RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 SLC39A6Q13433 755 aa16.66■□□□□ 0.26
PTPRU-204ENST00000428026 ALS2CR12Q96Q35 445 aa16.66■□□□□ 0.26
PTPRU-204ENST00000428026 ANKIB1Q9P2G1 1089 aa16.66■□□□□ 0.26
PTPRU-204ENST00000428026 ZNF213O14771 459 aa16.66■□□□□ 0.26
PTPRU-204ENST00000428026 NF2P35240 595 aa16.66■□□□□ 0.26
PTPRU-204ENST00000428026 VPS36Q86VN1 386 aa16.66■□□□□ 0.26
PTPRU-204ENST00000428026 ZSCAN29Q8IWY8 852 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-204ENST00000428026 ARFGAP3Q9NP61 516 aa16.66■□□□□ 0.26
PTPRU-204ENST00000428026 ANXA1P04083 346 aa16.66■□□□□ 0.26
PTPRU-204ENST00000428026 SSRP1Q08945 709 aaKnown RBP16.66■□□□□ 0.26
PTPRU-204ENST00000428026 C8orf34Q49A92 452 aa16.66■□□□□ 0.26
PTPRU-204ENST00000428026 IL2RBP14784 551 aa16.65■□□□□ 0.26
PTPRU-204ENST00000428026 TCEANC2Q96MN5 208 aa16.65■□□□□ 0.26
PTPRU-204ENST00000428026 DNAJC25Q9H1X3 360 aa16.65■□□□□ 0.26
PTPRU-204ENST00000428026 USP16Q9Y5T5 823 aa16.65■□□□□ 0.26
PTPRU-204ENST00000428026 LTKP29376 864 aa16.65■□□□□ 0.26
PTPRU-204ENST00000428026 UBASH3AP57075 661 aa16.65■□□□□ 0.26
PTPRU-204ENST00000428026 NAA15Q9BXJ9 866 aaKnown RBP16.65■□□□□ 0.26
PTPRU-204ENST00000428026 TEX13AQ9BXU3 409 aaPredicted RBP16.65■□□□□ 0.26
PTPRU-204ENST00000428026 HYPKQ9NX55 129 aa16.65■□□□□ 0.26
PTPRU-204ENST00000428026 PCDHB15Q9Y5E8 787 aa16.65■□□□□ 0.26
PTPRU-204ENST00000428026 CFAP43Q8NDM7 1665 aa16.65■□□□□ 0.26
PTPRU-204ENST00000428026 ATP5J2-PTCD1G3V325 749 aa16.65■□□□□ 0.26
PTPRU-204ENST00000428026 MYO1BO43795 1136 aa16.65■□□□□ 0.26
PTPRU-204ENST00000428026 RANBP6O60518 1105 aaKnown RBP16.65■□□□□ 0.26
PTPRU-204ENST00000428026 CCDC94Q9BW85 323 aaPredicted RBP16.65■□□□□ 0.26
PTPRU-204ENST00000428026 CETN2P41208 172 aa16.64■□□□□ 0.26
PTPRU-204ENST00000428026 HAND2P61296 217 aa16.64■□□□□ 0.26
PTPRU-204ENST00000428026 EIF4A2Q14240 407 aaKnown RBP16.64■□□□□ 0.26
PTPRU-204ENST00000428026 RPGRQ92834 1020 aaKnown RBP16.64■□□□□ 0.26
PTPRU-204ENST00000428026 IFIT3O14879 490 aaKnown RBP16.64■□□□□ 0.25
PTPRU-204ENST00000428026 ATP6V1AP38606 617 aa16.64■□□□□ 0.25
PTPRU-204ENST00000428026 A0A087WZG4 1122 aa16.64■□□□□ 0.25
PTPRU-204ENST00000428026 ABCC11Q96J66 1382 aa16.64■□□□□ 0.25
PTPRU-204ENST00000428026 CCDC196A0A1B0GTZ2 297 aa16.64■□□□□ 0.25
PTPRU-204ENST00000428026 NOP2P46087 812 aaKnown RBP16.64■□□□□ 0.25
PTPRU-204ENST00000428026 ORC3Q9UBD5 711 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-204ENST00000428026 SPTY2D1Q68D10 685 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-204ENST00000428026 FAM200AQ8TCP9 573 aa16.64■□□□□ 0.25
PTPRU-204ENST00000428026 SLAIN2Q9P270 581 aa16.64■□□□□ 0.25
PTPRU-204ENST00000428026 SDSP20132 328 aa16.63■□□□□ 0.25
PTPRU-204ENST00000428026 SEC63Q9UGP8 760 aaKnown RBP16.63■□□□□ 0.25
PTPRU-204ENST00000428026 SNRPA1P09661 255 aaKnown RBP16.63■□□□□ 0.25
PTPRU-204ENST00000428026 CTCFLQ8NI51 663 aaPredicted RBP16.63■□□□□ 0.25
PTPRU-204ENST00000428026 DACT1Q9NYF0 836 aa16.63■□□□□ 0.25
PTPRU-204ENST00000428026 POLKQ9UBT6 870 aa16.63■□□□□ 0.25
PTPRU-204ENST00000428026 NLRP5P59047 1200 aa16.63■□□□□ 0.25
PTPRU-204ENST00000428026 EVI5LQ96CN4 794 aa16.63■□□□□ 0.25
PTPRU-204ENST00000428026 HSF2BPO75031 334 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 NEBLO76041 1014 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 IFIT5Q13325 482 aaKnown RBP16.62■□□□□ 0.25
PTPRU-204ENST00000428026 AOPEPQ8N6M6 819 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 DRC1Q96MC2 740 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 PHAXQ9H814 394 aaKnown RBP16.62■□□□□ 0.25
PTPRU-204ENST00000428026 N4BP3O15049 544 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 NUCB1Q02818 461 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 CCDC102BQ68D86 513 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 ECHDC1Q9NTX5 307 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 MPHOSPH10O00566 681 aaKnown RBP16.62■□□□□ 0.25
PTPRU-204ENST00000428026 CAPN2P17655 700 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 MICALL1Q8N3F8 863 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 LRRC2Q9BYS8 371 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 SLU7O95391 586 aaKnown RBP16.62■□□□□ 0.25
PTPRU-204ENST00000428026 MICU3Q86XE3 530 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 NEK1Q96PY6 1258 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 RALGAPBQ86X10 1494 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 DESP17661 470 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 DNM1Q05193 864 aaKnown RBP16.62■□□□□ 0.25
PTPRU-204ENST00000428026 CEP112Q8N8E3 955 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 MBIPQ9NS73 344 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 AKAP2Q9Y2D5 859 aa16.62■□□□□ 0.25
PTPRU-204ENST00000428026 POTEJP0CG39 1038 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 IDEP14735 1019 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 PTGS1P23219 599 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 FLIIQ13045 1269 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 CCDC96Q2M329 555 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 SPECC1LQ69YQ0 1117 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 CTAGE15A4D2H0 777 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 GOLIM4O00461 696 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 CTAGE8P0CG41 777 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 CTAGE6Q86UF2 777 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 CTAGE4Q8IX94 777 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 MAP3K2Q9Y2U5 619 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 ABCC1P33527 1531 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.61■□□□□ 0.25
PTPRU-204ENST00000428026 TMEM2Q9UHN6 1383 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 SAMD9Q5K651 1589 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 CCDC194A0A1B0GVG4 234 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 JARID2Q92833 1246 aaPredicted RBP16.61■□□□□ 0.25
PTPRU-204ENST00000428026 MKNK2Q9HBH9 465 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 NPATQ14207 1427 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 TCERG1LQ5VWI1 586 aa16.61■□□□□ 0.25
PTPRU-204ENST00000428026 RRAGDQ9NQL2 400 aaPredicted RBP16.61■□□□□ 0.25
PTPRU-204ENST00000428026 PHACTR2O75167 634 aa16.6■□□□□ 0.25
PTPRU-204ENST00000428026 IARSP41252 1262 aaKnown RBP16.6■□□□□ 0.25
PTPRU-204ENST00000428026 SERPINA10Q9UK55 444 aa16.6■□□□□ 0.25
PTPRU-204ENST00000428026 FGFR1OPO95684 399 aaKnown RBP16.6■□□□□ 0.25
PTPRU-204ENST00000428026 ANAPC15P60006 121 aa16.6■□□□□ 0.25
PTPRU-204ENST00000428026 CCDC40Q4G0X9 1142 aa16.6■□□□□ 0.25
PTPRU-204ENST00000428026 ATRIPQ8WXE1 791 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms