RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 PIM2Q9P1W9 311 aa16.15■□□□□ 0.18
CCHCR1-205ENST00000428174 TNRC6CQ9HCJ0 1690 aaKnown RBP16.14■□□□□ 0.18
CCHCR1-205ENST00000428174 HOXA10P31260 410 aaPredicted RBP16.14■□□□□ 0.17
CCHCR1-205ENST00000428174 FOXO4P98177 505 aa16.14■□□□□ 0.17
CCHCR1-205ENST00000428174 DDX46Q7L014 1031 aaKnown RBP16.14■□□□□ 0.17
CCHCR1-205ENST00000428174 TTLL11Q8NHH1 800 aa16.14■□□□□ 0.17
CCHCR1-205ENST00000428174 KAZALD1Q96I82 304 aa16.14■□□□□ 0.17
CCHCR1-205ENST00000428174 CCDC85AQ96PX6 553 aaPredicted RBP16.14■□□□□ 0.17
CCHCR1-205ENST00000428174 CHMP4BQ9H444 224 aaKnown RBP16.14■□□□□ 0.17
CCHCR1-205ENST00000428174 DDX60Q8IY21 1712 aaKnown RBP16.14■□□□□ 0.17
CCHCR1-205ENST00000428174 GNAI2P04899 355 aa16.13■□□□□ 0.17
CCHCR1-205ENST00000428174 CSF1RP07333 972 aa16.13■□□□□ 0.17
CCHCR1-205ENST00000428174 ALDH1B1P30837 517 aa16.13■□□□□ 0.17
CCHCR1-205ENST00000428174 LMBR1LQ6UX01 489 aa16.13■□□□□ 0.17
CCHCR1-205ENST00000428174 CNKSR1Q969H4 720 aa16.13■□□□□ 0.17
CCHCR1-205ENST00000428174 CRAMP1Q96RY5 1269 aa16.13■□□□□ 0.17
CCHCR1-205ENST00000428174 BICC1Q9H694 974 aaKnown RBP16.13■□□□□ 0.17
CCHCR1-205ENST00000428174 CHMP3Q9Y3E7 222 aa16.13■□□□□ 0.17
CCHCR1-205ENST00000428174 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
CCHCR1-205ENST00000428174 DALRD3Q5D0E6 543 aaKnown RBP16.12■□□□□ 0.17
CCHCR1-205ENST00000428174 TTLL6Q8N841 843 aa16.12■□□□□ 0.17
CCHCR1-205ENST00000428174 WWC3Q9ULE0 1092 aa16.12■□□□□ 0.17
CCHCR1-205ENST00000428174 LAMB2P55268 1798 aa16.12■□□□□ 0.17
CCHCR1-205ENST00000428174 RABL6Q3YEC7 729 aaPredicted RBP16.11■□□□□ 0.17
CCHCR1-205ENST00000428174 ANKRD44Q8N8A2 993 aa16.11■□□□□ 0.17
CCHCR1-205ENST00000428174 GREM2Q9H772 168 aa16.11■□□□□ 0.17
CCHCR1-205ENST00000428174 SEC31BQ9NQW1 1179 aa16.11■□□□□ 0.17
CCHCR1-205ENST00000428174 KIAA1551Q9HCM1 1747 aa16.11■□□□□ 0.17
CCHCR1-205ENST00000428174 GRAPQ13588 217 aa16.1■□□□□ 0.17
CCHCR1-205ENST00000428174 FAM161AQ3B820 660 aa16.1■□□□□ 0.17
CCHCR1-205ENST00000428174 GRAPLQ8TC17 118 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-205ENST00000428174 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
CCHCR1-205ENST00000428174 BCS1LQ9Y276 419 aa16.1■□□□□ 0.17
CCHCR1-205ENST00000428174 COL11A2P13942 1736 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-205ENST00000428174 RTL9Q8NET4 1388 aa16.1■□□□□ 0.17
CCHCR1-205ENST00000428174 ANKRD18BA2A2Z9 1011 aa16.09■□□□□ 0.17
CCHCR1-205ENST00000428174 ITGA6P23229 1130 aa16.09■□□□□ 0.17
CCHCR1-205ENST00000428174 IFIT5Q13325 482 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-205ENST00000428174 PRPF40BQ6NWY9 871 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-205ENST00000428174 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-205ENST00000428174 CELF1Q92879 486 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-205ENST00000428174 CDC5LQ99459 802 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-205ENST00000428174 C1orf115Q9H7X2 142 aa16.09■□□□□ 0.17
CCHCR1-205ENST00000428174 ZBTB40Q9NUA8 1239 aa16.09■□□□□ 0.17
CCHCR1-205ENST00000428174 BBOX1O75936 387 aa16.08■□□□□ 0.16
CCHCR1-205ENST00000428174 RPS8P62241 208 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-205ENST00000428174 CCDC57Q2TAC2 916 aa16.08■□□□□ 0.16
CCHCR1-205ENST00000428174 ANKRD18AQ8IVF6 992 aa16.08■□□□□ 0.16
CCHCR1-205ENST00000428174 MYH3P11055 1940 aa16.07■□□□□ 0.16
CCHCR1-205ENST00000428174 PPEF1O14829 653 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-205ENST00000428174 TAF7LQ5H9L4 462 aa16.07■□□□□ 0.16
CCHCR1-205ENST00000428174 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-205ENST00000428174 DLEC1Q9Y238 1755 aa16.07■□□□□ 0.16
CCHCR1-205ENST00000428174 SRCAPQ6ZRS2 3230 aa16.06■□□□□ 0.16
CCHCR1-205ENST00000428174 IGHMBP2P38935 993 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-205ENST00000428174 GPR162Q16538 588 aa16.06■□□□□ 0.16
CCHCR1-205ENST00000428174 TMC4Q7Z404 712 aa16.06■□□□□ 0.16
CCHCR1-205ENST00000428174 TMX4Q9H1E5 349 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-205ENST00000428174 C21orf2O43822 256 aa16.05■□□□□ 0.16
CCHCR1-205ENST00000428174 MTX1Q13505 466 aa16.05■□□□□ 0.16
CCHCR1-205ENST00000428174 MPHOSPH8Q99549 860 aa16.05■□□□□ 0.16
CCHCR1-205ENST00000428174 SLX4Q8IY92 1834 aa16.04■□□□□ 0.16
CCHCR1-205ENST00000428174 SRGAP3O43295 1099 aa16.04■□□□□ 0.16
CCHCR1-205ENST00000428174 IRX6P78412 446 aaPredicted RBP16.04■□□□□ 0.16
CCHCR1-205ENST00000428174 ATP8B2P98198 1209 aa16.04■□□□□ 0.16
CCHCR1-205ENST00000428174 SOGA3Q5TF21 947 aa16.04■□□□□ 0.16
CCHCR1-205ENST00000428174 CC2D2BQ6DHV5 1058 aa16.04■□□□□ 0.16
CCHCR1-205ENST00000428174 SP8Q8IXZ3 490 aa16.04■□□□□ 0.16
CCHCR1-205ENST00000428174 C7orf43Q8WVR3 580 aa16.04■□□□□ 0.16
CCHCR1-205ENST00000428174 ZNF594Q96JF6 807 aaPredicted RBP16.04■□□□□ 0.16
CCHCR1-205ENST00000428174 ATP6V0A2Q9Y487 856 aa16.04■□□□□ 0.16
CCHCR1-205ENST00000428174 BRCA1P38398 1863 aaKnown RBP16.03■□□□□ 0.16
CCHCR1-205ENST00000428174 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
CCHCR1-205ENST00000428174 YBX3P16989 372 aaKnown RBP eCLIP16.03■□□□□ 0.16
CCHCR1-205ENST00000428174 RFX5P48382 616 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-205ENST00000428174 CEP85Q6P2H3 762 aa16.03■□□□□ 0.16
CCHCR1-205ENST00000428174 EXOC6Q8TAG9 804 aa16.03■□□□□ 0.16
CCHCR1-205ENST00000428174 BSDC1Q9NW68 430 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-205ENST00000428174 PNMA6EA0A0J9YXQ4 647 aa16.02■□□□□ 0.16
CCHCR1-205ENST00000428174 PTPN12Q05209 780 aaKnown RBP16.02■□□□□ 0.16
CCHCR1-205ENST00000428174 CCDC93Q567U6 631 aa16.02■□□□□ 0.16
CCHCR1-205ENST00000428174 OLFM4Q6UX06 510 aa16.02■□□□□ 0.16
CCHCR1-205ENST00000428174 LDHAL6AQ6ZMR3 332 aa16.02■□□□□ 0.16
CCHCR1-205ENST00000428174 RPAP2Q8IXW5 612 aaPredicted RBP16.02■□□□□ 0.16
CCHCR1-205ENST00000428174 KLHDC4Q8TBB5 520 aa16.02■□□□□ 0.16
CCHCR1-205ENST00000428174 CNNM1Q9NRU3 951 aa16.02■□□□□ 0.16
CCHCR1-205ENST00000428174 TAF1P21675 1872 aa16.01■□□□□ 0.15
CCHCR1-205ENST00000428174 GRIN3BO60391 1043 aa16.01■□□□□ 0.15
CCHCR1-205ENST00000428174 AAMPQ13685 434 aa16.01■□□□□ 0.15
CCHCR1-205ENST00000428174 COL4A1P02462 1669 aa16.01■□□□□ 0.15
CCHCR1-205ENST00000428174 CACNA1SQ13698 1873 aa16■□□□□ 0.15
CCHCR1-205ENST00000428174 HMMRO75330 724 aa16■□□□□ 0.15
CCHCR1-205ENST00000428174 POLA2Q14181 598 aa16■□□□□ 0.15
CCHCR1-205ENST00000428174 GRIPAP1Q4V328 841 aa16■□□□□ 0.15
CCHCR1-205ENST00000428174 ARHGAP27Q6ZUM4 889 aa16■□□□□ 0.15
CCHCR1-205ENST00000428174 SLC51AQ86UW1 340 aa16■□□□□ 0.15
CCHCR1-205ENST00000428174 RTKN2Q8IZC4 609 aa16■□□□□ 0.15
CCHCR1-205ENST00000428174 MPNDQ8N594 471 aa16■□□□□ 0.15
CCHCR1-205ENST00000428174 SSH3Q8TE77 659 aa16■□□□□ 0.15
CCHCR1-205ENST00000428174 COPRSQ9NQ92 184 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms