RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PI4KAP1Q8N8J0 262 aa23.64■■□□□ 1.37
GPC1-205ENST00000427506 SUPT20HQ8NEM7 779 aa23.64■■□□□ 1.37
GPC1-205ENST00000427506 PPIP5K2O43314 1243 aa23.63■■□□□ 1.37
GPC1-205ENST00000427506 EXOSC9Q06265 439 aaKnown RBP23.63■■□□□ 1.37
GPC1-205ENST00000427506 NEXNQ0ZGT2 675 aa23.63■■□□□ 1.37
GPC1-205ENST00000427506 TMC4Q7Z404 712 aa23.63■■□□□ 1.37
GPC1-205ENST00000427506 MPNDQ8N594 471 aa23.63■■□□□ 1.37
GPC1-205ENST00000427506 MYH16Q9H6N6 1097 aa23.63■■□□□ 1.37
GPC1-205ENST00000427506 DDX60Q8IY21 1712 aaKnown RBP23.62■■□□□ 1.37
GPC1-205ENST00000427506 PCCAP05165 728 aaPredicted RBP23.62■■□□□ 1.37
GPC1-205ENST00000427506 G2E3Q7L622 706 aa23.62■■□□□ 1.37
GPC1-205ENST00000427506 NIM1KQ8IY84 436 aa23.62■■□□□ 1.37
GPC1-205ENST00000427506 L3MBTL3Q96JM7 780 aaPredicted RBP23.62■■□□□ 1.37
GPC1-205ENST00000427506 AOC3Q16853 763 aa23.61■■□□□ 1.37
GPC1-205ENST00000427506 JARID2Q92833 1246 aaPredicted RBP23.61■■□□□ 1.37
GPC1-205ENST00000427506 GJA3Q9Y6H8 435 aa23.61■■□□□ 1.37
GPC1-205ENST00000427506 VAMP4O75379 141 aa23.6■■□□□ 1.37
GPC1-205ENST00000427506 GPC2Q8N158 579 aa23.6■■□□□ 1.37
GPC1-205ENST00000427506 CELF1Q92879 486 aaKnown RBP23.6■■□□□ 1.37
GPC1-205ENST00000427506 VPS33BQ9H267 617 aa23.6■■□□□ 1.37
GPC1-205ENST00000427506 SPINK5Q9NQ38 1064 aaPredicted RBP23.6■■□□□ 1.37
GPC1-205ENST00000427506 FLIIQ13045 1269 aa23.59■■□□□ 1.37
GPC1-205ENST00000427506 RTFDC1Q9BY42 306 aaPredicted RBP23.59■■□□□ 1.37
GPC1-205ENST00000427506 HACL1Q9UJ83 578 aa23.59■■□□□ 1.37
GPC1-205ENST00000427506 PDE8AO60658 829 aa23.58■■□□□ 1.37
GPC1-205ENST00000427506 FKBP5Q13451 457 aaPredicted RBP23.58■■□□□ 1.37
GPC1-205ENST00000427506 TAF1DQ9H5J8 278 aaPredicted RBP23.58■■□□□ 1.37
GPC1-205ENST00000427506 COL4A5P29400 1685 aa23.57■■□□□ 1.36
GPC1-205ENST00000427506 IGKV5-2P06315 115 aa23.57■■□□□ 1.36
GPC1-205ENST00000427506 POTEIP0CG38 1075 aa23.57■■□□□ 1.36
GPC1-205ENST00000427506 POTEJP0CG39 1038 aa23.57■■□□□ 1.36
GPC1-205ENST00000427506 CCDC152Q4G0S7 254 aa23.57■■□□□ 1.36
GPC1-205ENST00000427506 EAPPQ56P03 285 aaPredicted RBP23.57■■□□□ 1.36
GPC1-205ENST00000427506 CHADLQ6NUI6 762 aa23.57■■□□□ 1.36
GPC1-205ENST00000427506 RPS8P62241 208 aaKnown RBP23.56■■□□□ 1.36
GPC1-205ENST00000427506 HTRA3P83110 453 aa23.56■■□□□ 1.36
GPC1-205ENST00000427506 CWF19L2Q2TBE0 894 aaKnown RBP23.56■■□□□ 1.36
GPC1-205ENST00000427506 CCDC85AQ96PX6 553 aaPredicted RBP23.56■■□□□ 1.36
GPC1-205ENST00000427506 NSFL1CQ9UNZ2 370 aaKnown RBP23.56■■□□□ 1.36
GPC1-205ENST00000427506 TAF1P21675 1872 aa23.56■■□□□ 1.36
GPC1-205ENST00000427506 LMOD1P29536 600 aaPredicted RBP23.55■■□□□ 1.36
GPC1-205ENST00000427506 EPHX2P34913 555 aa23.55■■□□□ 1.36
GPC1-205ENST00000427506 SEC31BQ9NQW1 1179 aa23.55■■□□□ 1.36
GPC1-205ENST00000427506 CLEC11AQ9Y240 323 aa23.55■■□□□ 1.36
GPC1-205ENST00000427506 SCN4AP35499 1836 aa23.54■■□□□ 1.36
GPC1-205ENST00000427506 NEURL1BA8MQ27 555 aa23.54■■□□□ 1.36
GPC1-205ENST00000427506 KIAA2012Q0VF49 1180 aa23.54■■□□□ 1.36
GPC1-205ENST00000427506 LDHDQ86WU2 507 aa23.54■■□□□ 1.36
GPC1-205ENST00000427506 ZNRF3Q9ULT6 936 aa23.54■■□□□ 1.36
GPC1-205ENST00000427506 CDHR2Q9BYE9 1310 aa23.54■■□□□ 1.36
GPC1-205ENST00000427506 PNMA8AQ86V59 439 aaPredicted RBP23.53■■□□□ 1.36
GPC1-205ENST00000427506 DNAAF4Q8WXU2 420 aa23.53■■□□□ 1.36
GPC1-205ENST00000427506 C6orf229H3BNL8 230 aa23.52■■□□□ 1.36
GPC1-205ENST00000427506 GPSM2P81274 684 aa23.52■■□□□ 1.36
GPC1-205ENST00000427506 WASHC4Q2M389 1173 aa23.51■■□□□ 1.35
GPC1-205ENST00000427506 DNAJC5GQ8N7S2 189 aa23.51■■□□□ 1.35
GPC1-205ENST00000427506 CTSWP56202 376 aa23.5■■□□□ 1.35
GPC1-205ENST00000427506 CXCL9Q07325 125 aa23.5■■□□□ 1.35
GPC1-205ENST00000427506 UBE3BQ7Z3V4 1068 aa23.5■■□□□ 1.35
GPC1-205ENST00000427506 ANKRD18AQ8IVF6 992 aa23.5■■□□□ 1.35
GPC1-205ENST00000427506 ZNF521Q96K83 1311 aa23.5■■□□□ 1.35
GPC1-205ENST00000427506 COL4A1P02462 1669 aa23.49■■□□□ 1.35
GPC1-205ENST00000427506 RIMBP2O15034 1052 aa23.49■■□□□ 1.35
GPC1-205ENST00000427506 GCKRQ14397 625 aa23.49■■□□□ 1.35
GPC1-205ENST00000427506 CIAPIN1Q6FI81 312 aa23.49■■□□□ 1.35
GPC1-205ENST00000427506 LINS1Q8NG48 757 aa23.49■■□□□ 1.35
GPC1-205ENST00000427506 EYA3Q99504 573 aa23.49■■□□□ 1.35
GPC1-205ENST00000427506 ANKIB1Q9P2G1 1089 aa23.49■■□□□ 1.35
GPC1-205ENST00000427506 LRRC37AA6NMS7 1700 aa23.49■■□□□ 1.35
GPC1-205ENST00000427506 CEP350Q5VT06 3117 aa23.48■■□□□ 1.35
GPC1-205ENST00000427506 H7C1W4 665 aa23.48■■□□□ 1.35
GPC1-205ENST00000427506 RAD17O75943 681 aa23.48■■□□□ 1.35
GPC1-205ENST00000427506 SCNN1DP51172 638 aa23.48■■□□□ 1.35
GPC1-205ENST00000427506 TNIP1Q15025 636 aa23.48■■□□□ 1.35
GPC1-205ENST00000427506 CDC5LQ99459 802 aaKnown RBP23.48■■□□□ 1.35
GPC1-205ENST00000427506 POLLQ9UGP5 575 aa23.48■■□□□ 1.35
GPC1-205ENST00000427506 EPS15P42566 896 aa23.47■■□□□ 1.35
GPC1-205ENST00000427506 TTLL11Q8NHH1 800 aa23.47■■□□□ 1.35
GPC1-205ENST00000427506 KLRG1Q96E93 195 aa23.47■■□□□ 1.35
GPC1-205ENST00000427506 DUOX1Q9NRD9 1551 aa23.47■■□□□ 1.35
GPC1-205ENST00000427506 F6X3S4 739 aa23.46■■□□□ 1.35
GPC1-205ENST00000427506 TBC1D16Q8TBP0 767 aa23.46■■□□□ 1.35
GPC1-205ENST00000427506 BCL2L13Q9BXK5 485 aa23.46■■□□□ 1.35
GPC1-205ENST00000427506 E9PSI1 815 aa23.45■■□□□ 1.34
GPC1-205ENST00000427506 CCER2I3L3R5 266 aa23.45■■□□□ 1.34
GPC1-205ENST00000427506 ZC3H12CQ9C0D7 883 aaKnown RBP23.45■■□□□ 1.34
GPC1-205ENST00000427506 GREM2Q9H772 168 aa23.45■■□□□ 1.34
GPC1-205ENST00000427506 DBNDD1Q9H9R9 158 aa23.45■■□□□ 1.34
GPC1-205ENST00000427506 CACNA1FO60840 1977 aa23.44■■□□□ 1.34
GPC1-205ENST00000427506 G3V3G9 751 aa23.44■■□□□ 1.34
GPC1-205ENST00000427506 UFL1O94874 794 aa23.44■■□□□ 1.34
GPC1-205ENST00000427506 GMPSP49915 693 aaPredicted RBP23.44■■□□□ 1.34
GPC1-205ENST00000427506 DCAF8Q5TAQ9 597 aa23.44■■□□□ 1.34
GPC1-205ENST00000427506 MAP1SQ66K74 1059 aaPredicted RBP23.44■■□□□ 1.34
GPC1-205ENST00000427506 GPR101Q96P66 508 aaPredicted RBP23.44■■□□□ 1.34
GPC1-205ENST00000427506 PODXL2Q9NZ53 605 aa23.44■■□□□ 1.34
GPC1-205ENST00000427506 GPRC5DQ9NZD1 345 aa23.44■■□□□ 1.34
GPC1-205ENST00000427506 GGA1Q9UJY5 639 aa23.44■■□□□ 1.34
GPC1-205ENST00000427506 YDJCA8MPS7 323 aa23.43■■□□□ 1.34
GPC1-205ENST00000427506 DOK7Q18PE1 504 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms