RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 FERMT3Q86UX7 667 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 LRPPRCP42704 1394 aaKnown RBP16.43■□□□□ 0.22
PTPN13-203ENST00000427191 PSMA7O14818 248 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 LRSAM1Q6UWE0 723 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 TXNDC16Q9P2K2 825 aa16.43■□□□□ 0.22
PTPN13-203ENST00000427191 CAMSAP2Q08AD1 1489 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
PTPN13-203ENST00000427191 GAS8O95995 478 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 KRT23Q9C075 422 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 TMPOP42166 694 aaKnown RBP16.42■□□□□ 0.22
PTPN13-203ENST00000427191 NCOA7Q8NI08 942 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 VCX3BQ9H321 246 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 SPDYE4A6NLX3 237 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 CIB2O75838 187 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 DNA2P51530 1060 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 SMC1BQ8NDV3 1235 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 B4DLN1 442 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 SYKP43405 635 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 GNAQP50148 359 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 MRPL12P52815 198 aaKnown RBP16.42■□□□□ 0.22
PTPN13-203ENST00000427191 TPD52P55327 224 aaPredicted RBP16.42■□□□□ 0.22
PTPN13-203ENST00000427191 TRIM7Q9C029 511 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 VAV2P52735 878 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 NBPF11Q86T75 865 aa16.42■□□□□ 0.22
PTPN13-203ENST00000427191 TMEM132EQ6IEE7 984 aa16.41■□□□□ 0.22
PTPN13-203ENST00000427191 C10orf67Q8IYJ2 551 aa16.41■□□□□ 0.22
PTPN13-203ENST00000427191 CACNA2D3Q8IZS8 1091 aa16.41■□□□□ 0.22
PTPN13-203ENST00000427191 STMN2Q93045 179 aa16.41■□□□□ 0.22
PTPN13-203ENST00000427191 METAP2P50579 478 aaKnown RBP eCLIP16.41■□□□□ 0.22
PTPN13-203ENST00000427191 CSRNP2Q9H175 543 aa16.41■□□□□ 0.22
PTPN13-203ENST00000427191 KAT14Q9H8E8 782 aa16.41■□□□□ 0.22
PTPN13-203ENST00000427191 LUC7L2Q9Y383 392 aaKnown RBP16.41■□□□□ 0.22
PTPN13-203ENST00000427191 MFSD6Q6ZSS7 791 aa16.41■□□□□ 0.22
PTPN13-203ENST00000427191 RBM25P49756 843 aaKnown RBP16.41■□□□□ 0.22
PTPN13-203ENST00000427191 ATP11AP98196 1134 aa16.41■□□□□ 0.22
PTPN13-203ENST00000427191 CKAP2LQ8IYA6 745 aa16.41■□□□□ 0.22
PTPN13-203ENST00000427191 FAM200AQ8TCP9 573 aa16.41■□□□□ 0.22
PTPN13-203ENST00000427191 IL1RAPL2Q9NP60 686 aa16.41■□□□□ 0.22
PTPN13-203ENST00000427191 ZGPATQ8N5A5 531 aaKnown RBP16.41■□□□□ 0.22
PTPN13-203ENST00000427191 TEX13AQ9BXU3 409 aaPredicted RBP16.41■□□□□ 0.22
PTPN13-203ENST00000427191 APBB1IPQ7Z5R6 666 aaPredicted RBP16.41■□□□□ 0.22
PTPN13-203ENST00000427191 ANKRD24Q8TF21 1146 aa16.41■□□□□ 0.22
PTPN13-203ENST00000427191 GJB2P29033 226 aa16.4■□□□□ 0.22
PTPN13-203ENST00000427191 STAT6P42226 847 aa16.4■□□□□ 0.22
PTPN13-203ENST00000427191 PSMC4P43686 418 aa16.4■□□□□ 0.22
PTPN13-203ENST00000427191 MAP7Q14244 749 aa16.4■□□□□ 0.22
PTPN13-203ENST00000427191 CWC25Q9NXE8 425 aaPredicted RBP16.4■□□□□ 0.22
PTPN13-203ENST00000427191 PPP1R2P41236 205 aa16.4■□□□□ 0.22
PTPN13-203ENST00000427191 ANKLE2Q86XL3 938 aa16.4■□□□□ 0.22
PTPN13-203ENST00000427191 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
PTPN13-203ENST00000427191 PRDM10Q9NQV6 1147 aa16.4■□□□□ 0.22
PTPN13-203ENST00000427191 GPR161Q8N6U8 529 aaKnown RBP16.4■□□□□ 0.22
PTPN13-203ENST00000427191 PRDM11Q9NQV5 511 aa16.4■□□□□ 0.22
PTPN13-203ENST00000427191 TMEM67Q5HYA8 995 aa16.4■□□□□ 0.22
PTPN13-203ENST00000427191 ATRIPQ8WXE1 791 aa16.4■□□□□ 0.22
PTPN13-203ENST00000427191 TAF7Q15545 349 aaPredicted RBP16.4■□□□□ 0.22
PTPN13-203ENST00000427191 BICD1Q96G01 975 aa16.4■□□□□ 0.22
PTPN13-203ENST00000427191 MYO1BO43795 1136 aa16.39■□□□□ 0.21
PTPN13-203ENST00000427191 TNNC1P63316 161 aa16.39■□□□□ 0.21
PTPN13-203ENST00000427191 CFAP157Q5JU67 520 aa16.39■□□□□ 0.21
PTPN13-203ENST00000427191 AFAP1L2Q8N4X5 818 aa16.39■□□□□ 0.21
PTPN13-203ENST00000427191 VCXQ9H320 206 aa16.39■□□□□ 0.21
PTPN13-203ENST00000427191 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.39■□□□□ 0.21
PTPN13-203ENST00000427191 DUSP27Q5VZP5 1158 aa16.39■□□□□ 0.21
PTPN13-203ENST00000427191 CAPN2P17655 700 aa16.39■□□□□ 0.21
PTPN13-203ENST00000427191 CFAP70Q5T0N1 1121 aa16.39■□□□□ 0.21
PTPN13-203ENST00000427191 CPLX3Q8WVH0 158 aa16.39■□□□□ 0.21
PTPN13-203ENST00000427191 PUF60Q9UHX1 559 aaKnown RBP16.39■□□□□ 0.21
PTPN13-203ENST00000427191 EXOC6BQ9Y2D4 811 aa16.39■□□□□ 0.21
PTPN13-203ENST00000427191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.39■□□□□ 0.21
PTPN13-203ENST00000427191 SH2D4BQ5SQS7 431 aa16.39■□□□□ 0.21
PTPN13-203ENST00000427191 NUTM1Q86Y26 1132 aa16.39■□□□□ 0.21
PTPN13-203ENST00000427191 CDC5LQ99459 802 aaKnown RBP16.39■□□□□ 0.21
PTPN13-203ENST00000427191 PUS7Q96PZ0 661 aaKnown RBP16.38■□□□□ 0.21
PTPN13-203ENST00000427191 TMOD3Q9NYL9 352 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 MTUS1Q9ULD2 1270 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 TTC21BQ7Z4L5 1316 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
PTPN13-203ENST00000427191 CPLX4Q7Z7G2 160 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 RPUSD2Q8IZ73 545 aaKnown RBP16.38■□□□□ 0.21
PTPN13-203ENST00000427191 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPN13-203ENST00000427191 RSPH14Q9UHP6 348 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 GBP6Q6ZN66 633 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 GSTA5Q7RTV2 222 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 DDX54Q8TDD1 881 aaKnown RBP16.38■□□□□ 0.21
PTPN13-203ENST00000427191 CABP1Q9NZU7 370 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 IRX3P78415 501 aaPredicted RBP16.38■□□□□ 0.21
PTPN13-203ENST00000427191 CCDC82Q8N4S0 544 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 MIPOL1Q8TD10 442 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 HDXQ7Z353 690 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 IDEP14735 1019 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 POTEDQ86YR6 584 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 PAIP2Q9BPZ3 127 aaKnown RBP16.38■□□□□ 0.21
PTPN13-203ENST00000427191 KIF14Q15058 1648 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 GBP1P32455 592 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 ATL3Q6DD88 541 aa16.38■□□□□ 0.21
PTPN13-203ENST00000427191 RPGRQ92834 1020 aaKnown RBP16.37■□□□□ 0.21
PTPN13-203ENST00000427191 ECHDC1Q9NTX5 307 aa16.37■□□□□ 0.21
PTPN13-203ENST00000427191 DBF4Q9UBU7 674 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms