RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 ZNF609O15014 1411 aa26.32■■□□□ 1.8
CNEP1R1-202ENST00000427478 DEKP35659 375 aaKnown RBP26.32■■□□□ 1.8
CNEP1R1-202ENST00000427478 EIF5P55010 431 aaKnown RBP26.32■■□□□ 1.8
CNEP1R1-202ENST00000427478 NEUROD6Q96NK8 337 aa26.32■■□□□ 1.8
CNEP1R1-202ENST00000427478 COL5A3P25940 1745 aaPredicted RBP26.31■■□□□ 1.8
CNEP1R1-202ENST00000427478 GPR108Q9NPR9 543 aa26.3■■□□□ 1.8
CNEP1R1-202ENST00000427478 NDUFB9Q9Y6M9 179 aa26.3■■□□□ 1.8
CNEP1R1-202ENST00000427478 CSF1RP07333 972 aa26.3■■□□□ 1.8
CNEP1R1-202ENST00000427478 FNBP4Q8N3X1 1017 aaPredicted RBP26.3■■□□□ 1.8
CNEP1R1-202ENST00000427478 UBN2Q6ZU65 1347 aa26.29■■□□□ 1.8
CNEP1R1-202ENST00000427478 PTH1RQ03431 593 aa26.29■■□□□ 1.8
CNEP1R1-202ENST00000427478 DNAJC2Q99543 621 aaKnown RBP26.29■■□□□ 1.8
CNEP1R1-202ENST00000427478 UPF3BQ9BZI7 483 aaKnown RBP26.29■■□□□ 1.8
CNEP1R1-202ENST00000427478 TRMT112Q9UI30 125 aaKnown RBP26.29■■□□□ 1.8
CNEP1R1-202ENST00000427478 TIMM10P62072 90 aa26.29■■□□□ 1.8
CNEP1R1-202ENST00000427478 TAF7LQ5H9L4 462 aa26.29■■□□□ 1.8
CNEP1R1-202ENST00000427478 SMARCC1Q92922 1105 aaPredicted RBP26.29■■□□□ 1.8
CNEP1R1-202ENST00000427478 SNX14Q9Y5W7 946 aa26.29■■□□□ 1.8
CNEP1R1-202ENST00000427478 A0A0D9SFI3 127 aa26.28■■□□□ 1.8
CNEP1R1-202ENST00000427478 IFIT5Q13325 482 aaKnown RBP26.28■■□□□ 1.8
CNEP1R1-202ENST00000427478 SPATA31A6Q5VVP1 1343 aa26.28■■□□□ 1.8
CNEP1R1-202ENST00000427478 HAUS7Q99871 368 aa26.27■■□□□ 1.8
CNEP1R1-202ENST00000427478 USP21Q9UK80 565 aa26.27■■□□□ 1.8
CNEP1R1-202ENST00000427478 IRS4O14654 1257 aaPredicted RBP26.27■■□□□ 1.8
CNEP1R1-202ENST00000427478 ZNF34Q8IZ26 560 aa26.27■■□□□ 1.8
CNEP1R1-202ENST00000427478 CCDC171Q6TFL3 1326 aa26.26■■□□□ 1.79
CNEP1R1-202ENST00000427478 MCM2P49736 904 aa26.26■■□□□ 1.79
CNEP1R1-202ENST00000427478 CTSWP56202 376 aa26.26■■□□□ 1.79
CNEP1R1-202ENST00000427478 RAB3GAP1Q15042 981 aa26.26■■□□□ 1.79
CNEP1R1-202ENST00000427478 RASEFQ8IZ41 740 aa26.26■■□□□ 1.79
CNEP1R1-202ENST00000427478 A0A1B0GUL7 405 aa26.26■■□□□ 1.79
CNEP1R1-202ENST00000427478 CEP126Q9P2H0 1117 aa26.26■■□□□ 1.79
CNEP1R1-202ENST00000427478 ZNF831Q5JPB2 1677 aa26.25■■□□□ 1.79
CNEP1R1-202ENST00000427478 MCM4P33991 863 aa26.25■■□□□ 1.79
CNEP1R1-202ENST00000427478 TTLL11Q8NHH1 800 aa26.25■■□□□ 1.79
CNEP1R1-202ENST00000427478 TNPO1Q92973 898 aaKnown RBP26.25■■□□□ 1.79
CNEP1R1-202ENST00000427478 GREM2Q9H772 168 aa26.25■■□□□ 1.79
CNEP1R1-202ENST00000427478 FBXO3Q9UK99 471 aa26.25■■□□□ 1.79
CNEP1R1-202ENST00000427478 NOL8Q76FK4 1167 aaKnown RBP26.24■■□□□ 1.79
CNEP1R1-202ENST00000427478 THSD7AQ9UPZ6 1657 aa26.24■■□□□ 1.79
CNEP1R1-202ENST00000427478 MED23Q9ULK4 1368 aa26.24■■□□□ 1.79
CNEP1R1-202ENST00000427478 ITGA6P23229 1130 aa26.24■■□□□ 1.79
CNEP1R1-202ENST00000427478 DDX46Q7L014 1031 aaKnown RBP26.24■■□□□ 1.79
CNEP1R1-202ENST00000427478 TMX3Q96JJ7 454 aa26.24■■□□□ 1.79
CNEP1R1-202ENST00000427478 SNRKQ9NRH2 765 aa26.24■■□□□ 1.79
CNEP1R1-202ENST00000427478 RFX7Q2KHR2 1363 aa26.23■■□□□ 1.79
CNEP1R1-202ENST00000427478 PRPF40BQ6NWY9 871 aaKnown RBP26.23■■□□□ 1.79
CNEP1R1-202ENST00000427478 ZGPATQ8N5A5 531 aaKnown RBP26.23■■□□□ 1.79
CNEP1R1-202ENST00000427478 CAMTA2O94983 1202 aa26.22■■□□□ 1.79
CNEP1R1-202ENST00000427478 BCORQ6W2J9 1755 aa26.22■■□□□ 1.79
CNEP1R1-202ENST00000427478 PDE8AO60658 829 aa26.21■■□□□ 1.79
CNEP1R1-202ENST00000427478 RIC1Q4ADV7 1423 aa26.21■■□□□ 1.79
CNEP1R1-202ENST00000427478 RBM8AQ9Y5S9 174 aaKnown RBP26.21■■□□□ 1.79
CNEP1R1-202ENST00000427478 ANKRD18BA2A2Z9 1011 aa26.21■■□□□ 1.79
CNEP1R1-202ENST00000427478 SUSD4Q5VX71 490 aa26.21■■□□□ 1.79
CNEP1R1-202ENST00000427478 BTAF1O14981 1849 aa26.21■■□□□ 1.79
CNEP1R1-202ENST00000427478 FAM177BA6PVY3 158 aa26.2■■□□□ 1.79
CNEP1R1-202ENST00000427478 ZNF589Q86UQ0 364 aaPredicted RBP26.2■■□□□ 1.79
CNEP1R1-202ENST00000427478 KCNJ4P48050 445 aa26.2■■□□□ 1.78
CNEP1R1-202ENST00000427478 NECTIN1Q15223 517 aa26.2■■□□□ 1.78
CNEP1R1-202ENST00000427478 AKAP2Q9Y2D5 859 aa26.2■■□□□ 1.78
CNEP1R1-202ENST00000427478 GOLIM4O00461 696 aa26.19■■□□□ 1.78
CNEP1R1-202ENST00000427478 CHGBP05060 677 aa26.19■■□□□ 1.78
CNEP1R1-202ENST00000427478 SSFA2P28290 1259 aa26.19■■□□□ 1.78
CNEP1R1-202ENST00000427478 PTF1AQ7RTS3 328 aa26.19■■□□□ 1.78
CNEP1R1-202ENST00000427478 LINC00116Q8NCU8 138 aa26.19■■□□□ 1.78
CNEP1R1-202ENST00000427478 CERKQ8TCT0 537 aa26.19■■□□□ 1.78
CNEP1R1-202ENST00000427478 MAP4K1Q92918 833 aa26.19■■□□□ 1.78
CNEP1R1-202ENST00000427478 PAG1Q9NWQ8 432 aa26.19■■□□□ 1.78
CNEP1R1-202ENST00000427478 DDX60Q8IY21 1712 aaKnown RBP26.19■■□□□ 1.78
CNEP1R1-202ENST00000427478 IFIT1P09914 478 aaKnown RBP26.18■■□□□ 1.78
CNEP1R1-202ENST00000427478 MEX3CQ5U5Q3 659 aaKnown RBP26.18■■□□□ 1.78
CNEP1R1-202ENST00000427478 LDHAL6AQ6ZMR3 332 aa26.18■■□□□ 1.78
CNEP1R1-202ENST00000427478 KBTBD3Q8NAB2 608 aa26.18■■□□□ 1.78
CNEP1R1-202ENST00000427478 CWC22Q9HCG8 908 aaKnown RBP26.18■■□□□ 1.78
CNEP1R1-202ENST00000427478 NHSQ6T4R5 1651 aa26.18■■□□□ 1.78
CNEP1R1-202ENST00000427478 SPEF2Q9C093 1822 aa26.18■■□□□ 1.78
CNEP1R1-202ENST00000427478 ADORA1P30542 326 aa26.18■■□□□ 1.78
CNEP1R1-202ENST00000427478 KCNQ4P56696 695 aa26.18■■□□□ 1.78
CNEP1R1-202ENST00000427478 METTL24Q5JXM2 366 aa26.17■■□□□ 1.78
CNEP1R1-202ENST00000427478 KCNB2Q92953 911 aa26.17■■□□□ 1.78
CNEP1R1-202ENST00000427478 SH3TC1Q8TE82 1336 aa26.17■■□□□ 1.78
CNEP1R1-202ENST00000427478 CASTP20810 708 aaKnown RBP26.17■■□□□ 1.78
CNEP1R1-202ENST00000427478 GSE1Q14687 1217 aa26.17■■□□□ 1.78
CNEP1R1-202ENST00000427478 CREB3L3Q68CJ9 461 aa26.17■■□□□ 1.78
CNEP1R1-202ENST00000427478 XAGE2Q96GT9 111 aa26.17■■□□□ 1.78
CNEP1R1-202ENST00000427478 CNNM1Q9NRU3 951 aa26.17■■□□□ 1.78
CNEP1R1-202ENST00000427478 RIPOR2Q9Y4F9 1068 aa26.17■■□□□ 1.78
CNEP1R1-202ENST00000427478 LAMB2P55268 1798 aa26.16■■□□□ 1.78
CNEP1R1-202ENST00000427478 GORABQ5T7V8 394 aa26.16■■□□□ 1.78
CNEP1R1-202ENST00000427478 TTC14Q96N46 770 aa26.16■■□□□ 1.78
CNEP1R1-202ENST00000427478 UTP14AQ9BVJ6 771 aaKnown RBP26.16■■□□□ 1.78
CNEP1R1-202ENST00000427478 LRP5O75197 1615 aa26.16■■□□□ 1.78
CNEP1R1-202ENST00000427478 HCLS1P14317 486 aaPredicted RBP26.15■■□□□ 1.78
CNEP1R1-202ENST00000427478 CUL4AQ13619 759 aa26.15■■□□□ 1.78
CNEP1R1-202ENST00000427478 ADCK5Q3MIX3 580 aa26.15■■□□□ 1.78
CNEP1R1-202ENST00000427478 FAM182BQ5T319 152 aa26.15■■□□□ 1.78
CNEP1R1-202ENST00000427478 IL27Q8NEV9 243 aa26.15■■□□□ 1.78
CNEP1R1-202ENST00000427478 JAKMIP1Q96N16 626 aaKnown RBP26.15■■□□□ 1.78
CNEP1R1-202ENST00000427478 GBP4Q96PP9 640 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms