RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 ALKBH8Q96BT7 664 aaKnown RBP8.52□□□□□ -1.05
GCFC2-203ENST00000427862 DMRTB1Q96MA1 342 aa8.52□□□□□ -1.05
GCFC2-203ENST00000427862 FOXD3Q9UJU5 478 aaPredicted RBP8.52□□□□□ -1.05
GCFC2-203ENST00000427862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.52□□□□□ -1.05
GCFC2-203ENST00000427862 TNFRSF21O75509 655 aa8.51□□□□□ -1.05
GCFC2-203ENST00000427862 MX2P20592 715 aa8.51□□□□□ -1.05
GCFC2-203ENST00000427862 INSM1Q01101 510 aaPredicted RBP8.51□□□□□ -1.05
GCFC2-203ENST00000427862 EHHADHQ08426 723 aa8.51□□□□□ -1.05
GCFC2-203ENST00000427862 SLC16A10Q8TF71 515 aa8.51□□□□□ -1.05
GCFC2-203ENST00000427862 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.51□□□□□ -1.05
GCFC2-203ENST00000427862 MMP20O60882 483 aa8.5□□□□□ -1.05
GCFC2-203ENST00000427862 ERCC3P19447 782 aa8.5□□□□□ -1.05
GCFC2-203ENST00000427862 NFKB1P19838 968 aa8.5□□□□□ -1.05
GCFC2-203ENST00000427862 TAGLNQ01995 201 aaKnown RBP8.5□□□□□ -1.05
GCFC2-203ENST00000427862 FMR1Q06787 632 aaKnown RBP eCLIP8.5□□□□□ -1.05
GCFC2-203ENST00000427862 ORC1Q13415 861 aa8.5□□□□□ -1.05
GCFC2-203ENST00000427862 ZNF438Q7Z4V0 828 aa8.5□□□□□ -1.05
GCFC2-203ENST00000427862 BHMTQ93088 406 aa8.5□□□□□ -1.05
GCFC2-203ENST00000427862 CHRDQ9H2X0 955 aa8.5□□□□□ -1.05
GCFC2-203ENST00000427862 MBIPQ9NS73 344 aa8.5□□□□□ -1.05
GCFC2-203ENST00000427862 WIPF1O43516 503 aa8.49□□□□□ -1.05
GCFC2-203ENST00000427862 CYP2E1P05181 493 aaPredicted RBP8.49□□□□□ -1.05
GCFC2-203ENST00000427862 P4HBP07237 508 aaKnown RBP8.49□□□□□ -1.05
GCFC2-203ENST00000427862 BMP4P12644 408 aa8.49□□□□□ -1.05
GCFC2-203ENST00000427862 FBXO33Q7Z6M2 555 aa8.49□□□□□ -1.05
GCFC2-203ENST00000427862 C1orf127Q8N9H9 656 aa8.49□□□□□ -1.05
GCFC2-203ENST00000427862 IRF7Q92985 503 aa8.49□□□□□ -1.05
GCFC2-203ENST00000427862 MAP3K6O95382 1288 aa8.48□□□□□ -1.05
GCFC2-203ENST00000427862 RARAP10276 462 aa8.48□□□□□ -1.05
GCFC2-203ENST00000427862 ZNF468Q5VIY5 522 aaPredicted RBP8.48□□□□□ -1.05
GCFC2-203ENST00000427862 USPL1Q5W0Q7 1092 aa8.48□□□□□ -1.05
GCFC2-203ENST00000427862 SYT9Q86SS6 491 aa8.48□□□□□ -1.05
GCFC2-203ENST00000427862 TTC16Q8NEE8 873 aa8.48□□□□□ -1.05
GCFC2-203ENST00000427862 SETDB2Q96T68 719 aa8.48□□□□□ -1.05
GCFC2-203ENST00000427862 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
GCFC2-203ENST00000427862 ZFYVE28Q9HCC9 887 aa8.48□□□□□ -1.05
GCFC2-203ENST00000427862 ABI2Q9NYB9 513 aaPredicted RBP8.48□□□□□ -1.05
GCFC2-203ENST00000427862 ZBTB42B2RXF5 422 aa8.47□□□□□ -1.05
GCFC2-203ENST00000427862 PCBP4P57723 403 aaKnown RBP8.47□□□□□ -1.05
GCFC2-203ENST00000427862 COL19A1Q14993 1142 aa8.47□□□□□ -1.05
GCFC2-203ENST00000427862 CNTNAP3BQ96NU0 1288 aa8.47□□□□□ -1.05
GCFC2-203ENST00000427862 CNTNAP3Q9BZ76 1288 aa8.47□□□□□ -1.05
GCFC2-203ENST00000427862 TLR7Q9NYK1 1049 aaKnown RBP8.47□□□□□ -1.05
GCFC2-203ENST00000427862 WWC3Q9ULE0 1092 aa8.47□□□□□ -1.05
GCFC2-203ENST00000427862 PRR12Q9ULL5 1215 aa8.47□□□□□ -1.05
GCFC2-203ENST00000427862 IGF1RP08069 1367 aa8.47□□□□□ -1.05
GCFC2-203ENST00000427862 EIF1AYO14602 144 aaKnown RBP8.46□□□□□ -1.06
GCFC2-203ENST00000427862 GMPRP36959 345 aa8.46□□□□□ -1.06
GCFC2-203ENST00000427862 COL13A1Q5TAT6 717 aaPredicted RBP8.46□□□□□ -1.06
GCFC2-203ENST00000427862 OR13H1Q8NG92 308 aa8.46□□□□□ -1.06
GCFC2-203ENST00000427862 PNMA5Q96PV4 448 aa8.46□□□□□ -1.06
GCFC2-203ENST00000427862 CSRNP1Q96S65 589 aa8.46□□□□□ -1.06
GCFC2-203ENST00000427862 MDFIQ99750 246 aa8.46□□□□□ -1.06
GCFC2-203ENST00000427862 EREGO14944 169 aa8.45□□□□□ -1.06
GCFC2-203ENST00000427862 ENOX2Q16206 610 aaKnown RBP8.45□□□□□ -1.06
GCFC2-203ENST00000427862 TTC39BQ5VTQ0 682 aaPredicted RBP8.45□□□□□ -1.06
GCFC2-203ENST00000427862 SNX29Q8TEQ0 813 aa8.45□□□□□ -1.06
GCFC2-203ENST00000427862 PHACTR2O75167 634 aa8.44□□□□□ -1.06
GCFC2-203ENST00000427862 SIN3BO75182 1162 aa8.44□□□□□ -1.06
GCFC2-203ENST00000427862 POLR3DP05423 398 aaPredicted RBP8.44□□□□□ -1.06
GCFC2-203ENST00000427862 ARAFP10398 606 aa8.44□□□□□ -1.06
GCFC2-203ENST00000427862 MAPK8P45983 427 aa8.44□□□□□ -1.06
GCFC2-203ENST00000427862 MAP2K3P46734 347 aa8.44□□□□□ -1.06
GCFC2-203ENST00000427862 SRSF11Q05519 484 aaKnown RBP8.44□□□□□ -1.06
GCFC2-203ENST00000427862 C1orf229Q6ZS94 237 aaPredicted RBP8.44□□□□□ -1.06
GCFC2-203ENST00000427862 DHX32Q7L7V1 743 aaKnown RBP8.44□□□□□ -1.06
GCFC2-203ENST00000427862 FCHSD1Q86WN1 690 aa8.44□□□□□ -1.06
GCFC2-203ENST00000427862 AVENQ9NQS1 362 aaPredicted RBP8.44□□□□□ -1.06
GCFC2-203ENST00000427862 RNF19AQ9NV58 838 aa8.44□□□□□ -1.06
GCFC2-203ENST00000427862 CPNE3O75131 537 aaKnown RBP8.43□□□□□ -1.06
GCFC2-203ENST00000427862 EAPPQ56P03 285 aaPredicted RBP8.43□□□□□ -1.06
GCFC2-203ENST00000427862 ACDQ96AP0 544 aa8.43□□□□□ -1.06
GCFC2-203ENST00000427862 ZNF428Q96B54 188 aa8.43□□□□□ -1.06
GCFC2-203ENST00000427862 DNAJC25Q9H1X3 360 aa8.43□□□□□ -1.06
GCFC2-203ENST00000427862 KANSL3Q9P2N6 904 aa8.43□□□□□ -1.06
GCFC2-203ENST00000427862 SALL4Q9UJQ4 1053 aa8.43□□□□□ -1.06
GCFC2-203ENST00000427862 GGA1Q9UJY5 639 aa8.43□□□□□ -1.06
GCFC2-203ENST00000427862 PNMA6FA0A0J9YX94 578 aa8.42□□□□□ -1.06
GCFC2-203ENST00000427862 RBM47A0AV96 593 aaKnown RBP8.42□□□□□ -1.06
GCFC2-203ENST00000427862 NEURL1BA8MQ27 555 aa8.42□□□□□ -1.06
GCFC2-203ENST00000427862 ADAMTS2O95450 1211 aa8.42□□□□□ -1.06
GCFC2-203ENST00000427862 NEFLP07196 543 aa8.42□□□□□ -1.06
GCFC2-203ENST00000427862 HOXD8P13378 290 aaPredicted RBP8.42□□□□□ -1.06
GCFC2-203ENST00000427862 CES1P23141 567 aa8.42□□□□□ -1.06
GCFC2-203ENST00000427862 TRPM4Q8TD43 1214 aa8.42□□□□□ -1.06
GCFC2-203ENST00000427862 TNFRSF25Q93038 417 aa8.42□□□□□ -1.06
GCFC2-203ENST00000427862 BCL2L13Q9BXK5 485 aa8.42□□□□□ -1.06
GCFC2-203ENST00000427862 IGFLR1Q9H665 355 aa8.42□□□□□ -1.06
GCFC2-203ENST00000427862 DNAJB12Q9NXW2 375 aaKnown RBP8.42□□□□□ -1.06
GCFC2-203ENST00000427862 AMOTL2Q9Y2J4 779 aa8.42□□□□□ -1.06
GCFC2-203ENST00000427862 ADARB2-AS1A8MUL3 147 aa8.41□□□□□ -1.06
GCFC2-203ENST00000427862 KIF4AO95239 1232 aa8.41□□□□□ -1.06
GCFC2-203ENST00000427862 LDHBP07195 334 aaKnown RBP8.41□□□□□ -1.06
GCFC2-203ENST00000427862 PSAPP07602 524 aa8.41□□□□□ -1.06
GCFC2-203ENST00000427862 SLURP2P0DP57 97 aa8.41□□□□□ -1.06
GCFC2-203ENST00000427862 ZNF16P17020 682 aaPredicted RBP8.41□□□□□ -1.06
GCFC2-203ENST00000427862 SOX18P35713 384 aa8.41□□□□□ -1.06
GCFC2-203ENST00000427862 MLLT1Q03111 559 aaPredicted RBP8.41□□□□□ -1.06
GCFC2-203ENST00000427862 NEUROD1Q13562 356 aa8.41□□□□□ -1.06
GCFC2-203ENST00000427862 PMEPA1Q969W9 287 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms