K1Q92918 833 aa12.53□□□□□ -0.4
HDAC9-210ENST00000428307 GBP4Q96PP9 640 aa12.53□□□□□ -0.4
HDAC9-210ENST00000428307 SEC62Q99442 399 aaKnown RBP12.53□□□□□ -0.4
HDAC9-210ENST00000428307 GZF1Q9H116 711 aaPredicted RBP12.53□□□□□ -0.4
HDAC9-210ENST00000428307 CWC22Q9HCG8 908 aaKnown RBP12.53□□□□□ -0.4
HDAC9-210ENST00000428307 PALLDQ8WX93 1383 aa12.53□□□□□ -0.4
HDAC9-210ENST00000428307 LRP6O75581 1613 aa12.53□□□□□ -0.4
HDAC9-210ENST00000428307 CTSWP56202 376 aa12.52□□□□□ -0.4
HDAC9-210ENST00000428307 SLFNL1Q499Z3 407 aa12.52□□□□□ -0.4
HDAC9-210ENST00000428307 FAM182BQ5T319 152 aa12.52□□□□□ -0.4
HDAC9-210ENST00000428307 GORABQ5T7V8 394 aa12.52□□□□□ -0.4
HDAC9-210ENST00000428307 ZNF34Q8IZ26 560 aa12.52□□□□□ -0.4
HDAC9-210ENST00000428307 JAKMIP1Q96N16 626 aaKnown RBP12.52□□□□□ -0.4
HDAC9-210ENST00000428307 TRAK2O60296 914 aa12.52□□□□□ -0.41
HDAC9-210ENST00000428307 ZKSCAN1P17029 563 aaPredicted RBP12.52□□□□□ -0.41
HDAC9-210ENST00000428307 ADORA1P30542 326 aa12.52□□□□□ -0.41
HDAC9-210ENST00000428307 VPS72Q15906 364 aa12.52□□□□□ -0.41
HDAC9-210ENST00000428307 CREB3L3Q68CJ9 461 aa12.52□□□□□ -0.41
HDAC9-210ENST00000428307 CDHR2Q9BYE9 1310 aa12.52□□□□□ -0.41
HDAC9-210ENST00000428307 BCL9LQ86UU0 1499 aa12.52□□□□□ -0.41
HDAC9-210ENST00000428307 TJP1Q07157 1748 aa12.52□□□□□ -0.41
HDAC9-210ENST00000428307 JCADQ9P266 1359 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 IFIT1P09914 478 aaKnown RBP12.51□□□□□ -0.41
HDAC9-210ENST00000428307 HCLS1P14317 486 aaPredicted RBP12.51□□□□□ -0.41
HDAC9-210ENST00000428307 AK2P54819 239 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 NUCB2P80303 420 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 FKBP4Q02790 459 aaKnown RBP eCLIP12.51□□□□□ -0.41
HDAC9-210ENST00000428307 FOXD4L5Q5VV16 416 aaPredicted RBP12.51□□□□□ -0.41
HDAC9-210ENST00000428307 SUSD4Q5VX71 490 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 CCDC129Q6ZRS4 1044 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 FOXD4L4Q8WXT5 416 aaPredicted RBP12.51□□□□□ -0.41
HDAC9-210ENST00000428307 PAG1Q9NWQ8 432 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 USP21Q9UK80 565 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 AK9Q5TCS8 1911 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 DDX11L8A8MPP1 907 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 METTL24Q5JXM2 366 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 KBTBD3Q8NAB2 608 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 XAGE2Q96GT9 111 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 TTC14Q96N46 770 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 SNRKQ9NRH2 765 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 CNNM1Q9NRU3 951 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 DOT1LQ8TEK3 1739 aa12.51□□□□□ -0.41
HDAC9-210ENST00000428307 ANKRD18BA2A2Z9 1011 aa12.5□□□□□ -0.41
HDAC9-210ENST00000428307 PDE8AO60658 829 aa12.5□□□□□ -0.41
HDAC9-210ENST00000428307 CUL4AQ13619 759 aa12.5□□□□□ -0.41
HDAC9-210ENST00000428307 COL9A3Q14050 684 aaPredicted RBP12.5□□□□□ -0.41
HDAC9-210ENST00000428307 NRAPQ86VF7 1730 aa12.5□□□□□ -0.41
HDAC9-210ENST00000428307 SMARCC1Q92922 1105 aaPredicted RBP12.5□□□□□ -0.41
HDAC9-210ENST00000428307 AKAP2Q9Y2D5 859 aa12.5□□□□□ -0.41
HDAC9-210ENST00000428307 TAF6LQ9Y6J9 622 aa12.5□□□□□ -0.41
HDAC9-210ENST00000428307 SLC27A2O14975 620 aa12.5□□□□□ -0.41
HDAC9-210ENST00000428307 TAF5LO75529 589 aa12.5□□□□□ -0.41
HDAC9-210ENST00000428307 CAMTA2O94983 1202 aa12.5□□□□□ -0.41
HDAC9-210ENST00000428307 CCDC158Q5M9N0 1113 aa12.5□□□□□ -0.41
HDAC9-210ENST00000428307 SMIM5Q71RC9 77 aa12.5□□□□□ -0.41
HDAC9-210ENST00000428307 FNBP4Q8N3X1 1017 aaPredicted RBP12.5□□□□□ -0.41
HDAC9-210ENST00000428307 RIPOR2Q9Y4F9 1068 aa12.5□□□□□ -0.41
HDAC9-210ENST00000428307 MED23Q9ULK4 1368 aa12.49□□□□□ -0.41
HDAC9-210ENST00000428307 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
HDAC9-210ENST00000428307 RUFY3Q7L099 469 aa12.49□□□□□ -0.41
HDAC9-210ENST00000428307 FBXO3Q9UK99 471 aa12.49□□□□□ -0.41
HDAC9-210ENST00000428307 NIP7Q9Y221 180 aaKnown RBP eCLIP12.49□□□□□ -0.41
HDAC9-210ENST00000428307 ZDHHC9Q9Y397 364 aa12.49□□□□□ -0.41
HDAC9-210ENST00000428307 BAG4O95429 457 aaKnown RBP12.49□□□□□ -0.41
HDAC9-210ENST00000428307 CYP2E1P05181 493 aaPredicted RBP12.49□□□□□ -0.41
HDAC9-210ENST00000428307 TTC39AQ5SRH9 613 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms