RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 CHD4Q14839 1912 aa22.64■■□□□ 1.21
MMP11-202ENST00000428253 FER1L6Q2WGJ9 1857 aa22.63■■□□□ 1.21
MMP11-202ENST00000428253 CCT4P50991 539 aaKnown RBP22.63■■□□□ 1.21
MMP11-202ENST00000428253 INTS3Q68E01 1043 aaKnown RBP22.63■■□□□ 1.21
MMP11-202ENST00000428253 USP44Q9H0E7 712 aa22.63■■□□□ 1.21
MMP11-202ENST00000428253 TNNQ9UQP3 1299 aa22.63■■□□□ 1.21
MMP11-202ENST00000428253 CSF1RP07333 972 aa22.62■■□□□ 1.21
MMP11-202ENST00000428253 NBPF7P0C2Y1 421 aaPredicted RBP22.62■■□□□ 1.21
MMP11-202ENST00000428253 FOXO4P98177 505 aa22.62■■□□□ 1.21
MMP11-202ENST00000428253 DDX46Q7L014 1031 aaKnown RBP22.62■■□□□ 1.21
MMP11-202ENST00000428253 RTL9Q8NET4 1388 aa22.62■■□□□ 1.21
MMP11-202ENST00000428253 BBOX1O75936 387 aa22.61■■□□□ 1.21
MMP11-202ENST00000428253 GRAPQ13588 217 aa22.61■■□□□ 1.21
MMP11-202ENST00000428253 CCDC152Q4G0S7 254 aa22.61■■□□□ 1.21
MMP11-202ENST00000428253 ZKSCAN2Q63HK3 967 aa22.61■■□□□ 1.21
MMP11-202ENST00000428253 ARHGAP27Q6ZUM4 889 aa22.61■■□□□ 1.21
MMP11-202ENST00000428253 GRAPLQ8TC17 118 aaPredicted RBP22.61■■□□□ 1.21
MMP11-202ENST00000428253 FRAT1Q92837 279 aaPredicted RBP22.61■■□□□ 1.21
MMP11-202ENST00000428253 KAZALD1Q96I82 304 aa22.61■■□□□ 1.21
MMP11-202ENST00000428253 C9orf78Q9NZ63 289 aaPredicted RBP22.61■■□□□ 1.21
MMP11-202ENST00000428253 RCAN3Q9UKA8 241 aa22.61■■□□□ 1.21
MMP11-202ENST00000428253 NFKBIEO00221 500 aa22.6■■□□□ 1.21
MMP11-202ENST00000428253 EPHA10Q5JZY3 1008 aa22.6■■□□□ 1.21
MMP11-202ENST00000428253 SOGA3Q5TF21 947 aa22.6■■□□□ 1.21
MMP11-202ENST00000428253 OLFM4Q6UX06 510 aa22.6■■□□□ 1.21
MMP11-202ENST00000428253 SLC51AQ86UW1 340 aa22.6■■□□□ 1.21
MMP11-202ENST00000428253 CELF1Q92879 486 aaKnown RBP22.6■■□□□ 1.21
MMP11-202ENST00000428253 SEC31BQ9NQW1 1179 aa22.6■■□□□ 1.21
MMP11-202ENST00000428253 ZNF219Q9P2Y4 722 aaPredicted RBP22.59■■□□□ 1.21
MMP11-202ENST00000428253 SBF1O95248 1867 aa22.59■■□□□ 1.21
MMP11-202ENST00000428253 PPEF1O14829 653 aaPredicted RBP22.58■■□□□ 1.21
MMP11-202ENST00000428253 PRELPP51888 382 aa22.58■■□□□ 1.21
MMP11-202ENST00000428253 CC2D2BQ6DHV5 1058 aa22.58■■□□□ 1.21
MMP11-202ENST00000428253 SUCLG2Q96I99 432 aa22.58■■□□□ 1.21
MMP11-202ENST00000428253 GREM2Q9H772 168 aa22.58■■□□□ 1.21
MMP11-202ENST00000428253 ATP6V0A2Q9Y487 856 aa22.58■■□□□ 1.21
MMP11-202ENST00000428253 LTBP3Q9NS15 1303 aa22.57■■□□□ 1.2
MMP11-202ENST00000428253 LRRC37AA6NMS7 1700 aa22.57■■□□□ 1.2
MMP11-202ENST00000428253 CCDC93Q567U6 631 aa22.57■■□□□ 1.2
MMP11-202ENST00000428253 RPS8P62241 208 aaKnown RBP22.56■■□□□ 1.2
MMP11-202ENST00000428253 TMC4Q7Z404 712 aa22.56■■□□□ 1.2
MMP11-202ENST00000428253 SP8Q8IXZ3 490 aa22.56■■□□□ 1.2
MMP11-202ENST00000428253 CLUAP1Q96AJ1 413 aa22.56■■□□□ 1.2
MMP11-202ENST00000428253 CCDC85AQ96PX6 553 aaPredicted RBP22.56■■□□□ 1.2
MMP11-202ENST00000428253 RLBP1P12271 317 aa22.55■■□□□ 1.2
MMP11-202ENST00000428253 RASSF7Q02833 373 aa22.55■■□□□ 1.2
MMP11-202ENST00000428253 RABL6Q3YEC7 729 aaPredicted RBP22.55■■□□□ 1.2
MMP11-202ENST00000428253 RTKN2Q8IZC4 609 aa22.55■■□□□ 1.2
MMP11-202ENST00000428253 GRIPAP1Q4V328 841 aa22.54■■□□□ 1.2
MMP11-202ENST00000428253 TMEM57Q8N5G2 664 aa22.54■■□□□ 1.2
MMP11-202ENST00000428253 FAM161AQ3B820 660 aa22.53■■□□□ 1.2
MMP11-202ENST00000428253 LMBR1LQ6UX01 489 aa22.53■■□□□ 1.2
MMP11-202ENST00000428253 DZIP1LQ8IYY4 767 aaKnown RBP22.53■■□□□ 1.2
MMP11-202ENST00000428253 ANKRD44Q8N8A2 993 aa22.53■■□□□ 1.2
MMP11-202ENST00000428253 PSMD1Q99460 953 aa22.53■■□□□ 1.2
MMP11-202ENST00000428253 MEIS3Q99687 375 aa22.53■■□□□ 1.2
MMP11-202ENST00000428253 CCDC88AQ3V6T2 1871 aa22.52■■□□□ 1.2
MMP11-202ENST00000428253 ITGA6P23229 1130 aa22.52■■□□□ 1.2
MMP11-202ENST00000428253 FKBP4Q02790 459 aaKnown RBP eCLIP22.52■■□□□ 1.2
MMP11-202ENST00000428253 TAOK3Q9H2K8 898 aa22.52■■□□□ 1.2
MMP11-202ENST00000428253 BICC1Q9H694 974 aaKnown RBP22.52■■□□□ 1.2
MMP11-202ENST00000428253 LTBP1Q14766 1721 aa22.51■■□□□ 1.19
MMP11-202ENST00000428253 CDC5LQ99459 802 aaKnown RBP22.51■■□□□ 1.19
MMP11-202ENST00000428253 LMNB1P20700 586 aa22.5■■□□□ 1.19
MMP11-202ENST00000428253 ANKRD18AQ8IVF6 992 aa22.5■■□□□ 1.19
MMP11-202ENST00000428253 RTFDC1Q9BY42 306 aaPredicted RBP22.5■■□□□ 1.19
MMP11-202ENST00000428253 DICER1Q9UPY3 1922 aaKnown RBP22.49■■□□□ 1.19
MMP11-202ENST00000428253 UBTFL1P0CB47 393 aaPredicted RBP22.49■■□□□ 1.19
MMP11-202ENST00000428253 C9orf131Q5VYM1 1079 aa22.49■■□□□ 1.19
MMP11-202ENST00000428253 BSDC1Q9NW68 430 aaPredicted RBP22.49■■□□□ 1.19
MMP11-202ENST00000428253 DUOX1Q9NRD9 1551 aa22.49■■□□□ 1.19
MMP11-202ENST00000428253 PLIN1O60240 522 aa22.48■■□□□ 1.19
MMP11-202ENST00000428253 ANKRD18BA2A2Z9 1011 aa22.47■■□□□ 1.19
MMP11-202ENST00000428253 GNAI3P08754 354 aa22.47■■□□□ 1.19
MMP11-202ENST00000428253 IFIT5Q13325 482 aaKnown RBP22.47■■□□□ 1.19
MMP11-202ENST00000428253 FTSJ3Q8IY81 847 aaKnown RBP22.47■■□□□ 1.19
MMP11-202ENST00000428253 MPNDQ8N594 471 aa22.47■■□□□ 1.19
MMP11-202ENST00000428253 PANK1Q8TE04 598 aa22.47■■□□□ 1.19
MMP11-202ENST00000428253 PODXL2Q9NZ53 605 aa22.47■■□□□ 1.19
MMP11-202ENST00000428253 SPEF2Q9C093 1822 aa22.47■■□□□ 1.19
MMP11-202ENST00000428253 MS4A1P11836 297 aa22.46■■□□□ 1.19
MMP11-202ENST00000428253 YY1P25490 414 aa22.46■■□□□ 1.19
MMP11-202ENST00000428253 RNF181Q9P0P0 153 aa22.46■■□□□ 1.19
MMP11-202ENST00000428253 LRRFIP2Q9Y608 721 aaKnown RBP22.46■■□□□ 1.19
MMP11-202ENST00000428253 ZBTB7BO15156 539 aaPredicted RBP22.45■■□□□ 1.18
MMP11-202ENST00000428253 GPSM2P81274 684 aa22.45■■□□□ 1.18
MMP11-202ENST00000428253 TMX4Q9H1E5 349 aaPredicted RBP22.45■■□□□ 1.18
MMP11-202ENST00000428253 ZNF277Q9NRM2 450 aaPredicted RBP22.45■■□□□ 1.18
MMP11-202ENST00000428253 MINPP1Q9UNW1 487 aa22.45■■□□□ 1.18
MMP11-202ENST00000428253 HDAC5Q9UQL6 1122 aa22.45■■□□□ 1.18
MMP11-202ENST00000428253 IGHMBP2P38935 993 aaKnown RBP22.44■■□□□ 1.18
MMP11-202ENST00000428253 CCDC57Q2TAC2 916 aa22.44■■□□□ 1.18
MMP11-202ENST00000428253 DPP8Q6V1X1 898 aaPredicted RBP22.44■■□□□ 1.18
MMP11-202ENST00000428253 VPS33BQ9H267 617 aa22.44■■□□□ 1.18
MMP11-202ENST00000428253 CHMP3Q9Y3E7 222 aa22.44■■□□□ 1.18
MMP11-202ENST00000428253 COL4A5P29400 1685 aa22.43■■□□□ 1.18
MMP11-202ENST00000428253 ZC3H4Q9UPT8 1303 aaKnown RBP22.43■■□□□ 1.18
MMP11-202ENST00000428253 IARSP41252 1262 aaKnown RBP22.43■■□□□ 1.18
MMP11-202ENST00000428253 RFX5P48382 616 aaPredicted RBP22.43■■□□□ 1.18
MMP11-202ENST00000428253 PDE3AQ14432 1141 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms